Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304G08f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4DCW3 Cluster: Amino acid transporter, putative; n=2; ...    33   5.2  
UniRef50_A0CSZ4 Cluster: Chromosome undetermined scaffold_263, w...    32   6.9  

>UniRef50_Q4DCW3 Cluster: Amino acid transporter, putative; n=2;
           Trypanosoma cruzi|Rep: Amino acid transporter, putative
           - Trypanosoma cruzi
          Length = 538

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 55  ESIIKANHRTGKYYIFTRHSMRGPRCNLIRNK**IYVCIHFTYCAFG 195
           E+ ++  H     +++ RH++ G RC LIR +  IY+C+       G
Sbjct: 482 ENSVEEPHEPRVTWVYWRHNLFGRRCTLIRLRVYIYLCLGIVIMVVG 528


>UniRef50_A0CSZ4 Cluster: Chromosome undetermined scaffold_263,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_263,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 978

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = -2

Query: 508 NKKNVTFISVFVTLLTFISKIVNRFIIILYFNEFHSV*AKNELSIIYSHDSILTI 344
           N   + FI +F+T   FI   +N FII+ +FN       KN   II+ H SI  +
Sbjct: 636 NNIQIPFIFIFIT---FILYGIN-FIILQFFNAIKQFRQKNHSQIIHKHFSIFNL 686


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,262,074
Number of Sequences: 1657284
Number of extensions: 7448035
Number of successful extensions: 10692
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10684
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)