Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304H01f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4X7T7 Cluster: Putative uncharacterized protein; n=2; ...    33   3.0  
UniRef50_UPI00001B5616 Cluster: hypothetical protein PAB1489.1n;...    32   6.9  
UniRef50_O58315 Cluster: Putative uncharacterized protein PH0602...    32   6.9  
UniRef50_Q5CH32 Cluster: Putative uncharacterized protein; n=2; ...    32   9.2  

>UniRef50_Q4X7T7 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 435

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -1

Query: 491 FTVNFFMYNT*KSHTGIVEMF-HSLKKSAFLTDFKKGGGSQFDCMFFLCLLPHN 333
           F V   MY +   H GIVE F  +LKK+A   D  K G + F+C+  L LL  N
Sbjct: 332 FKVVNIMYYSKIVHKGIVENFVENLKKNANTNDIYK-GNTFFNCLKLLTLLERN 384


>UniRef50_UPI00001B5616 Cluster: hypothetical protein PAB1489.1n;
           n=1; Pyrococcus abyssi GE5|Rep: hypothetical protein
           PAB1489.1n - Pyrococcus abyssi GE5
          Length = 76

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 194 LMQIFILIWFSHGYHYQNWTKLKWDHTGSV 283
           L++  I+ WFS+ + YQN+   KW H G V
Sbjct: 11  LIEALIIGWFSYAFSYQNYLLYKW-HRGMV 39


>UniRef50_O58315 Cluster: Putative uncharacterized protein PH0602;
           n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
           protein PH0602 - Pyrococcus horikoshii
          Length = 558

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 21/87 (24%), Positives = 42/87 (48%)
 Frame = +2

Query: 206 FILIWFSHGYHYQNWTKLKWDHTGSVSFLIKKESSKSIHPDKSYEVTNIKKTYSRIENLL 385
           F+ + F +   Y++W   KW   G  +F     S++ ++P    E+++++  YS      
Sbjct: 165 FVKVGFKYA-EYESWALEKWKWEGKANFTGSLPSNEGLNPFLINELSDVRLAYST----- 218

Query: 386 LF*SRLKRQIFSMNETSQLCLYVIFTY 466
              + +K  + ++NE S   +Y IF Y
Sbjct: 219 ---NNMKGLLKAINELSSK-MYEIFKY 241


>UniRef50_Q5CH32 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium hominis
          Length = 281

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
 Frame = +2

Query: 167 LFIYLSR*YLMQIFI---LIWFSHGYHYQNWTKLKWD---HTGSVSFLIKKESSKSIHPD 328
           LF+  S     Q++I   L  F+H Y Y  W +  W    H+  + +  +  S+   +PD
Sbjct: 203 LFLRASNREATQLWIPTSLTIFAHCYWYLLWLRKHWRSLFHSEEIPYSKENISTAKSNPD 262

Query: 329 KSYEVTNIKKTYSRIE 376
           K Y   +    YS IE
Sbjct: 263 KEYNCIDYFDHYSNIE 278


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,597,040
Number of Sequences: 1657284
Number of extensions: 8459575
Number of successful extensions: 20988
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20973
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)