Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304G08f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68105-4|CAA92120.2|  304|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug resis...    28   4.7  
U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resis...    28   4.7  
U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug resis...    28   4.7  
U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug resis...    28   4.7  
U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug resis...    28   4.7  
AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug res...    28   4.7  
U55365-8|AAA98573.2|  383|Caenorhabditis elegans Hypothetical pr...    27   6.2  

>Z68105-4|CAA92120.2|  304|Caenorhabditis elegans Hypothetical
           protein F13E6.5 protein.
          Length = 304

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 251 EYYDCRLGPLRMNTFNLCKPNAQ*VKC 171
           E+  C +G LR + F++CKP+   V C
Sbjct: 144 EFLKCYVGRLRPHFFSVCKPDWSKVDC 170


>U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug
           resistance related protein1 protein.
          Length = 1540

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 514 IKNKKNVTFISVFVTLLTFISKIVNRFIIILYFNE 410
           I++K    +I V + LL F+S ++   I+  YF+E
Sbjct: 326 IEDKNQPMWIGVSIALLMFLSSLLQSMILHQYFHE 360


>U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug
           resistance protein familyprotein 1, isoform e protein.
          Length = 1534

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 514 IKNKKNVTFISVFVTLLTFISKIVNRFIIILYFNE 410
           I++K    +I V + LL F+S ++   I+  YF+E
Sbjct: 326 IEDKNQPMWIGVSIALLMFLSSLLQSMILHQYFHE 360


>U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug
           resistance protein familyprotein 1, isoform c protein.
          Length = 1534

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 514 IKNKKNVTFISVFVTLLTFISKIVNRFIIILYFNE 410
           I++K    +I V + LL F+S ++   I+  YF+E
Sbjct: 326 IEDKNQPMWIGVSIALLMFLSSLLQSMILHQYFHE 360


>U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug
           resistance protein familyprotein 1, isoform b protein.
          Length = 1534

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 514 IKNKKNVTFISVFVTLLTFISKIVNRFIIILYFNE 410
           I++K    +I V + LL F+S ++   I+  YF+E
Sbjct: 326 IEDKNQPMWIGVSIALLMFLSSLLQSMILHQYFHE 360


>U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug
           resistance protein familyprotein 1, isoform a protein.
          Length = 1528

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 514 IKNKKNVTFISVFVTLLTFISKIVNRFIIILYFNE 410
           I++K    +I V + LL F+S ++   I+  YF+E
Sbjct: 326 IEDKNQPMWIGVSIALLMFLSSLLQSMILHQYFHE 360


>AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug
           resistance-associatedprotein protein.
          Length = 1534

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 514 IKNKKNVTFISVFVTLLTFISKIVNRFIIILYFNE 410
           I++K    +I V + LL F+S ++   I+  YF+E
Sbjct: 326 IEDKNQPMWIGVSIALLMFLSSLLQSMILHQYFHE 360


>U55365-8|AAA98573.2|  383|Caenorhabditis elegans Hypothetical
           protein C12D5.2 protein.
          Length = 383

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 278 KVS*IINDCEYYDCRLGPLRMNTFN 204
           K+  +IN+  Y DC+L   R++ +N
Sbjct: 113 KIKDVINELTYLDCKLEQFRLSAYN 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,916,706
Number of Sequences: 27780
Number of extensions: 188748
Number of successful extensions: 307
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)