Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304G11f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 30 1.1
At5g02900.1 68418.m00233 cytochrome P450, putative cytochrome P4... 29 1.4
At4g14780.1 68417.m02273 protein kinase, putative similar to pro... 29 1.4
At1g04430.1 68414.m00434 dehydration-responsive protein-related ... 29 1.4
At3g22750.1 68416.m02869 protein kinase, putative similar to pro... 29 1.9
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 29 1.9
At1g67025.1 68414.m07621 hypothetical protein 29 2.5
At4g18600.1 68417.m02755 expressed protein 28 3.3
At4g15490.1 68417.m02367 UDP-glucoronosyl/UDP-glucosyl transfera... 28 3.3
At3g63260.2 68416.m07109 protein kinase, putative (MRK1) identic... 28 3.3
At3g63260.1 68416.m07108 protein kinase, putative (MRK1) identic... 28 3.3
At3g18770.1 68416.m02382 expressed protein 28 3.3
At5g13520.1 68418.m01561 peptidase M1 family protein similar to ... 28 4.4
At4g16880.1 68417.m02548 disease resistance protein-related cont... 28 4.4
At4g15500.1 68417.m02368 UDP-glucoronosyl/UDP-glucosyl transfera... 28 4.4
At3g49830.1 68416.m05448 DNA helicase-related similar to DNA hel... 28 4.4
At1g70180.2 68414.m08076 sterile alpha motif (SAM) domain-contai... 28 4.4
At1g70180.1 68414.m08075 sterile alpha motif (SAM) domain-contai... 28 4.4
At5g41830.1 68418.m05093 F-box family protein-related contains a... 27 5.8
At1g10390.1 68414.m01171 nucleoporin family protein contains Pfa... 27 5.8
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 27 7.7
At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapie... 27 7.7
At1g66940.2 68414.m07609 protein kinase-related 27 7.7
At1g66940.1 68414.m07608 protein kinase-related 27 7.7
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -1
Query: 266 SGERVLTDAKMHAVFSPRVFDTTVVSLCGALQPRGLSLSEQYLGRCLLENGNLV 105
+G R+LT + + VFDT + +CG L+ G L+ + C+ + + V
Sbjct: 410 NGNRILTSGRDNV---HNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYV 460
>At5g02900.1 68418.m00233 cytochrome P450, putative cytochrome P450
homolog, Arabidopsis thaliana, PIR:T09367
Length = 480
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 248 TDAKMHAVFSPRVFDTTVVSLCGALQPRGLSL 153
T + VF +FDTT+V++ G+ PR LS+
Sbjct: 136 TVVDLQDVFKRFMFDTTLVTVTGSADPRSLSI 167
>At4g14780.1 68417.m02273 protein kinase, putative similar to
protein kinase ATMRK1 [Arabidopsis thaliana]
gi|2351097|dbj|BAA22079
Length = 364
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 339 SDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFELRCPV 464
+DFGVA A + ET V++GKP+ RC V
Sbjct: 223 ADFGVARVEALNPKDMTGETGTLGYMAPEVIDGKPYNRRCDV 264
>At1g04430.1 68414.m00434 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 623
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 195 DSGVEYSWRKDGMHFSVGQDTLTTIDAGSLVFSQTKASDEGEYQCFAKSDFGVAS 359
+ G + S+ G HF G D A L FS +DEG + GVAS
Sbjct: 174 EKGEKISFPGGGTHFHYGADKYIASIANMLNFSNDVLNDEGRLRTVLDVGCGVAS 228
>At3g22750.1 68416.m02869 protein kinase, putative similar to
protein kinase ATMRK1 [Arabidopsis thaliana]
gi|2351097|dbj|BAA22079
Length = 378
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 318 EYQCFAK-SDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFELRCPV 464
+YQ K +DFGVA A + ET V++GKP+ RC V
Sbjct: 229 DYQRNLKIADFGVARVEAQNPKDMTGETGTLGYMAPEVLDGKPYNRRCDV 278
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = -2
Query: 313 SSEALVWLNTREPASIVVSVS*PTLKCMPSFRHEYSTPLSSPSVAHSSLVACPSLNNTSA 134
+ E L LN R AS ++S + + SF+ + P S+P+V SL LN SA
Sbjct: 16 NDEMLAALNVRAKASSLLSAAKRSRDDSKSFKKKKPKPASTPTVIRMSL-RTRGLNPDSA 74
Query: 133 G 131
G
Sbjct: 75 G 75
>At1g67025.1 68414.m07621 hypothetical protein
Length = 221
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 70 LFTLRGSPLIPGTRFPFSRRHRPRYCSERDRPRGWSAPQRETTVVSN 210
+ L G L+P +PF ++P YC + + Q T V++N
Sbjct: 5 IIKLEGPRLLPNVTYPFWGVNKPNYCGQTEFQLTCKNNQNLTLVLTN 51
>At4g18600.1 68417.m02755 expressed protein
Length = 1907
Score = 28.3 bits (60), Expect = 3.3
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = -1
Query: 275 SVDSGERVLTDAKMHAVFSPRVFDTTVVSLCGALQPRGLSLSEQYLG--RCLLENGNLVP 102
SVDS A SP V D+T +S+ A+ +SL E+++G CL+E VP
Sbjct: 692 SVDSTHPSCAKAAAETNLSPEVLDSTKLSVAEAVPQEQVSL-EEFVGINPCLVE---AVP 747
Query: 101 GINGLPRSVNNT 66
LP + T
Sbjct: 748 DERLLPEEPDTT 759
>At4g15490.1 68417.m02367 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase ;simalr to
UDP-glucose:sinapate glucosyltransferase GI:9794913 from
[Brassica napus]
Length = 479
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = -2
Query: 316 PSSEALVWLNTREPASIV 263
P+S+ + WL++REP+S+V
Sbjct: 266 PASDCMEWLDSREPSSVV 283
>At3g63260.2 68416.m07109 protein kinase, putative (MRK1) identical
to ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079
Length = 344
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 339 SDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFELRCPV 464
+DFGVA A + ET V+EGKP+ +C V
Sbjct: 250 ADFGVARVEAQNPQDMTGETGTLGYMAPEVLEGKPYNRKCDV 291
>At3g63260.1 68416.m07108 protein kinase, putative (MRK1) identical
to ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079
Length = 391
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 339 SDFGVASTRATKLRRTYIETPAFEEKKVTVVEGKPFELRCPV 464
+DFGVA A + ET V+EGKP+ +C V
Sbjct: 250 ADFGVARVEAQNPQDMTGETGTLGYMAPEVLEGKPYNRKCDV 291
>At3g18770.1 68416.m02382 expressed protein
Length = 625
Score = 28.3 bits (60), Expect = 3.3
Identities = 27/86 (31%), Positives = 31/86 (36%)
Frame = +1
Query: 100 PGTRFPFSRRHRPRYCSERDRPRGWSAPQRETTVVSNTRGEKTACILASVKTRSPLSTLA 279
P R S RP CS ++P G E V S T + LAS T L L
Sbjct: 544 PPLRQDVSESSRPEICSNNNKPAG----AHEIAVASIT---ASGIALASKTTADALEELR 596
Query: 280 LLCSAKPKLRTKASTSASPKATLGSP 357
K L STS T+ SP
Sbjct: 597 SYKEMKNHLLLGQSTSNPSSVTITSP 622
>At5g13520.1 68418.m01561 peptidase M1 family protein similar to
SP|P09960 Leukotriene A-4 hydrolase (EC 3.3.2.6) (LTA-4
hydrolase) {Homo sapiens}; contains Pfam profile
PF01433: Peptidase family M1
Length = 616
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2
Query: 385 VRRSLVALVLATPKSLLAKHWYSPSSEALVWLN 287
+R + V +VL+ SLL + SPS+ AL WL+
Sbjct: 81 IRGTEVVVVLSGQSSLLIVYSTSPSASALQWLS 113
>At4g16880.1 68417.m02548 disease resistance protein-related
contains weak similarity to disease resistance protein
RPP4 [Arabidopsis thaliana] gi|20270890|gb|AAM18462
Length = 230
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 235 CMPSFRHEYSTPLSSPSVAHSSLVACPSLNN 143
C + TPL+S S+ + +L+ CP L N
Sbjct: 125 CKCEVLESFPTPLNSESLEYLNLLRCPKLRN 155
>At4g15500.1 68417.m02368 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 475
Score = 27.9 bits (59), Expect = 4.4
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -2
Query: 316 PSSEALVWLNTREPASIV 263
P S+ + WL++REP+S+V
Sbjct: 262 PDSDCIEWLDSREPSSVV 279
>At3g49830.1 68416.m05448 DNA helicase-related similar to DNA
helicase GI:4521249 from [Mus musculus]
Length = 473
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 228 GMHFSVGQDTLTTIDAGSLVFSQTKASDEGEYQCFAKS 341
G+ S+GQ+T T+ AGS +FS + E Q F K+
Sbjct: 85 GIAKSLGQETPFTMIAGSEIFSLEMSKTEALTQAFRKA 122
>At1g70180.2 68414.m08076 sterile alpha motif (SAM)
domain-containing protein contains Pfam profile PF00536:
SAM domain (Sterile alpha motif)
Length = 460
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 115 PFSRRHRPRYCSERDRPRGWSAPQRETTVVSNTRGEKTACILASVKTRSP 264
P S RPR RDRP S R ++ + ++ A L ++ RSP
Sbjct: 118 PRSLDTRPRMAEPRDRPLSSSRTARGSSQMISSSSSHPAWALEDLRRRSP 167
>At1g70180.1 68414.m08075 sterile alpha motif (SAM)
domain-containing protein contains Pfam profile PF00536:
SAM domain (Sterile alpha motif)
Length = 456
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 115 PFSRRHRPRYCSERDRPRGWSAPQRETTVVSNTRGEKTACILASVKTRSP 264
P S RPR RDRP S R ++ + ++ A L ++ RSP
Sbjct: 118 PRSLDTRPRMAEPRDRPLSSSRTARGSSQMISSSSSHPAWALEDLRRRSP 167
>At5g41830.1 68418.m05093 F-box family protein-related contains a
novel domain similar to F-box that is shared among other
proteins in Arabidopsis; similar to proteins At3g54160,
At1g47920 (syntaxin SYP81), At3g44180, At1g56610,
At3g58890, At1g48390, At3g59270 [Arabidopsis thaliana]
Length = 463
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 301 LVWLNTREPASIVVSVS*PTLKCMPSFRHE 212
L+W + EP V+VS PTLK + R E
Sbjct: 162 LIWEESSEPEPCYVTVSVPTLKILKFSRFE 191
>At1g10390.1 68414.m01171 nucleoporin family protein contains Pfam
profiles: PF04096 nucleoporin autopeptidase, PF03093
nucleoporin FG repeat family
Length = 1041
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 211 YSTPLSSPSVAHSSLVACPSLNNTSAGASLRTGTLSPELTGCP 83
+STP S+P +S+ + P+ NTS G+S G + G P
Sbjct: 116 FSTPQSNP-FGNSTQQSQPAFGNTSFGSSTPFGATNTPAFGAP 157
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +3
Query: 240 SVGQDTLTTIDAGSLVFSQTKASDEGEYQCFAKSDFGVASTRATKLRRTYIETPAFE 410
S+ ++ TI+ +L Q K + EY KS + STR K YIE + E
Sbjct: 108 SIESESDITIEESALCLLQMKDDNMSEYLQNLKSIDSLVSTRKRKDTENYIEIDSDE 164
>At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapiens,
PIR:S53363
Length = 438
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 148 SERDRPRGWSAPQRETTVVSNTRGEKTACILASVKTRSPLS--TLALLCSAKPKLRTKAS 321
S R P S P R +T S T KTA ++ +P + +A S++ +R+ +
Sbjct: 162 SSRKTPSPTSTPSRISTTTSTTPSFKTAGDAQRSRSLTPRAKPQIAANASSRTNVRSSSV 221
Query: 322 TSASPKAT 345
TS ++T
Sbjct: 222 TSRPDRST 229
>At1g66940.2 68414.m07609 protein kinase-related
Length = 309
Score = 27.1 bits (57), Expect = 7.7
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -1
Query: 275 SVDSGERVLTDAKMHAVFSPRVFDTTVVSLCGALQPRGLSLSEQYLGRCLLENGNLVPGI 96
S D+ E+ L + +V + F+ TVV Q LS LGRC + N NL PG+
Sbjct: 176 SFDTKEKELNVTNLESVLR-KGFEVTVVINENTCQE---CLSS--LGRCHVFNENLTPGV 229
Query: 95 NGLPRS-VNNTCSQN 54
P S +C N
Sbjct: 230 KCRPPSDSEGSCGYN 244
>At1g66940.1 68414.m07608 protein kinase-related
Length = 332
Score = 27.1 bits (57), Expect = 7.7
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -1
Query: 275 SVDSGERVLTDAKMHAVFSPRVFDTTVVSLCGALQPRGLSLSEQYLGRCLLENGNLVPGI 96
S D+ E+ L + +V + F+ TVV Q LS LGRC + N NL PG+
Sbjct: 176 SFDTKEKELNVTNLESVLR-KGFEVTVVINENTCQE---CLSS--LGRCHVFNENLTPGV 229
Query: 95 NGLPRS-VNNTCSQN 54
P S +C N
Sbjct: 230 KCRPPSDSEGSCGYN 244
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,264,512
Number of Sequences: 28952
Number of extensions: 271313
Number of successful extensions: 978
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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