Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304G12f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 36 0.018
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 36 0.018
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 36 0.018
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 36 0.018
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 36 0.018
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 35 0.031
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 35 0.031
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 35 0.031
Z81045-4|CAB54202.2| 402|Caenorhabditis elegans Hypothetical pr... 34 0.054
AL110487-13|CAB54429.2| 268|Caenorhabditis elegans Hypothetical... 34 0.071
AF456253-1|AAL59611.1| 268|Caenorhabditis elegans secreted 2-im... 34 0.071
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 33 0.094
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 33 0.094
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 33 0.094
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 33 0.094
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 33 0.094
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 33 0.094
Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical pr... 32 0.29
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 31 0.38
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 31 0.50
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 31 0.50
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 31 0.50
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 31 0.50
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p... 31 0.66
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z81045-3|CAB02817.3| 280|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p... 31 0.66
EF584656-1|ABQ57414.1| 500|Caenorhabditis elegans LAD-2 short i... 31 0.66
EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long is... 31 0.66
AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobuli... 31 0.66
AC024817-51|AAP68914.1| 496|Caenorhabditis elegans L1 cam adhes... 31 0.66
AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhes... 31 0.66
Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical pr... 30 0.87
U41530-1|AAA83273.3| 636|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr... 28 3.5
U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1... 28 3.5
U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1... 28 3.5
AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR... 28 3.5
AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein. 28 3.5
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 28 4.7
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 28 4.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 4.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 4.7
Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z68005-3|CAA91990.1| 1227|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical pr... 27 8.1
AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 35.9 bits (79), Expect = 0.018
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQME 509
TL I + +ND G Y C V+ + + + V+ PPII ++ + A G V+++
Sbjct: 1325 TLRIYEADKNDIGNYNC-VVTNEAGTSQMTTHVDVQEPPIILPSTQTNNTAVVGDRVELK 1383
Query: 510 CY 515
CY
Sbjct: 1384 CY 1385
Score = 30.7 bits (66), Expect = 0.66
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQMEC 512
L IRD +D G Y+C+ MS + + +L + PP + + +V G V EC
Sbjct: 666 LYIRDATHHDEGTYECRA-MSQAGQARDTTDLMLATPPKVEIIQNKMMV-GRGDRVSFEC 723
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 279 IKDSRFSLRHDEATATF--TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRP 443
++DS +++++E TL+IR++ +D G+Y C KIA +L V +P
Sbjct: 4444 MRDSNIAIQNNEKYQILGTTLAIRNVLPDDDGFYHCIAKSDAGQKIATR-KLIVNKP 4499
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPP-IISDNSTRSIVASEGXSVQME 509
L+I ++ END G Y C+V + + + + + + V PP II + ++ A E +V +
Sbjct: 2251 LTILNVTENDEGQYSCRV-KNDAGENSFDFKATVLVPPTIIMLDKDKNKTAVEHSTVTLS 2309
Query: 510 CYA 518
C A
Sbjct: 2310 CPA 2312
Score = 27.5 bits (58), Expect = 6.2
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Frame = +3
Query: 153 IGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFT 332
+G ++L C+V A + + W K + I PL H+ T+ +T
Sbjct: 442 VGRDLNLSCTVESASAYTIYWVKTG--EDIIGGPL--------------FYHNTDTSVWT 485
Query: 333 LSIRDIQENDAGWYQCQVLMSISN-KIAAEVELQVRRPPIISDNSTRSIVASEGXSVQME 509
I ++ DAG Y+C+V+ + N + VE + P I R++ G + +
Sbjct: 486 --IPELSLKDAGEYECRVISNNGNYSVKTRVETRESPPEIF---GVRNVSVPLGEAAFLH 540
Query: 510 C 512
C
Sbjct: 541 C 541
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 35.9 bits (79), Expect = 0.018
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQME 509
TL I + +ND G Y C V+ + + + V+ PPII ++ + A G V+++
Sbjct: 1325 TLRIYEADKNDIGNYNC-VVTNEAGTSQMTTHVDVQEPPIILPSTQTNNTAVVGDRVELK 1383
Query: 510 CY 515
CY
Sbjct: 1384 CY 1385
Score = 30.7 bits (66), Expect = 0.66
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQMEC 512
L IRD +D G Y+C+ MS + + +L + PP + + +V G V EC
Sbjct: 666 LYIRDATHHDEGTYECRA-MSQAGQARDTTDLMLATPPKVEIIQNKMMV-GRGDRVSFEC 723
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 279 IKDSRFSLRHDEATATF--TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRP 443
++DS +++++E TL+IR++ +D G+Y C KIA +L V +P
Sbjct: 4444 MRDSNIAIQNNEKYQILGTTLAIRNVLPDDDGFYHCIAKSDAGQKIATR-KLIVNKP 4499
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPP-IISDNSTRSIVASEGXSVQME 509
L+I ++ END G Y C+V + + + + + + V PP II + ++ A E +V +
Sbjct: 2251 LTILNVTENDEGQYSCRV-KNDAGENSFDFKATVLVPPTIIMLDKDKNKTAVEHSTVTLS 2309
Query: 510 CYA 518
C A
Sbjct: 2310 CPA 2312
Score = 27.5 bits (58), Expect = 6.2
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Frame = +3
Query: 153 IGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFT 332
+G ++L C+V A + + W K + I PL H+ T+ +T
Sbjct: 442 VGRDLNLSCTVESASAYTIYWVKTG--EDIIGGPL--------------FYHNTDTSVWT 485
Query: 333 LSIRDIQENDAGWYQCQVLMSISN-KIAAEVELQVRRPPIISDNSTRSIVASEGXSVQME 509
I ++ DAG Y+C+V+ + N + VE + P I R++ G + +
Sbjct: 486 --IPELSLKDAGEYECRVISNNGNYSVKTRVETRESPPEIF---GVRNVSVPLGEAAFLH 540
Query: 510 C 512
C
Sbjct: 541 C 541
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 35.9 bits (79), Expect = 0.018
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQME 509
TL I + +ND G Y C V+ + + + V+ PPII ++ + A G V+++
Sbjct: 1325 TLRIYEADKNDIGNYNC-VVTNEAGTSQMTTHVDVQEPPIILPSTQTNNTAVVGDRVELK 1383
Query: 510 CY 515
CY
Sbjct: 1384 CY 1385
Score = 30.7 bits (66), Expect = 0.66
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQMEC 512
L IRD +D G Y+C+ MS + + +L + PP + + +V G V EC
Sbjct: 666 LYIRDATHHDEGTYECRA-MSQAGQARDTTDLMLATPPKVEIIQNKMMV-GRGDRVSFEC 723
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 279 IKDSRFSLRHDEATATF--TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRP 443
++DS +++++E TL+IR++ +D G+Y C KIA +L V +P
Sbjct: 4444 MRDSNIAIQNNEKYQILGTTLAIRNVLPDDDGFYHCIAKSDAGQKIATR-KLIVNKP 4499
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPP-IISDNSTRSIVASEGXSVQME 509
L+I ++ END G Y C+V + + + + + + V PP II + ++ A E +V +
Sbjct: 2251 LTILNVTENDEGQYSCRV-KNDAGENSFDFKATVLVPPTIIMLDKDKNKTAVEHSTVTLS 2309
Query: 510 CYA 518
C A
Sbjct: 2310 CPA 2312
Score = 27.5 bits (58), Expect = 6.2
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Frame = +3
Query: 153 IGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFT 332
+G ++L C+V A + + W K + I PL H+ T+ +T
Sbjct: 442 VGRDLNLSCTVESASAYTIYWVKTG--EDIIGGPL--------------FYHNTDTSVWT 485
Query: 333 LSIRDIQENDAGWYQCQVLMSISN-KIAAEVELQVRRPPIISDNSTRSIVASEGXSVQME 509
I ++ DAG Y+C+V+ + N + VE + P I R++ G + +
Sbjct: 486 --IPELSLKDAGEYECRVISNNGNYSVKTRVETRESPPEIF---GVRNVSVPLGEAAFLH 540
Query: 510 C 512
C
Sbjct: 541 C 541
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 35.9 bits (79), Expect = 0.018
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQME 509
TL I + +ND G Y C V+ + + + V+ PPII ++ + A G V+++
Sbjct: 1325 TLRIYEADKNDIGNYNC-VVTNEAGTSQMTTHVDVQEPPIILPSTQTNNTAVVGDRVELK 1383
Query: 510 CY 515
CY
Sbjct: 1384 CY 1385
Score = 30.7 bits (66), Expect = 0.66
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQMEC 512
L IRD +D G Y+C+ MS + + +L + PP + + +V G V EC
Sbjct: 666 LYIRDATHHDEGTYECRA-MSQAGQARDTTDLMLATPPKVEIIQNKMMV-GRGDRVSFEC 723
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 279 IKDSRFSLRHDEATATF--TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRP 443
++DS +++++E TL+IR++ +D G+Y C KIA +L V +P
Sbjct: 4444 MRDSNIAIQNNEKYQILGTTLAIRNVLPDDDGFYHCIAKSDAGQKIATR-KLIVNKP 4499
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPP-IISDNSTRSIVASEGXSVQME 509
L+I ++ END G Y C+V + + + + + + V PP II + ++ A E +V +
Sbjct: 2251 LTILNVTENDEGQYSCRV-KNDAGENSFDFKATVLVPPTIIMLDKDKNKTAVEHSTVTLS 2309
Query: 510 CYA 518
C A
Sbjct: 2310 CPA 2312
Score = 27.5 bits (58), Expect = 6.2
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Frame = +3
Query: 153 IGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFT 332
+G ++L C+V A + + W K + I PL H+ T+ +T
Sbjct: 442 VGRDLNLSCTVESASAYTIYWVKTG--EDIIGGPL--------------FYHNTDTSVWT 485
Query: 333 LSIRDIQENDAGWYQCQVLMSISN-KIAAEVELQVRRPPIISDNSTRSIVASEGXSVQME 509
I ++ DAG Y+C+V+ + N + VE + P I R++ G + +
Sbjct: 486 --IPELSLKDAGEYECRVISNNGNYSVKTRVETRESPPEIF---GVRNVSVPLGEAAFLH 540
Query: 510 C 512
C
Sbjct: 541 C 541
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 35.9 bits (79), Expect = 0.018
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 330 TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQME 509
TL I + +ND G Y C V+ + + + V+ PPII ++ + A G V+++
Sbjct: 1325 TLRIYEADKNDIGNYNC-VVTNEAGTSQMTTHVDVQEPPIILPSTQTNNTAVVGDRVELK 1383
Query: 510 CY 515
CY
Sbjct: 1384 CY 1385
Score = 30.7 bits (66), Expect = 0.66
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQMEC 512
L IRD +D G Y+C+ MS + + +L + PP + + +V G V EC
Sbjct: 666 LYIRDATHHDEGTYECRA-MSQAGQARDTTDLMLATPPKVEIIQNKMMV-GRGDRVSFEC 723
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 279 IKDSRFSLRHDEATATF--TLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRP 443
++DS +++++E TL+IR++ +D G+Y C KIA +L V +P
Sbjct: 4444 MRDSNIAIQNNEKYQILGTTLAIRNVLPDDDGFYHCIAKSDAGQKIATR-KLIVNKP 4499
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPP-IISDNSTRSIVASEGXSVQME 509
L+I ++ END G Y C+V + + + + + + V PP II + ++ A E +V +
Sbjct: 2251 LTILNVTENDEGQYSCRV-KNDAGENSFDFKATVLVPPTIIMLDKDKNKTAVEHSTVTLS 2309
Query: 510 CYA 518
C A
Sbjct: 2310 CPA 2312
Score = 27.5 bits (58), Expect = 6.2
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Frame = +3
Query: 153 IGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFT 332
+G ++L C+V A + + W K + I PL H+ T+ +T
Sbjct: 442 VGRDLNLSCTVESASAYTIYWVKTG--EDIIGGPL--------------FYHNTDTSVWT 485
Query: 333 LSIRDIQENDAGWYQCQVLMSISN-KIAAEVELQVRRPPIISDNSTRSIVASEGXSVQME 509
I ++ DAG Y+C+V+ + N + VE + P I R++ G + +
Sbjct: 486 --IPELSLKDAGEYECRVISNNGNYSVKTRVETRESPPEIF---GVRNVSVPLGEAAFLH 540
Query: 510 C 512
C
Sbjct: 541 C 541
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 35.1 bits (77), Expect = 0.031
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQC--QVLMSISNKIAAEVELQVRR-PPIISDNSTRSIVASEGXSVQ 503
L I+ +E D G Y+C + + +++ AA + ++VRR PP S R V G ++
Sbjct: 210 LMIQHAREEDQGKYECIARNTLGVAHSKAANLYVKVRRVPPYFSYKLERQYVVGVGGNIN 269
Query: 504 MECYA 518
+ C A
Sbjct: 270 LTCVA 274
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 35.1 bits (77), Expect = 0.031
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQC--QVLMSISNKIAAEVELQVRR-PPIISDNSTRSIVASEGXSVQ 503
L I+ +E D G Y+C + + +++ AA + ++VRR PP S R V G ++
Sbjct: 210 LMIQHAREEDQGKYECIARNTLGVAHSKAANLYVKVRRVPPYFSYKLERQYVVGVGGNIN 269
Query: 504 MECYA 518
+ C A
Sbjct: 270 LTCVA 274
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 35.1 bits (77), Expect = 0.031
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQC--QVLMSISNKIAAEVELQVRR-PPIISDNSTRSIVASEGXSVQ 503
L I+ +E D G Y+C + + +++ AA + ++VRR PP S R V G ++
Sbjct: 210 LMIQHAREEDQGKYECIARNTLGVAHSKAANLYVKVRRVPPYFSYKLERQYVVGVGGNIN 269
Query: 504 MECYA 518
+ C A
Sbjct: 270 LTCVA 274
>Z81045-4|CAB54202.2| 402|Caenorhabditis elegans Hypothetical
protein C36F7.4b protein.
Length = 402
Score = 34.3 bits (75), Expect = 0.054
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Frame = +3
Query: 42 MDRNIYVFYTL---LLYFTCNVSAQRTPTISHITQEQ-IRDIGGQVDLECSVHYAQEFPV 209
+ +Y+F L LL F S PTI + + +G VD C V+ V
Sbjct: 57 LQEKMYLFALLCGVLLVFKQACSRGAPPTIQQPSMSSAVALLGQDVDFTCIVNDLGSHMV 116
Query: 210 VWTKRDRLKTIESIPLSTNAGLIIKDSRFSL--RHDEATATFTLSIRDIQENDAGWYQCQ 383
+ K D + LS + + + +++ L R + + L+I+++QE+D G Y CQ
Sbjct: 117 AFVKADSPPRL----LSFDEKVFRRRNKYELKPRIGDLHNEWVLTIKNVQESDRGNYSCQ 172
Query: 384 V 386
+
Sbjct: 173 I 173
>AL110487-13|CAB54429.2| 268|Caenorhabditis elegans Hypothetical
protein Y39E4B.8 protein.
Length = 268
Score = 33.9 bits (74), Expect = 0.071
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Frame = +3
Query: 171 LECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFTLSIRDI 350
L CSV E + WT+ + L+ +D R+ + A + L++R
Sbjct: 55 LHCSVPPDAEHEIAWTR-----VSDGALLTAGNRTFTRDPRWQVSKKSANI-WVLNLRRA 108
Query: 351 QENDAGWYQCQVLMSISNKIAAEVELQVRRPPI-----ISDNSTRSIVASEGXSVQMEC 512
++ D+G Y C++ + + V L+V PP+ + ST+ + G V + C
Sbjct: 109 EQQDSGCYLCEI--NDKHNTVYAVYLKVLEPPLPSPSSLQKKSTKLMANMSGDEVVLNC 165
>AF456253-1|AAL59611.1| 268|Caenorhabditis elegans secreted
2-immunoglobulin-domainprotein ZIG-8 protein.
Length = 268
Score = 33.9 bits (74), Expect = 0.071
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Frame = +3
Query: 171 LECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFTLSIRDI 350
L CSV E + WT+ + L+ +D R+ + A + L++R
Sbjct: 55 LHCSVPPDAEHEIAWTR-----VSDGALLTAGNRTFTRDPRWQVSKKSANI-WVLNLRRA 108
Query: 351 QENDAGWYQCQVLMSISNKIAAEVELQVRRPPI-----ISDNSTRSIVASEGXSVQMEC 512
++ D+G Y C++ + + V L+V PP+ + ST+ + G V + C
Sbjct: 109 EQQDSGCYLCEI--NDKHNTVYAVYLKVLEPPLPSPSSLQKKSTKLMANMSGDEVVLNC 165
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 33.5 bits (73), Expect = 0.094
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 246 SIPLSTNAGLIIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQC 380
S+ S + G +I+DSRF ++ + + L I++ +D G Y+C
Sbjct: 5625 SVKWSKDGGPLIEDSRFEWSNEASKGVYQLRIKNATVHDEGTYRC 5669
Score = 28.3 bits (60), Expect = 3.5
Identities = 29/97 (29%), Positives = 42/97 (43%)
Frame = +3
Query: 156 GGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFTL 335
G +D EC V E +VW D+ PL + F L++D TA L
Sbjct: 662 GDVIDFECEVEGWPEPELVWLVDDQ-------PLRPSHD-------FRLQYDGQTAK--L 705
Query: 336 SIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPP 446
IRD Q +D G Y ++ + I ++ EL V+ P
Sbjct: 706 EIRDAQPDDTGVYTVKIQNEFGS-IESKAELFVQADP 741
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +3
Query: 276 IIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQV---LMSISNKIAAEVELQVRRPP 446
+ +D ++ + T FTL ++ DAG Y + + + AEV + +P
Sbjct: 3228 VSEDGNHEMKKNPETGVFTLVVKQAATTDAGKYTAKASNPAGTAESSAEAEVTQSLEKPT 3287
Query: 447 IISDNSTRSIVASE 488
+ + T + +E
Sbjct: 3288 FVRELVTTEVKINE 3301
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 285 DSRFSLRHDEATATFTLSIRDIQENDAGWYQCQ 383
D+ ++ A +F+L+I D ++ D G Y C+
Sbjct: 3427 DNVHVIQKQTAVGSFSLTINDARQGDVGIYSCR 3459
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 33.5 bits (73), Expect = 0.094
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 246 SIPLSTNAGLIIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQC 380
S+ S + G +I+DSRF ++ + + L I++ +D G Y+C
Sbjct: 4985 SVKWSKDGGPLIEDSRFEWSNEASKGVYQLRIKNATVHDEGTYRC 5029
Score = 28.3 bits (60), Expect = 3.5
Identities = 29/97 (29%), Positives = 42/97 (43%)
Frame = +3
Query: 156 GGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFTL 335
G +D EC V E +VW D+ PL + F L++D TA L
Sbjct: 662 GDVIDFECEVEGWPEPELVWLVDDQ-------PLRPSHD-------FRLQYDGQTAK--L 705
Query: 336 SIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPP 446
IRD Q +D G Y ++ + I ++ EL V+ P
Sbjct: 706 EIRDAQPDDTGVYTVKIQNEFGS-IESKAELFVQADP 741
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +3
Query: 276 IIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQV---LMSISNKIAAEVELQVRRPP 446
+ +D ++ + T FTL ++ DAG Y + + + AEV + +P
Sbjct: 2588 VSEDGNHEMKKNPETGVFTLVVKQAATTDAGKYTAKASNPAGTAESSAEAEVTQSLEKPT 2647
Query: 447 IISDNSTRSIVASE 488
+ + T + +E
Sbjct: 2648 FVRELVTTEVKINE 2661
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 285 DSRFSLRHDEATATFTLSIRDIQENDAGWYQCQ 383
D+ ++ A +F+L+I D ++ D G Y C+
Sbjct: 2787 DNVHVIQKQTAVGSFSLTINDARQGDVGIYSCR 2819
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 33.5 bits (73), Expect = 0.094
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 246 SIPLSTNAGLIIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQC 380
S+ S + G +I+DSRF ++ + + L I++ +D G Y+C
Sbjct: 5625 SVKWSKDGGPLIEDSRFEWSNEASKGVYQLRIKNATVHDEGTYRC 5669
Score = 28.3 bits (60), Expect = 3.5
Identities = 29/97 (29%), Positives = 42/97 (43%)
Frame = +3
Query: 156 GGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFTL 335
G +D EC V E +VW D+ PL + F L++D TA L
Sbjct: 662 GDVIDFECEVEGWPEPELVWLVDDQ-------PLRPSHD-------FRLQYDGQTAK--L 705
Query: 336 SIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPP 446
IRD Q +D G Y ++ + I ++ EL V+ P
Sbjct: 706 EIRDAQPDDTGVYTVKIQNEFGS-IESKAELFVQADP 741
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +3
Query: 276 IIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQV---LMSISNKIAAEVELQVRRPP 446
+ +D ++ + T FTL ++ DAG Y + + + AEV + +P
Sbjct: 3228 VSEDGNHEMKKNPETGVFTLVVKQAATTDAGKYTAKASNPAGTAESSAEAEVTQSLEKPT 3287
Query: 447 IISDNSTRSIVASE 488
+ + T + +E
Sbjct: 3288 FVRELVTTEVKINE 3301
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 285 DSRFSLRHDEATATFTLSIRDIQENDAGWYQCQ 383
D+ ++ A +F+L+I D ++ D G Y C+
Sbjct: 3427 DNVHVIQKQTAVGSFSLTINDARQGDVGIYSCR 3459
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 33.5 bits (73), Expect = 0.094
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 246 SIPLSTNAGLIIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQC 380
S+ S + G +I+DSRF ++ + + L I++ +D G Y+C
Sbjct: 5625 SVKWSKDGGPLIEDSRFEWSNEASKGVYQLRIKNATVHDEGTYRC 5669
Score = 28.3 bits (60), Expect = 3.5
Identities = 29/97 (29%), Positives = 42/97 (43%)
Frame = +3
Query: 156 GGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFTL 335
G +D EC V E +VW D+ PL + F L++D TA L
Sbjct: 662 GDVIDFECEVEGWPEPELVWLVDDQ-------PLRPSHD-------FRLQYDGQTAK--L 705
Query: 336 SIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPP 446
IRD Q +D G Y ++ + I ++ EL V+ P
Sbjct: 706 EIRDAQPDDTGVYTVKIQNEFGS-IESKAELFVQADP 741
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +3
Query: 276 IIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQV---LMSISNKIAAEVELQVRRPP 446
+ +D ++ + T FTL ++ DAG Y + + + AEV + +P
Sbjct: 3228 VSEDGNHEMKKNPETGVFTLVVKQAATTDAGKYTAKASNPAGTAESSAEAEVTQSLEKPT 3287
Query: 447 IISDNSTRSIVASE 488
+ + T + +E
Sbjct: 3288 FVRELVTTEVKINE 3301
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 285 DSRFSLRHDEATATFTLSIRDIQENDAGWYQCQ 383
D+ ++ A +F+L+I D ++ D G Y C+
Sbjct: 3427 DNVHVIQKQTAVGSFSLTINDARQGDVGIYSCR 3459
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 33.5 bits (73), Expect = 0.094
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +3
Query: 153 IGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFT 332
+G +DLEC V V W+K + G +I+DSRF ++ + +
Sbjct: 4968 LGNVIDLECKVTGLPNPSVKWSK--------------DGGPLIEDSRFEWSNEASKGVYQ 5013
Query: 333 LSIRDIQENDAGWYQC 380
L I++ +D G Y+C
Sbjct: 5014 LRIKNATVHDEGTYRC 5029
Score = 28.3 bits (60), Expect = 3.5
Identities = 29/97 (29%), Positives = 42/97 (43%)
Frame = +3
Query: 156 GGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFTL 335
G +D EC V E +VW D+ PL + F L++D TA L
Sbjct: 662 GDVIDFECEVEGWPEPELVWLVDDQ-------PLRPSHD-------FRLQYDGQTAK--L 705
Query: 336 SIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPP 446
IRD Q +D G Y ++ + I ++ EL V+ P
Sbjct: 706 EIRDAQPDDTGVYTVKIQNEFGS-IESKAELFVQADP 741
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +3
Query: 276 IIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQV---LMSISNKIAAEVELQVRRPP 446
+ +D ++ + T FTL ++ DAG Y + + + AEV + +P
Sbjct: 2588 VSEDGNHEMKKNPETGVFTLVVKQAATTDAGKYTAKASNPAGTAESSAEAEVTQSLEKPT 2647
Query: 447 IISDNSTRSIVASE 488
+ + T + +E
Sbjct: 2648 FVRELVTTEVKINE 2661
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 285 DSRFSLRHDEATATFTLSIRDIQENDAGWYQCQ 383
D+ ++ A +F+L+I D ++ D G Y C+
Sbjct: 2787 DNVHVIQKQTAVGSFSLTINDARQGDVGIYSCR 2819
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 33.5 bits (73), Expect = 0.094
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +3
Query: 153 IGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFT 332
+G +DLEC V V W+K + G +I+DSRF ++ + +
Sbjct: 5608 LGNVIDLECKVTGLPNPSVKWSK--------------DGGPLIEDSRFEWSNEASKGVYQ 5653
Query: 333 LSIRDIQENDAGWYQC 380
L I++ +D G Y+C
Sbjct: 5654 LRIKNATVHDEGTYRC 5669
Score = 28.3 bits (60), Expect = 3.5
Identities = 29/97 (29%), Positives = 42/97 (43%)
Frame = +3
Query: 156 GGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFTL 335
G +D EC V E +VW D+ PL + F L++D TA L
Sbjct: 662 GDVIDFECEVEGWPEPELVWLVDDQ-------PLRPSHD-------FRLQYDGQTAK--L 705
Query: 336 SIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPP 446
IRD Q +D G Y ++ + I ++ EL V+ P
Sbjct: 706 EIRDAQPDDTGVYTVKIQNEFGS-IESKAELFVQADP 741
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +3
Query: 276 IIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQCQV---LMSISNKIAAEVELQVRRPP 446
+ +D ++ + T FTL ++ DAG Y + + + AEV + +P
Sbjct: 3228 VSEDGNHEMKKNPETGVFTLVVKQAATTDAGKYTAKASNPAGTAESSAEAEVTQSLEKPT 3287
Query: 447 IISDNSTRSIVASE 488
+ + T + +E
Sbjct: 3288 FVRELVTTEVKINE 3301
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 285 DSRFSLRHDEATATFTLSIRDIQENDAGWYQCQ 383
D+ ++ A +F+L+I D ++ D G Y C+
Sbjct: 3427 DNVHVIQKQTAVGSFSLTINDARQGDVGIYSCR 3459
>Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical
protein F59F3.5 protein.
Length = 1199
Score = 31.9 bits (69), Expect = 0.29
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQCQVL-MSISNKIAAEVELQVRRPPIISDNSTRSIV-ASEGXSVQM 506
L++R+I + G Y C V ++ + ++ PP + +N++RSI+ AS G +
Sbjct: 643 LNVRNITIDFTGTYYCIVKNKEFEHRFETSISVEKVSPPFLLNNNSRSIISASNGQMFDI 702
Query: 507 EC 512
C
Sbjct: 703 NC 704
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 31.5 bits (68), Expect = 0.38
Identities = 22/111 (19%), Positives = 42/111 (37%)
Frame = +3
Query: 114 PTISHITQEQIRDIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSR 293
P + + E + +G + L+CSV + W K + T + L+ + IK
Sbjct: 324 PILKDLPNEIQKTVGSSLSLKCSVKKKSSMDIKWYKNGLMMTTQRGKLTIDR---IKQDD 380
Query: 294 FSLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPP 446
F L EAT + + + + + ++ E E+ + PP
Sbjct: 381 FGLYQCEATNAAGADLASVWVKEGEANETVATEMSEDGMSLEEEISMETPP 431
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 31.1 bits (67), Expect = 0.50
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 2/125 (1%)
Frame = +3
Query: 144 IRDIGGQVD-LECSVHYAQEFPVV-WTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEA 317
++ +GG++ LECS PVV W K D+ I+ +P R++L D
Sbjct: 142 VQALGGEMAVLECSPPRGFPEPVVSWRKDDKELRIQDMP------------RYTLHSDG- 188
Query: 318 TATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXS 497
L I + +D+G YQC + +++ L V P + + + G +
Sbjct: 189 ----NLIIDPVDRSDSGTYQCVANNMVGERVSNPARLSVFEKPKF-EQEPKDMTVDVGAA 243
Query: 498 VQMEC 512
V +C
Sbjct: 244 VLFDC 248
Score = 29.5 bits (63), Expect = 1.5
Identities = 28/98 (28%), Positives = 41/98 (41%)
Frame = +3
Query: 87 TCNVSAQRTPTISHITQEQIRDIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTN 266
T N A+ PTI H Q Q +G L C + W + + +P+
Sbjct: 416 TGNTPAKPPPTIEHGHQNQTLMVGSSAILPCQASGKPTPGISWLR-------DGLPID-- 466
Query: 267 AGLIIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQC 380
I DSR S +H +T +L I D+++ D G Y C
Sbjct: 467 ----ITDSRIS-QH----STGSLHIADLKKPDTGVYTC 495
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 31.1 bits (67), Expect = 0.50
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 2/125 (1%)
Frame = +3
Query: 144 IRDIGGQVD-LECSVHYAQEFPVV-WTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEA 317
++ +GG++ LECS PVV W K D+ I+ +P R++L D
Sbjct: 142 VQALGGEMAVLECSPPRGFPEPVVSWRKDDKELRIQDMP------------RYTLHSDG- 188
Query: 318 TATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXS 497
L I + +D+G YQC + +++ L V P + + + G +
Sbjct: 189 ----NLIIDPVDRSDSGTYQCVANNMVGERVSNPARLSVFEKPKF-EQEPKDMTVDVGAA 243
Query: 498 VQMEC 512
V +C
Sbjct: 244 VLFDC 248
Score = 29.5 bits (63), Expect = 1.5
Identities = 28/98 (28%), Positives = 41/98 (41%)
Frame = +3
Query: 87 TCNVSAQRTPTISHITQEQIRDIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTN 266
T N A+ PTI H Q Q +G L C + W + + +P+
Sbjct: 416 TGNTPAKPPPTIEHGHQNQTLMVGSSAILPCQASGKPTPGISWLR-------DGLPID-- 466
Query: 267 AGLIIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQC 380
I DSR S +H +T +L I D+++ D G Y C
Sbjct: 467 ----ITDSRIS-QH----STGSLHIADLKKPDTGVYTC 495
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 31.1 bits (67), Expect = 0.50
Identities = 29/86 (33%), Positives = 42/86 (48%)
Frame = +1
Query: 241 SNRYPCRPTPGSSSRTLGSRCATTRQRPHLRSPSGIFKRTTPAGTSAKC*CP*ATRSPLK 420
S++ P SS GS T +Q +SP TT G+S P +T++P
Sbjct: 945 SSQSPTSSPAQQSSTPAGSSTVTVQQSSSFQSPQS----TTQIGSSTTV--P-STQAP-- 995
Query: 421 WSSRSGGPPSYRTIPPGQSSLAKGKV 498
SS SGGP + + I P Q ++ KG+V
Sbjct: 996 -SSTSGGPTTTQ-ICPNQQTVFKGQV 1019
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 31.1 bits (67), Expect = 0.50
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 2/125 (1%)
Frame = +3
Query: 144 IRDIGGQVD-LECSVHYAQEFPVV-WTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEA 317
++ +GG++ LECS PVV W K D+ I+ +P R++L D
Sbjct: 142 VQALGGEMAVLECSPPRGFPEPVVSWRKDDKELRIQDMP------------RYTLHSDG- 188
Query: 318 TATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXS 497
L I + +D+G YQC + +++ L V P + + + G +
Sbjct: 189 ----NLIIDPVDRSDSGTYQCVANNMVGERVSNPARLSVFEKPKF-EQEPKDMTVDVGAA 243
Query: 498 VQMEC 512
V +C
Sbjct: 244 VLFDC 248
Score = 29.5 bits (63), Expect = 1.5
Identities = 28/98 (28%), Positives = 41/98 (41%)
Frame = +3
Query: 87 TCNVSAQRTPTISHITQEQIRDIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTN 266
T N A+ PTI H Q Q +G L C + W + + +P+
Sbjct: 416 TGNTPAKPPPTIEHGHQNQTLMVGSSAILPCQASGKPTPGISWLR-------DGLPID-- 466
Query: 267 AGLIIKDSRFSLRHDEATATFTLSIRDIQENDAGWYQC 380
I DSR S +H +T +L I D+++ D G Y C
Sbjct: 467 ----ITDSRIS-QH----STGSLHIADLKKPDTGVYTC 495
>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 30.7 bits (66), Expect = 0.66
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 297 SLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVEL 428
+L+ EA IR +++ DAG+Y+C V S +++ A E+
Sbjct: 845 NLKKTEAGYVAKWHIRKVKQEDAGFYKCVVTSSDGSRVEASSEV 888
>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical
protein T04A11.3 protein.
Length = 1014
Score = 30.7 bits (66), Expect = 0.66
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 297 SLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVEL 428
+L+ EA IR +++ DAG+Y+C V S +++ A E+
Sbjct: 651 NLKKTEAGYVAKWHIRKVKQEDAGFYKCVVTSSDGSRVEASSEV 694
>Z81045-3|CAB02817.3| 280|Caenorhabditis elegans Hypothetical
protein C36F7.4a protein.
Length = 280
Score = 30.7 bits (66), Expect = 0.66
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +3
Query: 153 IGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSRFSL--RHDEATAT 326
+G VD C V+ V + K D + LS + + + +++ L R +
Sbjct: 8 LGQDVDFTCIVNDLGSHMVAFVKADSPPRL----LSFDEKVFRRRNKYELKPRIGDLHNE 63
Query: 327 FTLSIRDIQENDAGWYQCQV 386
+ L+I+++QE+D G Y CQ+
Sbjct: 64 WVLTIKNVQESDRGNYSCQI 83
>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 30.7 bits (66), Expect = 0.66
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 297 SLRHDEATATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVEL 428
+L+ EA IR +++ DAG+Y+C V S +++ A E+
Sbjct: 845 NLKKTEAGYVAKWHIRKVKQEDAGFYKCVVTSSDGSRVEASSEV 888
>EF584656-1|ABQ57414.1| 500|Caenorhabditis elegans LAD-2 short
isoform protein.
Length = 500
Score = 30.7 bits (66), Expect = 0.66
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Frame = +3
Query: 156 GGQVDLECSVHYAQEFPVV-WTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFT 332
GGQ+ L+C + + P + W+K D +P S IKD L E+ +
Sbjct: 252 GGQLKLQC-IFGGRPLPTIFWSKIDG-----ELPKSR-----IKD----LTSHESDFGRS 296
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQMEC 512
L + ++ +DAG Y+C+ + V ++V P + R I E + ++EC
Sbjct: 297 LIVENVHPDDAGAYECR-----GRHLVHTVNVRVMAAPFWEFDPPRDISLPEESTGELEC 351
Query: 513 YAG 521
AG
Sbjct: 352 LAG 354
>EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long
isoform protein.
Length = 1187
Score = 30.7 bits (66), Expect = 0.66
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Frame = +3
Query: 156 GGQVDLECSVHYAQEFPVV-WTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFT 332
GGQ+ L+C + + P + W+K D +P S IKD L E+ +
Sbjct: 252 GGQLKLQC-IFGGRPLPTIFWSKIDG-----ELPKSR-----IKD----LTSHESDFGRS 296
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQMEC 512
L + ++ +DAG Y+C+ + V ++V P + R I E + ++EC
Sbjct: 297 LIVENVHPDDAGAYECR-----GRHLVHTVNVRVMAAPFWEFDPPRDISLPEESTGELEC 351
Query: 513 YAG 521
AG
Sbjct: 352 LAG 354
>AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobulin
domain-containingprotein Y54G2A.25 protein.
Length = 1187
Score = 30.7 bits (66), Expect = 0.66
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Frame = +3
Query: 156 GGQVDLECSVHYAQEFPVV-WTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFT 332
GGQ+ L+C + + P + W+K D +P S IKD L E+ +
Sbjct: 252 GGQLKLQC-IFGGRPLPTIFWSKIDG-----ELPKSR-----IKD----LTSHESDFGRS 296
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQMEC 512
L + ++ +DAG Y+C+ + V ++V P + R I E + ++EC
Sbjct: 297 LIVENVHPDDAGAYECR-----GRHLVHTVNVRVMAAPFWEFDPPRDISLPEESTGELEC 351
Query: 513 YAG 521
AG
Sbjct: 352 LAG 354
>AC024817-51|AAP68914.1| 496|Caenorhabditis elegans L1 cam adhesion
molecule homologprotein 2, isoform b protein.
Length = 496
Score = 30.7 bits (66), Expect = 0.66
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Frame = +3
Query: 156 GGQVDLECSVHYAQEFPVV-WTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFT 332
GGQ+ L+C + + P + W+K D +P S IKD L E+ +
Sbjct: 252 GGQLKLQC-IFGGRPLPTIFWSKIDG-----ELPKSR-----IKD----LTSHESDFGRS 296
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQMEC 512
L + ++ +DAG Y+C+ + V ++V P + R I E + ++EC
Sbjct: 297 LIVENVHPDDAGAYECR-----GRHLVHTVNVRVMAAPFWEFDPPRDISLPEESTGELEC 351
Query: 513 YAG 521
AG
Sbjct: 352 LAG 354
>AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhesion
molecule homologprotein 2, isoform a protein.
Length = 1187
Score = 30.7 bits (66), Expect = 0.66
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Frame = +3
Query: 156 GGQVDLECSVHYAQEFPVV-WTKRDRLKTIESIPLSTNAGLIIKDSRFSLRHDEATATFT 332
GGQ+ L+C + + P + W+K D +P S IKD L E+ +
Sbjct: 252 GGQLKLQC-IFGGRPLPTIFWSKIDG-----ELPKSR-----IKD----LTSHESDFGRS 296
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQMEC 512
L + ++ +DAG Y+C+ + V ++V P + R I E + ++EC
Sbjct: 297 LIVENVHPDDAGAYECR-----GRHLVHTVNVRVMAAPFWEFDPPRDISLPEESTGELEC 351
Query: 513 YAG 521
AG
Sbjct: 352 LAG 354
>Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical
protein F20D1.7 protein.
Length = 695
Score = 30.3 bits (65), Expect = 0.87
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 285 DSRFSLRHDEAT--ATFTLSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPI 449
D FS H+E + + ENDAG Y+C V S I ++EL+V +P I
Sbjct: 463 DPSFSRNHEERIHISNEYYGFDVVLENDAGHYEC-VSKSDMKTITRKIELEVVKPNI 518
>U41530-1|AAA83273.3| 636|Caenorhabditis elegans Hypothetical
protein SSSD1.1 protein.
Length = 636
Score = 30.3 bits (65), Expect = 0.87
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +3
Query: 333 LSIRDIQENDAGWYQCQVLMSISNKIAAEVELQVRRPPIISDNSTRSIVASEGXSVQMEC 512
LS++D++++D+GWY C+ S + +PP+ + I G V + C
Sbjct: 181 LSLQDVRKSDSGWYTCEAKNSAG---------ETTKPPVFTVAPPSEIKVRLGDQVSIPC 231
>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 187 CTEHSRSTWPPISLICSCVMC 125
C H T+ P+SLIC V+C
Sbjct: 19 CNRHFNETFLPVSLICGHVIC 39
>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 187 CTEHSRSTWPPISLICSCVMC 125
C H T+ P+SLIC V+C
Sbjct: 19 CNRHFNETFLPVSLICGHVIC 39
>U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1,
isoform c protein.
Length = 942
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 303 RHDEATATFTLSIRDIQENDAGWYQCQVLMSISN-KIAAEVELQVRRP 443
R E + + L I++ Q +D+G Y C+V S S+ + ++ +V+ P
Sbjct: 230 RVHEKYSCWELEIKNAQTSDSGSYMCRVTASASDLDVTDTMQFEVKAP 277
>U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1,
isoform a protein.
Length = 1409
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 303 RHDEATATFTLSIRDIQENDAGWYQCQVLMSISN-KIAAEVELQVRRP 443
R E + + L I++ Q +D+G Y C+V S S+ + ++ +V+ P
Sbjct: 230 RVHEKYSCWELEIKNAQTSDSGSYMCRVTASASDLDVTDTMQFEVKAP 277
>AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR-1
protein.
Length = 942
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 303 RHDEATATFTLSIRDIQENDAGWYQCQVLMSISN-KIAAEVELQVRRP 443
R E + + L I++ Q +D+G Y C+V S S+ + ++ +V+ P
Sbjct: 230 RVHEKYSCWELEIKNAQTSDSGSYMCRVTASASDLDVTDTMQFEVKAP 277
>AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein.
Length = 1409
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 303 RHDEATATFTLSIRDIQENDAGWYQCQVLMSISN-KIAAEVELQVRRP 443
R E + + L I++ Q +D+G Y C+V S S+ + ++ +V+ P
Sbjct: 230 RVHEKYSCWELEIKNAQTSDSGSYMCRVTASASDLDVTDTMQFEVKAP 277
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 27.9 bits (59), Expect = 4.7
Identities = 26/91 (28%), Positives = 36/91 (39%)
Frame = +3
Query: 114 PTISHITQEQIRDIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSR 293
PT+ + G Q+ L C + E V W K D + IES AG R
Sbjct: 1517 PTLQKALNNESAQAGQQIMLTCRISSRSESTVAWFKDD--ERIES------AG------R 1562
Query: 294 FSLRHDEATATFTLSIRDIQENDAGWYQCQV 386
+ L D+ + L +Q D G Y+C V
Sbjct: 1563 YELSSDK-KSNHKLVCHAVQSQDTGKYRCVV 1592
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 27.9 bits (59), Expect = 4.7
Identities = 26/91 (28%), Positives = 36/91 (39%)
Frame = +3
Query: 114 PTISHITQEQIRDIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSR 293
PT+ + G Q+ L C + E V W K D + IES AG R
Sbjct: 1532 PTLQKALNNESAQAGQQIMLTCRISSRSESTVAWFKDD--ERIES------AG------R 1577
Query: 294 FSLRHDEATATFTLSIRDIQENDAGWYQCQV 386
+ L D+ + L +Q D G Y+C V
Sbjct: 1578 YELSSDK-KSNHKLVCHAVQSQDTGKYRCVV 1607
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 4.7
Identities = 26/91 (28%), Positives = 36/91 (39%)
Frame = +3
Query: 114 PTISHITQEQIRDIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSR 293
PT+ + G Q+ L C + E V W K D + IES AG R
Sbjct: 17343 PTLQKALNNESAQAGQQIMLTCRISSRSESTVAWFKDD--ERIES------AG------R 17388
Query: 294 FSLRHDEATATFTLSIRDIQENDAGWYQCQV 386
+ L D+ + L +Q D G Y+C V
Sbjct: 17389 YELSSDK-KSNHKLVCHAVQSQDTGKYRCVV 17418
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 4.7
Identities = 26/91 (28%), Positives = 36/91 (39%)
Frame = +3
Query: 114 PTISHITQEQIRDIGGQVDLECSVHYAQEFPVVWTKRDRLKTIESIPLSTNAGLIIKDSR 293
PT+ + G Q+ L C + E V W K D + IES AG R
Sbjct: 17358 PTLQKALNNESAQAGQQIMLTCRISSRSESTVAWFKDD--ERIES------AG------R 17403
Query: 294 FSLRHDEATATFTLSIRDIQENDAGWYQCQV 386
+ L D+ + L +Q D G Y+C V
Sbjct: 17404 YELSSDK-KSNHKLVCHAVQSQDTGKYRCVV 17433
>Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical
protein H13N06.2 protein.
Length = 454
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +1
Query: 319 RPHLRSPSGIFKRTTPAGTSAKC*CP*ATRSPLKWSSRSGGPPSYRTIPPGQSS 480
RPH +SP TTP + P T +P S+ + G + PP QSS
Sbjct: 60 RPH-QSPGTSPVTTTPVAPTNSLPMPPGTSTPSLSSAENSGNGPHPPAPPPQSS 112
>Z68005-3|CAA91990.1| 1227|Caenorhabditis elegans Hypothetical
protein F59F3.1 protein.
Length = 1227
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 306 HDEATATFTLSIRDIQENDAGWYQC 380
+D+A L++ D++E+D G Y C
Sbjct: 86 YDDAFGDKVLTLNDVRESDTGTYSC 110
>Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical
protein F07A11.6d protein.
Length = 567
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 189 YAQEFPVVWTKRDRLKTIESI 251
++Q FP+VWT R LK+ E++
Sbjct: 376 FSQHFPMVWTGRLALKSTEAM 396
>AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical
protein Y92H12A.2 protein.
Length = 724
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 449 DGGPPDLELHFSGDLVAYGH-QHLALVPAGVVLLNIP 342
D P DLEL FS D +G Q++ L+P G N+P
Sbjct: 537 DNDPADLELTFSLDDSIFGETQNIELIPNGA---NVP 570
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,571,453
Number of Sequences: 27780
Number of extensions: 318021
Number of successful extensions: 1186
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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