Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304G12f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30290| Best HMM Match : I-set (HMM E-Value=1.4e-21) 38 0.005
SB_47306| Best HMM Match : I-set (HMM E-Value=0) 38 0.005
SB_14313| Best HMM Match : I-set (HMM E-Value=1.8e-21) 38 0.007
SB_13651| Best HMM Match : I-set (HMM E-Value=4e-17) 37 0.009
SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.009
SB_10041| Best HMM Match : ig (HMM E-Value=3.5e-06) 37 0.012
SB_36553| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_17403| Best HMM Match : I-set (HMM E-Value=0) 36 0.015
SB_55336| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 36 0.027
SB_8553| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.062
SB_43700| Best HMM Match : SRCR (HMM E-Value=0) 34 0.082
SB_38293| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.082
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_47305| Best HMM Match : I-set (HMM E-Value=0) 33 0.11
SB_55607| Best HMM Match : ig (HMM E-Value=4.6e-17) 32 0.25
SB_46235| Best HMM Match : I-set (HMM E-Value=7.6) 32 0.25
SB_37708| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_24434| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_40832| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_16822| Best HMM Match : I-set (HMM E-Value=1.3e-07) 31 0.76
SB_42560| Best HMM Match : ig (HMM E-Value=2.4e-06) 31 0.76
SB_39796| Best HMM Match : VWA (HMM E-Value=0) 31 0.76
SB_12405| Best HMM Match : I-set (HMM E-Value=8.8e-21) 31 0.76
SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12) 25 0.84
SB_24929| Best HMM Match : ig (HMM E-Value=8.2e-06) 30 1.0
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 30 1.0
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 30 1.3
SB_23651| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_18843| Best HMM Match : I-set (HMM E-Value=1e-07) 30 1.3
SB_8401| Best HMM Match : ig (HMM E-Value=8.1e-22) 29 1.8
SB_56444| Best HMM Match : fn3 (HMM E-Value=1.2e-21) 29 1.8
SB_43971| Best HMM Match : I-set (HMM E-Value=1.7e-09) 29 1.8
SB_41626| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_29237| Best HMM Match : I-set (HMM E-Value=0) 29 1.8
SB_53160| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_9202| Best HMM Match : ig (HMM E-Value=5e-40) 29 2.3
SB_40708| Best HMM Match : SRCR (HMM E-Value=0) 29 2.3
SB_27122| Best HMM Match : I-set (HMM E-Value=1.9e-39) 29 3.1
SB_17577| Best HMM Match : fn3 (HMM E-Value=0) 29 3.1
SB_41623| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_26711| Best HMM Match : I-set (HMM E-Value=0) 29 3.1
SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_21223| Best HMM Match : I-set (HMM E-Value=2.8e-11) 28 4.1
SB_14169| Best HMM Match : YTH (HMM E-Value=0.00023) 28 4.1
SB_8817| Best HMM Match : I-set (HMM E-Value=0) 28 4.1
SB_52854| Best HMM Match : I-set (HMM E-Value=0.22) 28 5.4
SB_10883| Best HMM Match : ig (HMM E-Value=7.00649e-43) 28 5.4
SB_5499| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_51089| Best HMM Match : I-set (HMM E-Value=1.4e-38) 28 5.4
SB_50854| Best HMM Match : ig (HMM E-Value=6.1e-27) 28 5.4
SB_43084| Best HMM Match : ig (HMM E-Value=9.7e-23) 28 5.4
SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 27 7.1
SB_50799| Best HMM Match : I-set (HMM E-Value=0) 27 7.1
SB_8391| Best HMM Match : Dynamin_N (HMM E-Value=9.7e-18) 27 7.1
SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_8673| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-38) 27 7.1
SB_3431| Best HMM Match : EGF (HMM E-Value=1.8e-08) 27 7.1
SB_58257| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2) 27 9.4
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_40811| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_40687| Best HMM Match : PADR1 (HMM E-Value=0.23) 27 9.4
SB_30961| Best HMM Match : I-set (HMM E-Value=0) 27 9.4
SB_1675| Best HMM Match : ig (HMM E-Value=5.6e-05) 27 9.4
SB_20844| Best HMM Match : Ion_trans (HMM E-Value=0) 27 9.4
SB_8687| Best HMM Match : RCSD (HMM E-Value=0.25) 27 9.4
>SB_30290| Best HMM Match : I-set (HMM E-Value=1.4e-21)
Length = 250
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 318 TATFTLSIRDIQENDAGWYQCQVLMSISN-KIAAEVELQVRRPPIISDNSTRSIVASE 488
T + TLS+ IQ + AG YQCQ + + I +V + V+ PP I+ ++ A E
Sbjct: 123 TGSATLSLLKIQRHQAGVYQCQAINDVGRVAITQDVTINVQYPPEITPIQNTTVRAGE 180
>SB_47306| Best HMM Match : I-set (HMM E-Value=0)
Length = 1260
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 270 GLIIKDS-RFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVR 437
G +++D+ RF DE F+L I D+Q DAG Y+C + + ++ AE L ++
Sbjct: 586 GKVVEDAGRFLYVEDEEPEVFSLVIDDVQPEDAGKYKC-IAFNEKGEVEAEANLSIK 641
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +3
Query: 291 RFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQV 434
RF L DE F+L I D+Q +D+G Y+C V + + +++++ EL V
Sbjct: 60 RFMLVDDEGEGMFSLLIDDVQPSDSGMYEC-VAFNNAGEVSSKAELIV 106
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 270 GLIIKDS-RFSLRHDEATATFTLSIRDIQENDAGWYQC 380
G +++D+ RF +E F+L I D+Q DAG Y+C
Sbjct: 1215 GQVVEDAGRFLYVENEEPGIFSLVIDDVQPEDAGKYKC 1252
>SB_14313| Best HMM Match : I-set (HMM E-Value=1.8e-21)
Length = 221
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 318 TATFTLSIRDIQENDAGWYQCQVLMSIS-NKIAAEVELQVRRPPIISDNSTRSIVASE 488
T TLS+ IQ + AG YQCQ + ++ I ++ + V+ PP I+ ++ A E
Sbjct: 83 TGNATLSLLKIQRHQAGVYQCQAINNVGRGAITQDITINVQYPPEITPIQNTTVRAGE 140
>SB_13651| Best HMM Match : I-set (HMM E-Value=4e-17)
Length = 333
Score = 37.1 bits (82), Expect = 0.009
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 318 TATFTLSIRDIQENDAGWYQCQVLMSIS-NKIAAEVELQVRRPPIISDNSTRSIVASE 488
T + TLS+ IQ + AG YQCQ + + I +V + V+ PP I+ ++ A E
Sbjct: 206 TGSATLSLLKIQRHQAGLYQCQAINDVGRGAITQDVTIIVQYPPEITPIQNTTVRAGE 263
>SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1189
Score = 37.1 bits (82), Expect = 0.009
Identities = 25/85 (29%), Positives = 38/85 (44%)
Frame = +3
Query: 264 NAGLIIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRP 443
N ++ DSR ++ + L I + +DAG Y+C+ S S ++AE L+V P
Sbjct: 329 NGQIVTYDSRVTIIGES-----NLEIMQVVPSDAGTYKCEATSSGSQPVSAETRLKVNYP 383
Query: 444 PIISDNSTRSIVASEGXSVQMECYA 518
P+ R A G V C A
Sbjct: 384 PVFI-KRLRDHNAYTGSVVTFNCTA 407
>SB_10041| Best HMM Match : ig (HMM E-Value=3.5e-06)
Length = 333
Score = 36.7 bits (81), Expect = 0.012
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 318 TATFTLSIRDIQENDAGWYQCQVLMSI-SNKIAAEVELQVRRPPIISDNSTRSIVASE 488
T + TLS+ IQ + AG YQCQ + I +V + V+ PP I+ ++ A E
Sbjct: 247 TGSATLSLLKIQRHQAGVYQCQATNDVGKGAITQDVTINVQYPPEITPMHNTTVRAGE 304
>SB_36553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 36.3 bits (80), Expect = 0.015
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 318 TATFTLSIRDIQENDAGWYQCQVLMSI-SNKIAAEVELQVRRPPIISDNSTRSIVASE 488
T + TLS+ IQ + AG YQCQ + I +V + V+ PP I+ ++ A E
Sbjct: 53 TGSATLSLLKIQRHQAGVYQCQATNDVRRGAITQDVTINVQYPPKITPIQNTTVRAGE 110
>SB_17403| Best HMM Match : I-set (HMM E-Value=0)
Length = 671
Score = 36.3 bits (80), Expect = 0.015
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +3
Query: 201 FPVVWTKRDRLKTIESIPLSTNAGL-IIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQ 377
F V+W + + + S+ +G+ I++D L +A ATF I +++E+D Y+
Sbjct: 78 FQVIWARHEPHGWVNLAVKSSLSGISILRDEGHVLVDADAEATFI--IMNVRESDHARYR 135
Query: 378 CQVLMSISNKIAAEVELQVRRP-PIISDNSTRSIVASEGXSVQMECY 515
C + +S A V+L V P ++ + S + EG SV + C+
Sbjct: 136 CSIESKMSLS-PASVKLNVLVPATVVWISENESFI--EGASVTLSCW 179
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQMEC 512
L+IR +Q D G Y C I ++ ++V P+I RS EG M C
Sbjct: 377 LTIRRVQGVDQGVYVCTASNGIGLDASSTTTVEVLVSPVIDVIQPRSQTVIEGQPASMYC 436
Query: 513 YA 518
A
Sbjct: 437 NA 438
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 318 TATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPII 452
T+ TL I + G ++C + A+V L V+ PP+I
Sbjct: 457 TSGMTLQITAAHRRETGTFRCTADNGVIRTAXAKVTLDVQYPPMI 501
>SB_55336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 771
Score = 35.5 bits (78), Expect = 0.027
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASE-GXSVQM 506
TL I DAG YQC I N+ + ++ V PP ++ R+IV G S +
Sbjct: 111 TLEIESASREDAGRYQCVASNRIGNETSRYADVTVYYPPTVNLTEKRTIVKLPLGASETL 170
Query: 507 ECYA 518
C A
Sbjct: 171 SCPA 174
>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4232
Score = 35.5 bits (78), Expect = 0.027
Identities = 34/139 (24%), Positives = 55/139 (39%)
Frame = +3
Query: 96 VSAQRTPTISHITQEQIRDIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGL 275
+S + P I++ Q + V + CS + + F V+W K + + S
Sbjct: 673 LSVKLPPVITNHPANQTANKDENVTIACSANGTEPFNVIWLKNNEVYDFSS--------- 723
Query: 276 IIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIIS 455
DSR H+ TL I + ND G YQC V ++K + P I
Sbjct: 724 ---DSRVHESHN----NLTLEIFGVLPNDHGSYQCDVSNGRTDKSYPGTLIVKYAPQFIV 776
Query: 456 DNSTRSIVASEGXSVQMEC 512
+ ++ +EG V+ EC
Sbjct: 777 EPKGKT--TTEGQVVKFEC 793
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +3
Query: 255 LSTNAGLIIKDSRFSLRHDEA--TATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVEL 428
L N L R ++ H + T +L+I ++ D Y C+ + + K + + L
Sbjct: 1652 LKDNTPLDTSPDRITVTHPGSYGNTTSSLTITNLVRTDEARYSCKAINAAGEKTSEQGLL 1711
Query: 429 QVRRPPIISDNSTRSIVASEGXSVQMEC 512
V PP I +++ +EG V + C
Sbjct: 1712 TVNYPPKIL-TPPKNVTITEGNDVTLSC 1738
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQME 509
TL++ +++E D+G Y C + + L V+ PP+I+ N + A++ +V +
Sbjct: 641 TLNLVNVKEGDSGNYTCVAEAGENTTTSDAAFLSVKLPPVIT-NHPANQTANKDENVTIA 699
Query: 510 CYA 518
C A
Sbjct: 700 CSA 702
Score = 30.3 bits (65), Expect = 1.0
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 285 DSRFSLRHDEATATF--TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISD 458
DS F +++ + L + +D G Y C S+SN ++ +L V P IS
Sbjct: 1083 DSPFDAKYNTRASLSEGNLIFTKVSRDDHGQYYCLANNSVSNVTSSIAKLTVFFKPDIST 1142
Query: 459 NSTRSIVASEGXSVQMECYA 518
+ + V +EG +V + C A
Sbjct: 1143 HPSPQTV-TEGENVTLSCAA 1161
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/139 (20%), Positives = 46/139 (33%)
Frame = +3
Query: 96 VSAQRTPTISHITQEQIRDIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGL 275
V+ Q P I I+ G V+L C + + V W L S +S
Sbjct: 1413 VTVQYPPKFFKIPDNVIKTEGSSVNLTCQLECKPKCSVTWLIGGSLLDTSSDRISVTQP- 1471
Query: 276 IIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIIS 455
++ T L I ++ D Y C+ + K + V L V PP
Sbjct: 1472 ----------ENDGNETSFLMISNLNRTDEASYTCRAKNAAGEKTSGSVNLAVNYPPKFL 1521
Query: 456 DNSTRSIVASEGXSVQMEC 512
+ +E ++ + C
Sbjct: 1522 QSLKDEETLNETDNLTLTC 1540
Score = 29.1 bits (62), Expect = 2.3
Identities = 27/131 (20%), Positives = 58/131 (44%)
Frame = +3
Query: 120 ISHITQEQIRDIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFS 299
+ + ++ R+ + L C + + VVW K ++ L ++ LII S
Sbjct: 1323 LESLKPKETRNETDNLTLTCKLEGKPQATVVWLK-------DNTELKPDSRLIITQPS-S 1374
Query: 300 LRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIV 479
+ E+T L+I ++ +D Y+C+ ++ ++ + V+ PP +++
Sbjct: 1375 VDSGEST----LTIINLDRSDEASYKCRANNTVGIVTSSNTTVTVQYPPKFF-KIPDNVI 1429
Query: 480 ASEGXSVQMEC 512
+EG SV + C
Sbjct: 1430 KTEGSSVNLTC 1440
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 348 IQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQMECYA 518
I +D G Y C S+SN ++ +L V P IS + + +EG +V + C A
Sbjct: 1014 ISRDDHGQYYCLANNSVSNVTSSIAQLNVFFKPDISTYPSPQTI-TEGENVTLLCVA 1069
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 348 IQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQMEC 512
+ +D G Y C S+SN +++V+L V P I+ + ++ EG V + C
Sbjct: 1198 VSRDDHGQYYCLANNSVSNVTSSKVQLTVFFAPSITTH-PQNQTKVEGEIVTLSC 1251
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQME 509
TL I ++ D G Y C ++S+ + L V PP ++ +E ++ +
Sbjct: 1282 TLKIENLTREDEGSYICHAFNNVSSTSSDAAVLTVNYPPKFLESLKPKETRNETDNLTLT 1341
Query: 510 C 512
C
Sbjct: 1342 C 1342
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +3
Query: 255 LSTNAGLIIKDSRFSLRHDEA--TATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVEL 428
L N L R ++ H + T +L+I ++ D Y C+ + + K + + L
Sbjct: 2094 LKDNTPLDTSPDRITVTHPGSYGNTTSSLTITNLVRTDEARYSCKAINAAGEKSSEQGLL 2153
Query: 429 QVRRPPIISDNSTRSIVASEGXSVQMEC 512
V PP ++ +E ++ + C
Sbjct: 2154 TVNYPPKFLESLKPEETRNETDNLTLTC 2181
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/61 (21%), Positives = 28/61 (45%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQME 509
TL I ++ +D +Y+C+ +++ + + V+ PP S + +E V +
Sbjct: 2220 TLKIINVNRHDEAYYKCRANNTVNTTASTNTSVVVQYPPKFF-QSPKDKTVTEKSDVTLT 2278
Query: 510 C 512
C
Sbjct: 2279 C 2279
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 35.5 bits (78), Expect = 0.027
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +3
Query: 276 IIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPP 446
+I+ + + + D TFTL + D Q +D+G Y+C V ++ + K ++ L+V P
Sbjct: 1776 LIEGTIYKMLEDSGNHTFTLIVNDSQRHDSGVYKC-VAVNEAGKAISQATLEVTGRP 1831
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 276 IIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQV 434
+ ++ RF + DE F+L I + + D+G Y CQ + + K AE E+Q+
Sbjct: 454 VAEEGRFLIVDDEEGDLFSLIIGNAKPLDSGVYICQA-TNDTGKATAEAEIQI 505
Score = 31.5 bits (68), Expect = 0.44
Identities = 31/110 (28%), Positives = 48/110 (43%)
Frame = +3
Query: 120 ISHITQEQIRDIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFS 299
+S + ++I + G LEC V + + W K D P++T D+R
Sbjct: 926 VSELQPQEISE-GEDAKLECKVSGEPQPTIEWFKDDE-------PVTT-------DNRVR 970
Query: 300 LRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPI 449
+D T+T T IRD +D G Y+C V + +A EL V P+
Sbjct: 971 ADYDGKTSTLT--IRDATLDDEGDYKC-VATNELGSTSATTELLVNEKPV 1017
Score = 31.1 bits (67), Expect = 0.58
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = +3
Query: 324 TFTLSIRDIQENDAGWYQCQVLMSI-SNKIAAEVELQVRR-----PPIISDNSTRSIVAS 485
T+TL+I + DAG Y C+ + ++ +V+++ + P ++S+ + I S
Sbjct: 878 TYTLNIHTTEPEDAGSYTCEAQNKMGTSSTTIDVQIEASKPKGEAPSLVSELQPQEI--S 935
Query: 486 EGXSVQMEC 512
EG ++EC
Sbjct: 936 EGEDAKLEC 944
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 276 IIKDS-RFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQV 434
I++D RF + D F L I D + D+G Y+C V I + + +LQV
Sbjct: 1516 IVEDKGRFMIIDDAKEGVFQLVIEDAKPEDSGVYKCVVFNDI-GETQTKAKLQV 1568
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/94 (25%), Positives = 44/94 (46%)
Frame = +3
Query: 168 DLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFTLSIRD 347
DL SV + F + T R K ++ + +I + SLR + +++L I
Sbjct: 2422 DLGQSVTAQEGFELNKTFIIRGKPRPTVTWMKDGNVISSSNGVSLR--QRGESYSLVIIK 2479
Query: 348 IQENDAGWYQCQVLMSISNKIAAEVELQVRRPPI 449
+ + D+G Y CQ + S+ K + +L+V P +
Sbjct: 2480 VTKEDSGNYTCQAVSSL-GKASQSFDLKVEAPKV 2512
>SB_8553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 982
Score = 34.3 bits (75), Expect = 0.062
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 6/150 (4%)
Frame = +3
Query: 87 TCNVSAQRTPTISHITQEQI---RDIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPL 257
T V + T T+S + +E+ +G + L+CS VVW K + P
Sbjct: 138 TLTVDSPPTFTVSKLKREKTLIAMPVGNSLKLDCSADGKPRPTVVWLKNGK-------PF 190
Query: 258 STNAGLIIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQV---LMSISNKIAAEVEL 428
G+ SLR + + LS+RD +D G Y C V L I++ +V
Sbjct: 191 LKRDGV-----ELSLRPYQ----YVLSMRDAVPSDDGRYTCNVSNALGWINHTYTVDVRE 241
Query: 429 QVRRPPIISDNSTRSIVASEGXSVQMECYA 518
+VR P++ + ++++ G + +EC A
Sbjct: 242 RVRAKPVLQPIANVTVLS--GENATLECKA 269
>SB_43700| Best HMM Match : SRCR (HMM E-Value=0)
Length = 967
Score = 33.9 bits (74), Expect = 0.082
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQCQVL--MSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQM 506
L ++ D G Y C L M I IAA ++ V PP +S +SIVASEG +
Sbjct: 555 LVFSSLRRTDQGMYSCVALNSMGIGRSIAA-AKMTVNYPPEVS---LQSIVASEGGLATL 610
Query: 507 EC 512
C
Sbjct: 611 RC 612
Score = 31.1 bits (67), Expect = 0.58
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +3
Query: 348 IQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQMEC 512
+ D G Y C+ S+ N I+ + + PP+ S + A EG + ++C
Sbjct: 655 VYRTDQGSYTCEASNSVGNGISLASRMTIHYPPV---TSVSPLEAKEGDNATLKC 706
>SB_38293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1732
Score = 33.9 bits (74), Expect = 0.082
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPP--IISDNSTRSIVASEGXSVQ 503
TL+I D++ +D G Y C +I ++ + V L V+ P IS N+T + +G V
Sbjct: 193 TLTISDVKISDGGCYVCTAYNNIGSEASGTVCLTVQYAPNATISVNTT---LVCQGDHVA 249
Query: 504 MECYAG 521
+ C AG
Sbjct: 250 LTCTAG 255
Score = 31.5 bits (68), Expect = 0.44
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +3
Query: 294 FSLRHDEATATF---TLSIRDIQENDAGWYQCQVLMSISNKI--AAEVELQVRRPPIISD 458
F R+ +TATF TL+I+D+Q DAG Y ++ A++ L V PP ++
Sbjct: 92 FKSRYSLSTATFNPITLTIKDVQPQDAGVYAMRLANDDGKTTFEASKFTLDVLVPPGVTP 151
Query: 459 NSTRSIVASEGXSVQMECYA 518
+ ++ ++ ++ C A
Sbjct: 152 GA--NVTVNKTDKAELSCSA 169
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +3
Query: 87 TCNVSAQRTPTISHITQEQIRDIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESI 251
T ++ + P+I+ IT G V+L+C+ + V W+K + SI
Sbjct: 1015 TVQIAVKAAPSITFITANMTVTEGSLVNLQCNTSGSPPLNVSWSKVGAAGALSSI 1069
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 33.5 bits (73), Expect = 0.11
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +3
Query: 276 IIKDS-RFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPI- 449
+I+D RF++ +E+ F+L I+D++E DAG Y+C V + + + + +L V I
Sbjct: 434 VIEDGERFTIA-EESDEVFSLIIQDLEETDAGRYKC-VATNEAGEAESMAQLTVNEELIG 491
Query: 450 -ISDNSTRSIVASEGXSVQM 506
+ S EG SV++
Sbjct: 492 PRFEKMKESFTVVEGESVEL 511
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +3
Query: 276 IIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRR----P 443
I+ + RF + + T ++L++ ++ + DAG Y+C + ++ + K +L+V P
Sbjct: 2392 ILDEDRFEIESVKETGYYSLTVGEVVQEDAGMYKC-IAVNKAGKSTCRADLEVNERQFAP 2450
Query: 444 PIISDNSTRSIVASEGXSVQME 509
+ IV EG ++
Sbjct: 2451 EFETGEERGPIVVPEGGETTLK 2472
Score = 31.9 bits (69), Expect = 0.33
Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Frame = +3
Query: 93 NVSAQRTPTISHI-TQEQIRDIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNA 269
N T T+ I TQ IR I GQ ++ V + + + ++ +
Sbjct: 2040 NQHGSTTTTVQVIVTQRSIRPIFGQKMKNVEGRIGED--VRFEIQVEGTPVPAVTFHRES 2097
Query: 270 GLIIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLM---SISNKIAAEVELQVRR 440
I R+S+ +E F L+IR+ + DAG YQC + +++K VE ++
Sbjct: 2098 EQIYDGGRYSIVEEE-NGLFVLTIRNTRPEDAGEYQCIAVNGAGEVTSKGYLHVEEELTI 2156
Query: 441 PPIISD 458
P I D
Sbjct: 2157 PQFIGD 2162
Score = 30.3 bits (65), Expect = 1.0
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +3
Query: 276 IIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRR---PP 446
I D F + E ++L I + + DAG Y+C L + S K + EL V PP
Sbjct: 2982 IFTDGHFEVIEGEEECLYSLVISNTKVADAGGYKCTAL-NESGKSSTRAELLVNERLIPP 3040
Query: 447 IISDNSTRSIVASEGXSVQME 509
S EG ++ ++
Sbjct: 3041 GFEGPDHGSYELQEGDTITLD 3061
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +3
Query: 288 SRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRR---PPIIS 455
+RFS + E T+TL+I D+ D G Y+C V + + K+ L V+ PP IS
Sbjct: 3280 ARFSSKAGEKH-TYTLTISDVAMEDFGTYKC-VASNDAGKVQCSGRLDVKERMVPPEIS 3336
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 327 FTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIIS---DNSTRSI--VASEG 491
FT+++ D+ +D+G YQC V + + + L V++ +I D T I EG
Sbjct: 1624 FTMTVSDLGLDDSGMYQC-VARNKAGSSSRTFNLDVQKKKVIGNAPDIITHLISKEVKEG 1682
Query: 492 XSVQMEC 512
+V +EC
Sbjct: 1683 GTVTLEC 1689
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +3
Query: 276 IIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRR---PP 446
I RF++ +E + + L I D DAG Y+ V + K+ ++ L+V P
Sbjct: 1510 IYDGGRFTITEEENSGVYVLVIEDTNIEDAGTYKV-VAYNNLGKVTSQALLRVNEVLTVP 1568
Query: 447 IISDNSTRSIVASEGXSVQM 506
D + I +EG +++
Sbjct: 1569 EFMDKAEGPIEKTEGDDLEL 1588
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVAS 485
+L+I+D + DAG Y+C+V ++ K L V P S S+VAS
Sbjct: 4157 SLTIKDCKLADAGIYKCEV-SNVGGKAGTSAHLTVEELP----KSRPSVVAS 4203
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 273 LIIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQV 434
+I +D R + + +L I DI DAG Y+C V + I+ E EL V
Sbjct: 4556 MIEEDDRIRIEEGDV-GECSLVIMDIDREDAGVYKC-VAENDDGSISCEAELIV 4607
>SB_47305| Best HMM Match : I-set (HMM E-Value=0)
Length = 5832
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +3
Query: 288 SRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPI---ISD 458
SRF + D+ T +L I D++ +D+G YQC + + + + +L+V+ P +D
Sbjct: 325 SRFKITTDDTEQTSSLVISDLRLDDSGAYQC-IASNEAGECNLRADLKVKNKPFAPEFAD 383
Query: 459 NSTRSIVASEGXSVQM 506
I E +V +
Sbjct: 384 GDLEPIEVKEDQAVNV 399
Score = 31.9 bits (69), Expect = 0.33
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +3
Query: 246 SIPLSTNAGLIIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKI-AAEV 422
S+ N I+ D R D T + L ++DI+ DAG Y+C I AE+
Sbjct: 1933 SVTWYRNKNEIVPDGRSRTTFDGET--YKLILQDIKIKDAGQYECIASNPIGKAFCTAEM 1990
Query: 423 ELQVRR-PPIISDNSTRSIVASEGXSVQME 509
+ R P+I + S ++ SEG + +E
Sbjct: 1991 TVNKREVKPVIKEVS-KTFEVSEGGTASIE 2019
Score = 31.5 bits (68), Expect = 0.44
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +3
Query: 273 LIIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSI---SNKIAAEVELQVRRP 443
L++ D + L+ + L IR +DAG Y C+ SI S +I +VE P
Sbjct: 2135 LLMSDRKIDLK--TIGGLYYLEIRKATLDDAGTYICKATNSIGSTSRRIIVDVEALKEAP 2192
Query: 444 PIISDNSTRSIVASEGXSVQMEC 512
+S R + +EG +V C
Sbjct: 2193 VFVS--KLRPLFVTEGDNVSWMC 2213
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRR---PPIISDNSTRSIVASEGXSV 500
+L I+D+ ++DAG Y+C V + + + + +L V+ P I + I EG SV
Sbjct: 48 SLIIKDLTKDDAGAYKC-VATNDAGQTSLRGDLSVKEKQIAPQIKEKEQEPIEVFEGESV 106
Query: 501 QME 509
++
Sbjct: 107 NLD 109
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 279 IKDS-RFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVR 437
I+D R+ D+ ++L+I+D+ D G Y+C + + + K+ EL+V+
Sbjct: 1451 IRDGGRYKFSRDDQK--YSLTIKDLNLQDIGTYKC-IASNEAGKVTQRAELEVK 1501
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 279 IKDS-RFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQV 434
IKD RF++ E ++L I + + D+G Y+C V + + K A + L V
Sbjct: 573 IKDGGRFTISESEENDMYSLVIDEARTEDSGPYKC-VASNDAGKTTALLNLDV 624
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQV---RRPPIISDNSTRSIVASEGXSV 500
TLSI + D+G Y+C L + S ++ EL V + P +SDN + + A+ G
Sbjct: 5305 TLSIHNANHADSGMYKC-TLKNNSGWASSSAELVVGGKTQRPRLSDN-MKELFATVGGEA 5362
Query: 501 QME 509
+ E
Sbjct: 5363 RFE 5365
>SB_55607| Best HMM Match : ig (HMM E-Value=4.6e-17)
Length = 274
Score = 32.3 bits (70), Expect = 0.25
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Frame = +3
Query: 114 PTISHITQEQIRDIGGQVDLECSVHYA-QEFPVV-WTKRDRLKTIES-IPLSTNAGLIIK 284
P +S +Q + L C+V A Q++ V WT + T ++T ++
Sbjct: 106 PHVSPFSQVVVSTTDSTTTLICAVENAPQKYTTVFWTLNSKQLTDGGRYKMATTFSTEVE 165
Query: 285 DSRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVEL 428
R L AT TL I+ + D+G YQC V+ I + AE++L
Sbjct: 166 YKRLLLER----ATMTLIIKHVTTQDSGEYQCGVVTHIGSG-HAEIQL 208
>SB_46235| Best HMM Match : I-set (HMM E-Value=7.6)
Length = 66
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQV 434
TL I+++ E DAG Y C++ +++ N A + L V
Sbjct: 30 TLVIKNVTETDAGNYSCEISVNVGNPKIAYISLTV 64
>SB_37708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASE-GXSVQM 506
T+ + + DAG Y+C SI ++ + ++ V+ PPI++ +IV G S +
Sbjct: 663 TVKVERARREDAGSYRCVANNSIGSQTSRSADVTVQFPPIVNLTRKLTIVKLPLGASDTL 722
Query: 507 ECYA 518
C A
Sbjct: 723 SCPA 726
>SB_24434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1194
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQMEC 512
L I E+ AG Y C S+K A ++ ++ PP+++ + G + + C
Sbjct: 238 LVIDRADESSAGAYTCACRARTSSKAVAHTKVVIKGPPVLTATPKPEVKLMRGDDLALVC 297
Query: 513 YA 518
A
Sbjct: 298 QA 299
>SB_40832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1496
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 312 EATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPII 452
EA T +L IRDIQ D G Y C + + + + + V +PP+I
Sbjct: 559 EANCT-SLIIRDIQPGDEGSYTCTAVNPMGTDV-NNMSITVTKPPVI 603
Score = 28.3 bits (60), Expect = 4.1
Identities = 32/137 (23%), Positives = 52/137 (37%), Gaps = 1/137 (0%)
Frame = +3
Query: 111 TPTISHITQEQIRDIGGQVDLECSVHYAQEFPVVWTKRDR-LKTIESIPLSTNAGLIIKD 287
+PTI+ I G ++ ++C + ++W K R L S N L+I+
Sbjct: 68 SPTIARIADNATVLTGSRLTIDCVATGVPKPSIIWRKDGRELIGAGSYMAPGNGSLLIQQ 127
Query: 288 SRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNST 467
S H T T T + + + VL IS + P +S +
Sbjct: 128 VAAS-HHGVFTCTATNPVGEDSVSSNIRVVDPVLPRISRPTIGSTKSTDNMNP-VSISVG 185
Query: 468 RSIVASEGXSVQMECYA 518
+ A EG +V +EC A
Sbjct: 186 SDVTAIEGVTVSIECNA 202
>SB_16822| Best HMM Match : I-set (HMM E-Value=1.3e-07)
Length = 259
Score = 30.7 bits (66), Expect = 0.76
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 318 TATFTLSIRDIQENDAGWYQCQVLMSISNK-IAAEVELQVR 437
T + TLS+ IQ + AG YQCQ + + + I +V + V+
Sbjct: 172 TGSATLSLLKIQRHQAGVYQCQAINDVRREAITQDVTINVQ 212
>SB_42560| Best HMM Match : ig (HMM E-Value=2.4e-06)
Length = 360
Score = 30.7 bits (66), Expect = 0.76
Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 4/133 (3%)
Frame = +3
Query: 87 TCNVSAQRTPTISHITQEQIRDIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTN 266
+C + + TI + + IG ++ L+C+ ++ V W K + L T
Sbjct: 36 SCKIKLKYGETIELKHTDYVMKIGSRIKLKCAPLPEKKTTVEWFKNGEV-------LRTR 88
Query: 267 AGLIIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRR-- 440
G II + ++ L IRDI+ +D G Y C K+ +L V R
Sbjct: 89 EGRIIARKKKKRKNQR------LIIRDIKPSDEGCYSCYAPRDGGLKLIKSWKLFVEREK 142
Query: 441 --PPIISDNSTRS 473
PP + TR+
Sbjct: 143 VKPPPVLRRVTRT 155
>SB_39796| Best HMM Match : VWA (HMM E-Value=0)
Length = 2119
Score = 30.7 bits (66), Expect = 0.76
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQME 509
TL IRD+ D G Y C +++ I ++VE+ V S +++ EG +V+++
Sbjct: 412 TLVIRDLTTEDNGVYGCSLVLMSGEPIVSKVEIFVTVAQ-FSLTPPKTVTVHEGETVKLK 470
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQM 506
TL I D+ D G Y C +L+ +I + V+L V +D++ + +V +V++
Sbjct: 832 TLVIADLTVQDTGTYGCSLLLVTGKRIDSTVKLVVTG----NDSTVKLVVTGNDSTVKL 886
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPP 446
TL I + + D+ Y C + +S I +V+L V+ PP
Sbjct: 534 TLVISNAEITDSATYGCNLKLSSGKIITEKVQLIVQAPP 572
>SB_12405| Best HMM Match : I-set (HMM E-Value=8.8e-21)
Length = 198
Score = 30.7 bits (66), Expect = 0.76
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +3
Query: 276 IIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLM---SISNKIAAEVELQVRRPP 446
I R+S+ +E F L+IR+ + DAG YQC + +++K VE ++ P
Sbjct: 28 IYDGGRYSIVEEE-NGLFVLTIRNTRPEDAGEYQCIAVNGAGEVTSKGYLHVEEELTIPQ 86
Query: 447 IISD 458
I D
Sbjct: 87 FIGD 90
>SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12)
Length = 182
Score = 25.0 bits (52), Expect(2) = 0.84
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +3
Query: 150 DIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFS 299
D V L CSV PV W+K GL+I+D+R S
Sbjct: 107 DSSATVVLNCSVSGNPSAPVTWSKIGGSLPRNRSRDDGRGGLVIRDARSS 156
Score = 24.2 bits (50), Expect(2) = 0.84
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQC 380
L IRD + +DAG Y+C
Sbjct: 148 LVIRDARSSDAGLYEC 163
>SB_24929| Best HMM Match : ig (HMM E-Value=8.2e-06)
Length = 186
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 318 TATFTLSIRDIQENDAGWYQCQVLMSISNK-IAAEVELQVR 437
T + TLS+ IQ + AG YQCQ + + + I +V + V+
Sbjct: 145 TGSATLSLLKIQRHQAGVYQCQAINDVRREAIIQDVTINVQ 185
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 351 QENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQMECYA 518
+E+D G YQC ++ N A V L+V I+ ++ R++ A+E V + C A
Sbjct: 1559 KEDDQGVYQCVPENAVGNGTTANVTLRVFGTLSIT-HAPRNVTAAENSDVTLFCNA 1613
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 29.9 bits (64), Expect = 1.3
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +3
Query: 144 IRDIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRF----SLRHD 311
IR V+ E S Q V+ K + T E +P + +D F S D
Sbjct: 4689 IRSFVVNVNTEDSTQRDQRQMVI-RKDEGSITFEDVPGNIIRPKFTEDGSFVPFQSTNED 4747
Query: 312 EATATFTLSIRDIQENDAGWYQCQV 386
T TL+IR+ ND G Y+C +
Sbjct: 4748 RQDDTHTLTIREPSPNDTGSYKCTI 4772
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 297 SLRHDEATATFTLSIRDIQENDAGWYQC 380
++R D +TL+IR+ ND+G Y+C
Sbjct: 5000 NIRLDHQDDIYTLTIREATPNDSGSYKC 5027
>SB_23651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 253 PCRPT-PGSSSRTLGSRCATTRQRPHLRSPSGIFKRTTPAGTS 378
P PT P + SRT GSR A ++ S G RTT A T+
Sbjct: 646 PASPTTPTTPSRTFGSRFADREEKKEPSSQFGFPTRTTAATTT 688
>SB_18843| Best HMM Match : I-set (HMM E-Value=1e-07)
Length = 339
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 318 TATFTLSIRDIQENDAGWYQCQVLMSIS-NKIAAEVELQVR 437
T TLS+ IQ + AG YQCQ + + I +V + V+
Sbjct: 298 TGNATLSLLKIQRHQAGVYQCQAINDVGRGAITQDVTINVQ 338
>SB_8401| Best HMM Match : ig (HMM E-Value=8.1e-22)
Length = 965
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +3
Query: 294 FSLRHDEATATF---TLSIRDIQENDAGWY 374
F R+ +TATF TL+I+D+Q DAG Y
Sbjct: 659 FKSRYSLSTATFNPITLTIKDVQPQDAGEY 688
>SB_56444| Best HMM Match : fn3 (HMM E-Value=1.2e-21)
Length = 651
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +3
Query: 282 KDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMS-----ISNKIAAEVEL 428
K SR+ L + +AT +LS IQ N +G Y+C+ + I+ KI V+L
Sbjct: 263 KTSRYQLANGIGSATLSLS--KIQRNQSGVYECRAINDVRRPPITTKITINVQL 314
>SB_43971| Best HMM Match : I-set (HMM E-Value=1.7e-09)
Length = 240
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 318 TATFTLSIRDIQENDAGWYQCQVLMSIS-NKIAAEVELQVR 437
T TLS+ IQ + AG YQCQ + + I ++ + V+
Sbjct: 199 TGNATLSLLKIQRHQAGVYQCQAINDVGRGAITQDITINVQ 239
>SB_41626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 753
Score = 29.5 bits (63), Expect = 1.8
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Frame = +3
Query: 150 DIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATF 329
D G + LEC + + W ++D+ ++P S L ++D D
Sbjct: 15 DEGSTLTLECKANIDDFLDIGWERKDQ----RTLP-SNRTVLDVEDD------DGYFIIK 63
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRR--PPIISDNSTRSIVASEGXSVQ 503
LSI D+ +DAG Y CQ + ++ ++VE++V P +S + S+++S+ V+
Sbjct: 64 RLSIVDMLPSDAGVYTCQG-WTYNSSAPSDVEVKVNEFVSPQVS-LANLSVISSQ-KQVE 120
Query: 504 MEC 512
++C
Sbjct: 121 LKC 123
>SB_29237| Best HMM Match : I-set (HMM E-Value=0)
Length = 869
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIA 413
TL I+D+Q +DAG Y C + SN A
Sbjct: 550 TLIIKDLQMSDAGMYSCTGMNGFSNYTA 577
>SB_53160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 318 TATFTLSIRDIQENDAGWYQCQVLMSI 398
T + TLS+ IQ + AG YQCQ + +
Sbjct: 216 TGSATLSLLKIQRHQAGVYQCQAINDV 242
>SB_9202| Best HMM Match : ig (HMM E-Value=5e-40)
Length = 1604
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Frame = +3
Query: 258 STNAGLIIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVR 437
+T I D+ D + L + + ++DAGWY C S + + L V
Sbjct: 373 TTAVSPIANDNSKYFISDGSNGEKRLRVNTLLKDDAGWYTCAARNSRGLGLGSSTYLTVL 432
Query: 438 RPPIISD-NSTRSIVASEGXSVQMEC 512
P + D S+ E V + C
Sbjct: 433 YAPEVMDITFIPSVTVDEYDDVTLRC 458
>SB_40708| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1976
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +3
Query: 303 RHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVA 482
R++ T FTL+I + D+G Y+C + +A V + V P I+ ++++V
Sbjct: 1781 RYNVFTNNFTLAIYNAVFEDSGQYEC-TAQNWLGTASANVSVSVGMPSSIATAPSKTVV- 1838
Query: 483 SEGXSVQMECYA 518
+ V ++C A
Sbjct: 1839 NPSQRVTLKCNA 1850
>SB_27122| Best HMM Match : I-set (HMM E-Value=1.9e-39)
Length = 378
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 318 TATFTLSIRDIQENDAGWYQCQ 383
T + TLS+ IQ++ AG YQCQ
Sbjct: 57 TGSATLSLLKIQQHQAGVYQCQ 78
>SB_17577| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1690
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 415 LKWSSRSGGPPSYRTIPPGQSS 480
L W R+G PSYRT PP S+
Sbjct: 27 LSWIRRNGPTPSYRTGPPYDST 48
>SB_41623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1604
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +3
Query: 309 DEATATFTLSIRDIQENDAGWYQCQVLMSIS--NKIAAE-VELQVRRPPIISDNSTRSIV 479
D++ TL + ++ +++ G Y+C+V S S N AE L V+ I+S S ++
Sbjct: 172 DDSLHKNTLRLTNVGKDEGGMYECRVKNSFSYVNSYNAEPTRLIVKEFKILS-KSQDYLM 230
Query: 480 ASEGXSVQMEC 512
A G S+++ C
Sbjct: 231 AIVGDSLKVNC 241
>SB_26711| Best HMM Match : I-set (HMM E-Value=0)
Length = 327
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +3
Query: 273 LIIKDSRFSLRHDEAT-ATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPI 449
+I RF + D+A F LSI D++ D G Y+C + + + L ++ I
Sbjct: 144 MIDDTGRFMIIDDDADKGLFQLSIDDVRPEDLGVYKCVAFNEVGES-SCKANLLLKEEEI 202
Query: 450 ISDNSTRSIVASEGXSVQ 503
++ + A+ S Q
Sbjct: 203 VAPQVLDEVEAAPESSKQ 220
>SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2532
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -2
Query: 187 CTEHSRSTWPPISLICSCVM-CEIVGVRW 104
C H W P SL+C C+ CE + RW
Sbjct: 740 CDYHEH--WLPFSLLCDCLAECEDIECRW 766
>SB_21223| Best HMM Match : I-set (HMM E-Value=2.8e-11)
Length = 90
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 306 HDEATATFTLSIRDIQENDAGWYQCQ-VLMSISNKIAA 416
H A +L I ++ DAG YQC+ + S+SN I A
Sbjct: 47 HIRILANNSLLINGVKREDAGSYQCRATINSLSNAIQA 84
>SB_14169| Best HMM Match : YTH (HMM E-Value=0.00023)
Length = 906
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 344 GYSRERRRLVPVPSADVHKQQDRR*SGAPGQEAPHH 451
G++ +++ P PS+D+ Q+ S P +E+P H
Sbjct: 702 GWTGSIKKIPPRPSSDLTSDQEESGSDPPSRESPAH 737
>SB_8817| Best HMM Match : I-set (HMM E-Value=0)
Length = 2526
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +3
Query: 309 DEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASE 488
D+ ++L I D+ DAG Y+C V ++ + K + LQV IS+ + E
Sbjct: 1021 DQDKELYSLVIEDVIPEDAGEYEC-VAVNEAGKATSTATLQVLTK--ISELDKTPVHTVE 1077
Query: 489 GXSVQME 509
G + M+
Sbjct: 1078 GSDITMK 1084
>SB_52854| Best HMM Match : I-set (HMM E-Value=0.22)
Length = 144
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +3
Query: 294 FSLRHDEATATF---TLSIRDIQENDAGWY 374
F R+ +TATF TL+I+D++ DAG Y
Sbjct: 78 FKSRYSLSTATFNPITLTIKDVKPQDAGEY 107
>SB_10883| Best HMM Match : ig (HMM E-Value=7.00649e-43)
Length = 1280
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPI 449
TL+ RD++ +D G Y C +I + + V L V+ P+
Sbjct: 327 TLTFRDVKISDGGCYVCTATNNIGSGASGIVCLTVQYKPV 366
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 294 FSLRHDEATATF---TLSIRDIQENDAGWY 374
F R+ +TATF TL+I+D+Q D G Y
Sbjct: 925 FKSRYSISTATFNPITLTIKDVQPQDVGEY 954
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISD-NSTRS-IVASEGXSVQ 503
TL+ +++ +D G Y C +I + + V L VR P+ ++ S IV G ++
Sbjct: 1025 TLTFSNVKISDGGCYVCTATNNIGSGASGTVCLTVRYKPVHTNITGVESYIVRQCGAAIS 1084
Query: 504 MECYA 518
+ C A
Sbjct: 1085 LTCSA 1089
>SB_5499| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPP 446
L IRD + DAG Y+C +++ + +AE + VR P
Sbjct: 85 LVIRDARPQDAGLYRC-TGTNLAGRASAETSVTVRSNP 121
>SB_51089| Best HMM Match : I-set (HMM E-Value=1.4e-38)
Length = 1334
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +3
Query: 321 ATFTLSIRDIQEND--AGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGX 494
A +L + ++ +D G Y C+ +S + ++ + P I TRS G
Sbjct: 1121 ANGSLKVEKVENDDNFEGTYTCRASNRVSTA-RSSTQVTIHEGPQILTPLTRSTAVLRGK 1179
Query: 495 SVQMECYA 518
S + CYA
Sbjct: 1180 SAVLTCYA 1187
>SB_50854| Best HMM Match : ig (HMM E-Value=6.1e-27)
Length = 770
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 327 FTLSIRDIQENDAGWYQCQV 386
F L I ++ E D GWY C++
Sbjct: 516 FNLEIVNVTEEDKGWYACEL 535
>SB_43084| Best HMM Match : ig (HMM E-Value=9.7e-23)
Length = 960
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 294 FSLRHDEATATF---TLSIRDIQENDAGWY 374
F R+ +TATF TL+I+D+Q D G Y
Sbjct: 67 FKSRYSISTATFNPITLTIKDVQPQDVGEY 96
>SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 660
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 318 TATFTLSIRDIQENDAGWYQCQVLMSI-SNKIAAEVELQVRRPPIISDNSTRSIVASEGX 494
T+ TLSI + +D+G Y C + S+K + + VR P + R I G
Sbjct: 320 TSDQTLSILKTRRSDSGLYLCTATSPLGSSKSTTHLVVAVR--PKFTVRPPRKIKQYAGA 377
Query: 495 SVQMECYA 518
+V++ C A
Sbjct: 378 TVRVNCSA 385
>SB_50799| Best HMM Match : I-set (HMM E-Value=0)
Length = 1195
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 96 VSAQRTPTISHITQEQIRDIGGQVDLECSVHYAQEFPVVWTKRDR 230
V+ TP + +IT +G + L C V + V WTK R
Sbjct: 916 VTVHVTPNVQNITAPVSPRLGDNITLVCVVRGFPDLSVNWTKDGR 960
>SB_8391| Best HMM Match : Dynamin_N (HMM E-Value=9.7e-18)
Length = 957
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +3
Query: 345 DIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASE 488
D + +DA W +C V + ++N + L++ P +S+N + E
Sbjct: 171 DKKRSDAEWVRCVVKVGLNNSLLRGGHLELVDAPGMSENEVLDQIVQE 218
>SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQCQVL---MSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQ 503
L IRD +DAG Y C + S + A V+++ P+I+ ++ + +E S +
Sbjct: 552 LKIRDATTSDAGNYTCTLEGPGPSALDNATAVVDVKDLSHPLIAMSTPTKLTVNETSSFE 611
Query: 504 MEC 512
+ C
Sbjct: 612 LTC 614
>SB_8673| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-38)
Length = 719
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 218 GPDNRKLLSIMHGTFQVYLASDIPDLLLC 132
GP LL+ GTF VYLAS + +L C
Sbjct: 617 GPSVNVLLAWNIGTFFVYLASSLNPVLYC 645
>SB_3431| Best HMM Match : EGF (HMM E-Value=1.8e-08)
Length = 480
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 244 NRYPCRPTPGSSSRTLGSRCATTRQRPHLRSPSGIFKRTTPAGTSA 381
N Y C PG + R C+ +P + S +++ TP G+ A
Sbjct: 213 NNYTCTCQPGYTGRNCEIACSVRIFKPACFTFSDVYRIRTPNGSGA 258
>SB_58257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 27.1 bits (57), Expect = 9.4
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 238 RSNRYPC-RPTPGSSSRTLGSRCATTRQRPHLRSPSGIFKRTTPAGTSAKC*CP*AT 405
R+NR+ P + L SR T R RP +R+P + + TPA SA P AT
Sbjct: 94 RNNRFTAVNSKPLAWRLNLSSR--TPRSRPPIRTPIPLKETPTPALESAHAAMPDAT 148
>SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2)
Length = 694
Score = 27.1 bits (57), Expect = 9.4
Identities = 27/96 (28%), Positives = 41/96 (42%)
Frame = +1
Query: 190 MLKSFLLSGPNAIV*RRSNRYPCRPTPGSSSRTLGSRCATTRQRPHLRSPSGIFKRTTPA 369
+++ FLLS IV + RP + + T + AT P +R+P + + TPA
Sbjct: 116 LIEFFLLSA-KTIVSSCLDTLLVRPLETTPAPTTPTSPATPASGPPIRTPIPLKETPTPA 174
Query: 370 GTSAKC*CP*ATRSPLKWSSRSGGPPSYRTIPPGQS 477
SA P AT + W + +RT P S
Sbjct: 175 LESAPAAMPDATDT--AWVTAKARLYFFRTCRPSPS 208
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/70 (21%), Positives = 30/70 (42%)
Frame = +3
Query: 309 DEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASE 488
D T L + + +DAG YQC ++ + + L+V P+++ +
Sbjct: 357 DIVTYNSDLFLISVDFSDAGLYQCIASNKYGSQFSKKARLEVLEFPVLT-RKPHDVSVHV 415
Query: 489 GXSVQMECYA 518
G +++ C A
Sbjct: 416 GGLIKLPCAA 425
>SB_40811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.1 bits (57), Expect = 9.4
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +3
Query: 135 QEQIRDIGGQVDLECSVHYAQEFPVVW 215
Q+++ D G + C VH+ ++ V W
Sbjct: 37 QDRVNDNGANICRNCGVHHGYDYAVEW 63
>SB_40687| Best HMM Match : PADR1 (HMM E-Value=0.23)
Length = 733
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -3
Query: 270 RRWSTGVSIRSS--SNDRVWSRQQETLEHNARNIPGLP 163
++W+ +IR + VW Q +EH+ +N P LP
Sbjct: 471 KKWAQRENIRPTPLKYRDVWQAAQRLIEHHRKNYPPLP 508
>SB_30961| Best HMM Match : I-set (HMM E-Value=0)
Length = 1018
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 348 IQENDAGWYQCQVLMSISNKIAAEVELQVR-RPPIISDNSTRSIVASEGXSVQMECYA 518
I +D G Y C S ++A L V+ +P I++ SI+ EG + + C A
Sbjct: 210 IDRHDGGEYTCTANNSFGKPVSASFFLTVQYKPSIVTSPRNHSIL--EGTRLSLYCNA 265
>SB_1675| Best HMM Match : ig (HMM E-Value=5.6e-05)
Length = 964
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 294 FSLRHDEATATFTLSIRDIQENDAGWYQCQV 386
F DE T L+I + D+G YQC V
Sbjct: 265 FDTDFDENRVTSKLNIAKLNNTDSGLYQCNV 295
>SB_20844| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 2675
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 282 KDSRFSLRHDE--ATATFTLSIRDIQENDAGWYQCQVL 389
KDS+ L +E + + +SI+ + +DAG Y+CQ +
Sbjct: 815 KDSQLILNGNERISISPGQISIKSVLPSDAGLYECQAI 852
>SB_8687| Best HMM Match : RCSD (HMM E-Value=0.25)
Length = 476
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = +1
Query: 295 SRCATTRQRPHLRSPSGIFKRTTP-----AGTSAKC*CP*ATRSPLKWSSRSGGPPSYRT 459
S+C T P + + T+P G +AKC CP +SP+ R G P+
Sbjct: 217 SKCGETNDEPCKKCQTNKCAATSPQKCDVTGQAAKCACPKQNQSPV--MQRVFGIPAVMV 274
Query: 460 IP 465
+P
Sbjct: 275 LP 276
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,496,286
Number of Sequences: 59808
Number of extensions: 451768
Number of successful extensions: 1507
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1500
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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