Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304G07f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g29990.1 68414.m03668 prefoldin, putative similar to Swiss-Pr... 94 6e-20
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 36 0.012
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 34 0.050
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 34 0.050
At5g07820.1 68418.m00896 expressed protein 34 0.067
At3g22480.2 68416.m02842 prefoldin-related KE2 family protein si... 33 0.12
At3g22480.1 68416.m02841 prefoldin-related KE2 family protein si... 33 0.12
At2g33793.1 68415.m04145 expressed protein 32 0.20
At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyo... 32 0.27
At1g68910.1 68414.m07886 expressed protein similar to Myosin hea... 32 0.27
At4g19700.1 68417.m02893 expressed protein 31 0.62
At5g27220.1 68418.m03247 protein transport protein-related low s... 30 0.82
At4g03153.1 68417.m00429 kinase interacting family protein simil... 30 0.82
At3g52115.1 68416.m05720 hypothetical protein 30 0.82
At3g11450.1 68416.m01396 DNAJ heat shock N-terminal domain-conta... 30 0.82
At5g52280.1 68418.m06488 protein transport protein-related low s... 30 1.1
At4g25070.1 68417.m03596 expressed protein ; expression supporte... 30 1.1
At3g51090.1 68416.m05594 expressed protein 30 1.1
At5g67050.1 68418.m08453 lipase class 3 family protein similar t... 29 1.4
At5g61920.1 68418.m07773 hypothetical protein 29 1.4
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 29 1.4
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 29 1.9
At4g10710.1 68417.m01751 transcriptional regulator-related simil... 29 1.9
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 29 1.9
At2g25350.1 68415.m03032 phox (PX) domain-containing protein wea... 29 1.9
At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM TIGR01... 29 1.9
At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zi... 29 2.5
At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zi... 29 2.5
At3g22790.1 68416.m02873 kinase interacting family protein simil... 29 2.5
At1g04650.1 68414.m00462 hypothetical protein 29 2.5
At5g42060.1 68418.m05120 expressed protein 28 4.4
At5g27330.1 68418.m03263 expressed protein 28 4.4
At4g17210.1 68417.m02588 myosin heavy chain-related contains wea... 28 4.4
At4g34550.1 68417.m04909 expressed protein 27 5.8
At3g09370.1 68416.m01111 myb family transcription factor (MYB3R3... 27 5.8
At2g38370.1 68415.m04714 expressed protein 27 5.8
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 27 5.8
At1g16520.1 68414.m01977 expressed protein 27 5.8
At5g10250.1 68418.m01190 phototropic-responsive protein, putativ... 27 7.7
At3g11950.1 68416.m01473 UbiA prenyltransferase family protein c... 27 7.7
At1g51540.1 68414.m05801 kelch repeat-containing protein contain... 27 7.7
At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof... 27 7.7
>At1g29990.1 68414.m03668 prefoldin, putative similar to
Swiss-Prot:O15212 prefoldin subunit 6 (Protein Ke2)
[Homo sapiens]
Length = 129
Score = 93.9 bits (223), Expect = 6e-20
Identities = 49/94 (52%), Positives = 64/94 (68%)
Frame = +3
Query: 138 VQKDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSK 317
+QKDI K +++ QL EN+ V +EL LL +D+ VYKLIGPVLVKQDL EA NV K
Sbjct: 23 IQKDIGKNHQLRKKYTIQLGENELVLKELDLLEEDANVYKLIGPVLVKQDLAEANANVRK 82
Query: 318 RMEYISKEIKRTDDHICALENKQEALQENLNKLR 419
R+EYIS E+KR D + +E KQ +E + KL+
Sbjct: 83 RIEYISAELKRLDAILQDMEEKQNNKRETIMKLQ 116
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 36.3 bits (80), Expect = 0.012
Identities = 30/104 (28%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Frame = +3
Query: 138 VQKDIKKAVTQKQQLDS-QLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVS 314
V DIK + Q+ S ++++ ++V ++KL +D++ K DL+ A Q++
Sbjct: 928 VLTDIKLQLRDTQETKSKEISDLQSVLTDIKLQLRDTQETKS----KEISDLQSALQDMQ 983
Query: 315 KRMEYISKEIKRTDDHICALENKQEALQENLNKLRNDIGKLKLK 446
+E +SK ++ T+D A EN+Q L+E+++ L+N I + + K
Sbjct: 984 LEIEELSKGLEMTND--LAAENEQ--LKESVSSLQNKIDESERK 1023
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 34.3 bits (75), Expect = 0.050
Identities = 19/81 (23%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 168 QKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLV-KQDLEEARQNVSKRMEYISKEI 344
Q Q L ++ E K +EE+ L+ + YK+ L+ K+D+E A S++++ + + +
Sbjct: 406 QTQILSTKDAELKGAREEINRLQSEFSSYKIRAHALLQKKDMELAAAKDSEQIKSLEEAL 465
Query: 345 KRTDDHICALENKQEALQENL 407
K + + + +++ Q++L
Sbjct: 466 KEAEKEVYLVSAERDRAQQDL 486
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 34.3 bits (75), Expect = 0.050
Identities = 19/81 (23%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 168 QKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLV-KQDLEEARQNVSKRMEYISKEI 344
Q Q L ++ E K +EE+ L+ + YK+ L+ K+D+E A S++++ + + +
Sbjct: 406 QTQILSTKDAELKGAREEINRLQSEFSSYKIRAHALLQKKDMELAAAKDSEQIKSLEEAL 465
Query: 345 KRTDDHICALENKQEALQENL 407
K + + + +++ Q++L
Sbjct: 466 KEAEKEVYLVSAERDRAQQDL 486
>At5g07820.1 68418.m00896 expressed protein
Length = 561
Score = 33.9 bits (74), Expect = 0.067
Identities = 26/94 (27%), Positives = 49/94 (52%)
Frame = +3
Query: 186 SQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYISKEIKRTDDHI 365
S++++NK+ KE+L K+ E K++ PV LE+ V K++ IS+ +D
Sbjct: 185 SRISQNKSPKEDLSKNLKNKEKGKIVEPVRCDDVLEKTDLEV-KKVSRISENKSSKED-- 241
Query: 366 CALENKQEALQENLNKLRNDIGKLKLKA*KMCEL 467
L+NK++A + + + + K L A K+ +
Sbjct: 242 -TLKNKEKAKIDEPVRCDDVLEKTSLDAQKVSRI 274
>At3g22480.2 68416.m02842 prefoldin-related KE2 family protein
similar to Swiss-Prot:Q9UHV9 prefoldin subunit 2
(Protein HSPC231) [Homo sapiens]; contains Pfam domain,
PF01920: KE2 family protein
Length = 148
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/89 (20%), Positives = 48/89 (53%)
Frame = +3
Query: 135 GVQKDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVS 314
G + ++ + + L+ Q++E+ V ++ L + + +++IG VLV++ ++E V
Sbjct: 25 GKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQSRKCFRMIGGVLVERTIKEVLPAVQ 84
Query: 315 KRMEYISKEIKRTDDHICALENKQEALQE 401
+ + + + +++ + LE K++ L E
Sbjct: 85 RNKDGLEEVVRKLYE---TLEKKKKDLTE 110
>At3g22480.1 68416.m02841 prefoldin-related KE2 family protein
similar to Swiss-Prot:Q9UHV9 prefoldin subunit 2
(Protein HSPC231) [Homo sapiens]; contains Pfam domain,
PF01920: KE2 family protein
Length = 148
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/89 (20%), Positives = 48/89 (53%)
Frame = +3
Query: 135 GVQKDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVS 314
G + ++ + + L+ Q++E+ V ++ L + + +++IG VLV++ ++E V
Sbjct: 25 GKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQSRKCFRMIGGVLVERTIKEVLPAVQ 84
Query: 315 KRMEYISKEIKRTDDHICALENKQEALQE 401
+ + + + +++ + LE K++ L E
Sbjct: 85 RNKDGLEEVVRKLYE---TLEKKKKDLTE 110
>At2g33793.1 68415.m04145 expressed protein
Length = 212
Score = 32.3 bits (70), Expect = 0.20
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +3
Query: 138 VQKDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSK 317
V D K ++ QQ + +E+ K+E + +EV I + K LE+ RQN SK
Sbjct: 36 VSSDFKGIMSALQQFREKAHEDGRKKKEESISSVSTEVKSKIDEL--KSKLEKERQNFSK 93
Query: 318 RMEYISKE 341
+ SKE
Sbjct: 94 ALSKSSKE 101
>At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyosin
1 [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae};
similar to enterophilin-2L (GI:12718845) [Cavia
porcellus]; similar to latent nuclear antigen
(GI:5669894) [Human herpesvirus 8]; similar to multiple
ligand-binding protein 1 (GI:1403575) [Streptococcus
sp.]
Length = 326
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/83 (20%), Positives = 45/83 (54%)
Frame = +3
Query: 180 LDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYISKEIKRTDD 359
LD + E++ K + +L K+ ++ L + DLE+ R ++S+ E + ++K+TD
Sbjct: 139 LDEKAKESEKTKND-ELASKEDQINVLKARLY---DLEKERVSLSEENETLKDQLKKTDT 194
Query: 360 HICALENKQEALQENLNKLRNDI 428
+ + K++ + ++++ ++
Sbjct: 195 EMSCAKAKEDEIASKVSQIGEEL 217
>At1g68910.1 68414.m07886 expressed protein similar to Myosin heavy
chain, nonmuscle type B (Cellular myosin heavy chain,
type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B)
(Swiss-Prot:Q27991) [Bos taurus]; contains 1
transmembrane domain
Length = 627
Score = 31.9 bits (69), Expect = 0.27
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Frame = +3
Query: 138 VQKDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSK 317
VQ + K + QK L+ ++EN + E+ LR E K L DLE N SK
Sbjct: 284 VQLEAKDLLVQK--LEGTISENSEIVSEVLTLR---EYVKSAEQKLKNTDLELKSVNASK 338
Query: 318 RMEYISKEIKRTDDHICALENKQEALQENL--NKLRNDIGKLKLK 446
+ + H+ +EN E+++ENL + R + G+ K+K
Sbjct: 339 QEILV---------HLAEMENANESVKENLFEAESRAESGEAKIK 374
>At4g19700.1 68417.m02893 expressed protein
Length = 304
Score = 30.7 bits (66), Expect = 0.62
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Frame = +3
Query: 234 RKDSEVYKLIGPVLVKQDLE-EARQNVSKRM------EYISKEIKRTDDHICALENKQEA 392
++ SE+ + + K +E EARQ RM I+K++K DD I + N
Sbjct: 118 QQQSEIDRFVAQQTEKLRIEIEARQQTQTRMLASAVQNVIAKKLKEKDDEIVRIRNLNWV 177
Query: 393 LQENLNKL 416
LQE + L
Sbjct: 178 LQERVKSL 185
>At5g27220.1 68418.m03247 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1181
Score = 30.3 bits (65), Expect = 0.82
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 243 SEVYKLIGPVLVKQDL--EEARQNVSKRMEYISKEIKRTDDHICALENKQEALQENLNKL 416
SE+ +L+ V DL EE RQ V+ +E E+K +H+ +N + L+E + +
Sbjct: 133 SEIVELLRKSQVDLDLKGEELRQMVT-HLERYRVEVKEEKEHLRRTDNGRRELEEEIERK 191
Query: 417 RNDI 428
D+
Sbjct: 192 TKDL 195
Score = 27.1 bits (57), Expect = 7.7
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 213 KEELKLLRKDSEVYKLIGPVLVKQD--LEEARQNVSKRMEYISKEIKRTDDHICALENKQ 386
+ L+L++ EV +L G L + D LE R V+ ME++ K R+ + +E K+
Sbjct: 288 RRSLELIKTQGEV-ELKGKQLEQMDIDLERHRGEVNVVMEHLEKSQTRSRELAEEIERKR 346
Query: 387 EALQENLNK 413
+ L L+K
Sbjct: 347 KELTAVLDK 355
>At4g03153.1 68417.m00429 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 215
Score = 30.3 bits (65), Expect = 0.82
Identities = 13/34 (38%), Positives = 25/34 (73%)
Frame = +3
Query: 156 KAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYK 257
+A T+K Q+ + ++ +KEEL++LR+++ VYK
Sbjct: 119 EAETEKDQIVEFDDGDETMKEELEILREENRVYK 152
>At3g52115.1 68416.m05720 hypothetical protein
Length = 588
Score = 30.3 bits (65), Expect = 0.82
Identities = 11/46 (23%), Positives = 28/46 (60%)
Frame = +3
Query: 303 QNVSKRMEYISKEIKRTDDHICALENKQEALQENLNKLRNDIGKLK 440
+N+ K++EY+S E + + ++E +++ L+ L ++G+L+
Sbjct: 188 ENLLKKLEYLSTEAADGERKLSSVEEEKQRLKTRLQVFEENVGRLE 233
>At3g11450.1 68416.m01396 DNAJ heat shock N-terminal
domain-containing protein / cell division
protein-related similar to GlsA [Volvox carteri f.
nagariensis] GI:4633129; contains Pfam profiles PF00226
DnaJ domain, PF00249 Myb-like DNA-binding domain
Length = 663
Score = 30.3 bits (65), Expect = 0.82
Identities = 23/105 (21%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Frame = +3
Query: 153 KKAVTQKQQLDSQLNENKAVKEELKLLRKD-SEVYKLIGPVLVKQDLEEARQNVSKR-ME 326
+K +K+ +S + K + E KLLRK+ + + L P++ ++ L+ + +++ M
Sbjct: 353 RKEEEEKRAAESAQQQKKTKEREKKLLRKERNRLRTLSAPLVAQRLLDISEEDIENLCMS 412
Query: 327 YISKEIKRTDDHICALENKQ--EALQENLNKLRNDIGKLKLKA*K 455
+++++ D + E + + +++ N RND + K K K
Sbjct: 413 LNTEQLQNLCDKMGNKEGLELAKVIKDGCNSSRNDEAESKEKVSK 457
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = +3
Query: 210 VKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYISKEIKRTDDHICALENKQE 389
+K EL+ LR+ SE+ +L L KQ ++E SKR++ +SKE+ L+ +++
Sbjct: 269 LKMELEALRRQSELSELEKQSLRKQAIKE-----SKRIQELSKEVS-------CLKGERD 316
Query: 390 ALQENLNKLR 419
E KLR
Sbjct: 317 GAMEECEKLR 326
>At4g25070.1 68417.m03596 expressed protein ; expression supported
by MPSS
Length = 765
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +3
Query: 141 QKDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQ--DLEEARQNVS 314
Q+D ++A + +LD EN + ++L+ + E + L KQ L E
Sbjct: 397 QEDDREASALRDELDMLQEENDNIMDKLQRAEERREAAEARAKELEKQVASLGEGANFDV 456
Query: 315 KRMEYISKEIKRTDDHICALENKQEALQENLNKLRNDIGKLKLKA*KMCE 464
K ++ +++ + + A E K++ N L ++ LK +A K E
Sbjct: 457 KLLKRKEAALRQREAALRAAEQKRDGRNRETNALSSEFQSLKDEAEKSTE 506
>At3g51090.1 68416.m05594 expressed protein
Length = 298
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 270 VLVKQDLEEARQNVSKRMEYISKEIKRT-DDHICALENKQEALQENLNKLRNDI 428
V+ K ++++A + EI + D H L+++ E L+ ++ ++R+DI
Sbjct: 164 VVSKGEMQKAEMTQESNLSKFKSEINSSLDHHFSLLQHENEKLRNDIERIRSDI 217
>At5g67050.1 68418.m08453 lipase class 3 family protein similar to
lipase precursor [Rhizopus arrhizus] GI:6942320;
contains Pfam profile PF01764: Lipase
Length = 477
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 230 LKKRFRGIQTH-RTRIGEARFGRSQTKRLQTYGV 328
L +R +G+ T+ + R+G+++FG K+L+ Y +
Sbjct: 315 LLERIQGVYTYGQPRVGDSKFGEFMEKKLEKYNI 348
>At5g61920.1 68418.m07773 hypothetical protein
Length = 238
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 144 KDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYK 257
KD+KK + + L++ E + +KEE + LRK+ E K
Sbjct: 160 KDLKKVCLEAESLEASSQELERLKEEHQRLRKEFEEEK 197
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 29.5 bits (63), Expect = 1.4
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +3
Query: 171 KQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQN---VSKRMEYISKE 341
K QLD L+ K + +E + LR D+E V +K D+E + +SK+ + + E
Sbjct: 867 KLQLD--LDVQKIILDEERTLRGDTEAQA----VRLKFDIEVLKDQLLLISKQQKNVYSE 920
Query: 342 IKRTDDHICALENKQEALQENLNKLR 419
+ T + ALE++ L + +LR
Sbjct: 921 LGETKSAVAALESQNIILIQEAVELR 946
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/86 (20%), Positives = 43/86 (50%)
Frame = +3
Query: 171 KQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYISKEIKR 350
+ ++D ++ + K+ + +KD E+ K V + +EE ++ K M + +KR
Sbjct: 521 RHEIDVLVSAVEQTKKHFESSKKDWEM-KEANLVNYVKKMEEDVASMGKEMNRLDNLLKR 579
Query: 351 TDDHICALENKQEALQENLNKLRNDI 428
T++ A K+ +++L ++ +I
Sbjct: 580 TEEEADAAWKKEAQTKDSLKEVEEEI 605
>At4g10710.1 68417.m01751 transcriptional regulator-related similar
to chromatin-specific transcription elongation factor
FACT 140 kDa subunit (GI:5499741) [Homo sapiens]
Length = 1074
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +3
Query: 225 KLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRME----YISKEIKRTDDHICALENKQEA 392
+LL K S+ K + K+D EE + R YI+K R+DDH+ + E ++
Sbjct: 444 ELLTKCSKSVKDVA-YSFKEDEEEEKPRKKARTSGSENYITKTALRSDDHVVSKEELRKQ 502
Query: 393 LQENLNKLRND 425
Q L + +N+
Sbjct: 503 HQAELARQKNE 513
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 29.1 bits (62), Expect = 1.9
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Frame = +3
Query: 180 LDSQLNENKAVKEELKL----LRKDSEVYKLIGPVLVK--QDLEEARQNVSKRMEYISKE 341
LDSQL + +KEE + LR + EV + ++ ++LEE Q + R + ++
Sbjct: 374 LDSQLQDYFRLKEEAGMKTIKLRDEHEVLERQRRTDLEALRNLEENYQQLINRKNDLDEQ 433
Query: 342 IKRTDDHICALENKQEALQENLNKLRNDIGKLKLK 446
IKR D +E + L+ ++ L+ K
Sbjct: 434 IKRFKDRQGEIETSSSKYKNETTSLKTELRALQEK 468
>At2g25350.1 68415.m03032 phox (PX) domain-containing protein weak
similarity to SP|Q9UTK5 Abnormal long morphology protein
1 (Sp8) {Schizosaccharomyces pombe}; contains Pfam
profile PF00787: PX domain
Length = 643
Score = 29.1 bits (62), Expect = 1.9
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Frame = +3
Query: 165 TQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEA----RQNVSKRMEYI 332
T + L ++LN+ AVKE L D EV K++LE+A RQ+V+K M++
Sbjct: 397 TDMEDLIARLNQETAVKEYLNRKVDDLEVELETTKQRNKENLEQALMTERQSVTK-MQWD 455
Query: 333 SKEIK-RTDDHICALENKQEALQEN 404
+E++ +T + L++K++ ++
Sbjct: 456 MEELRQKTFEMELKLKSKEDGSSDS 480
>At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; contains TIGRFAM TIGR00864:
polycystin cation channel protein; similar to
fimbriae-associated protein Fap1 [Streptococcus
parasanguinis] (GI:3929312)
Length = 1498
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +3
Query: 276 VKQDLEEARQNVSKRMEYISKEIKRTDDHICALENKQEALQENLNKLRNDIGK 434
+KQ L++ R+ +S M E+K+ D E + + L++ L+ LRND+ K
Sbjct: 937 IKQ-LKQLREQISSSMG-TKDEVKQALDEKEKTEERLKVLRKELDALRNDLSK 987
>At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 28.7 bits (61), Expect = 2.5
Identities = 27/109 (24%), Positives = 54/109 (49%)
Frame = +3
Query: 147 DIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRME 326
++ + +KQ+L Q N + V+E+ K +++ E+ + L Q +EE +N K
Sbjct: 255 ELTEEEARKQELLVQ-NLRQLVEEKKKDMKEIEELCSVKSEEL-NQLMEEKEKNQQKHYR 312
Query: 327 YISKEIKRTDDHICALENKQEALQENLNKLRNDIGKLKLKA*KMCELKV 473
++ +RT HI + + E L+ L R KL++K ++ + +V
Sbjct: 313 ELNAIQERTMSHIQKIVDDHEKLKRLLESERK---KLEIKCNELAKREV 358
>At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 28.7 bits (61), Expect = 2.5
Identities = 27/109 (24%), Positives = 54/109 (49%)
Frame = +3
Query: 147 DIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRME 326
++ + +KQ+L Q N + V+E+ K +++ E+ + L Q +EE +N K
Sbjct: 255 ELTEEEARKQELLVQ-NLRQLVEEKKKDMKEIEELCSVKSEEL-NQLMEEKEKNQQKHYR 312
Query: 327 YISKEIKRTDDHICALENKQEALQENLNKLRNDIGKLKLKA*KMCELKV 473
++ +RT HI + + E L+ L R KL++K ++ + +V
Sbjct: 313 ELNAIQERTMSHIQKIVDDHEKLKRLLESERK---KLEIKCNELAKREV 358
>At3g22790.1 68416.m02873 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/72 (20%), Positives = 35/72 (48%)
Frame = +3
Query: 195 NENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYISKEIKRTDDHICAL 374
N+N + + ++ +++ ++ +K+ LEE + +EI+R D I +L
Sbjct: 498 NQNLSELNDSSMIFLETQKCEISSLKEIKEKLEEEVARHINQSSAFQEEIRRLKDEIDSL 557
Query: 375 ENKQEALQENLN 410
+ +A+ E +N
Sbjct: 558 NKRYQAIMEQVN 569
>At1g04650.1 68414.m00462 hypothetical protein
Length = 936
Score = 28.7 bits (61), Expect = 2.5
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +3
Query: 213 KEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYISKEIKRTDDHICA----LEN 380
+EEL+LL K+ K Q L E R S +E + ++ + IC L+N
Sbjct: 834 EEELELLSKEGTEVKA-----TVQKLLEGRSQRSMEVEKRPNKKRKLPEGICRGMELLQN 888
Query: 381 KQEALQENLNKLRND 425
+ + E LN+LR+D
Sbjct: 889 GVKRINEGLNELRSD 903
>At5g42060.1 68418.m05120 expressed protein
Length = 92
Score = 27.9 bits (59), Expect = 4.4
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Frame = +3
Query: 138 VQKDIKKAV--TQKQQLDS----QLNENKAVKE-ELKL-LRKDSEVYKLIGPVLVKQDLE 293
+ KD+++ + T K+ L+S ++ E KA +E LKL L + YK+I V+ LE
Sbjct: 11 IDKDLRRKIKKTVKKILESSNLYKITEIKAREEASLKLDLDLSQDPYKVIVKEEVENFLE 70
Query: 294 EARQNVSKRMEYISKEIKRT 353
EA + + ++ + K I+ T
Sbjct: 71 EAVKLIGNKLAMLPKRIEST 90
>At5g27330.1 68418.m03263 expressed protein
Length = 628
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +3
Query: 288 LEEARQNVSKRMEYISKEIKRTDDHICALENKQEALQENLNKLRNDIGKL 437
+E R N K ++ + + + + ALE EA + L K++ + G+L
Sbjct: 436 VEVERDNAGKALDEEKRNMVALKEKVVALEKTNEATGKELEKIKAERGRL 485
>At4g17210.1 68417.m02588 myosin heavy chain-related contains weak
similarity to Swiss-Prot:P14105 myosin heavy chain,
nonmuscle (Cellular myosin heavy chain) (NMMHC) [Gallus
gallus]
Length = 527
Score = 27.9 bits (59), Expect = 4.4
Identities = 22/99 (22%), Positives = 46/99 (46%)
Frame = +3
Query: 144 KDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRM 323
KD+ + + + +LN + A K+E + K+ + + V + LE A+Q +
Sbjct: 206 KDMSHDIAEMRDAAERLNSDAARKKEEEEQIKEESI--ALRETYVCKKLE-AKQRLEDLK 262
Query: 324 EYISKEIKRTDDHICALENKQEALQENLNKLRNDIGKLK 440
E+K+ + + + + E LQE + KL ++ + K
Sbjct: 263 RDCDPELKKDIEELMEISTENERLQEEI-KLSGELKEAK 300
>At4g34550.1 68417.m04909 expressed protein
Length = 279
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +3
Query: 135 GVQKDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVS 314
G +++ TQ + ++ LN N + E K + DSE +K + + R N +
Sbjct: 96 GEEEEASSQATQSKNVEHFLNNNTNLLRECKRIWSDSETNSRSQVKRLKTNAADNRGNET 155
Query: 315 KRM 323
K M
Sbjct: 156 KNM 158
>At3g09370.1 68416.m01111 myb family transcription factor (MYB3R3)
contains Pfam profile: Myb DNA-binding proteins;
identical to cDNA putative c-myb-like transcription
factor (MYB3R3) GI:15375285
Length = 505
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/68 (23%), Positives = 34/68 (50%)
Frame = +3
Query: 156 KAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYIS 335
K + +++D ++N+ K E + S Y L P ++ + S+++E+IS
Sbjct: 424 KKTDEAKEVDQKVNDGKDSSE---IQNNGSNAYNLSPPYRIRSKRTAVFK--SRQLEFIS 478
Query: 336 KEIKRTDD 359
+E ++ DD
Sbjct: 479 REEEKADD 486
>At2g38370.1 68415.m04714 expressed protein
Length = 522
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/110 (18%), Positives = 53/110 (48%)
Frame = +3
Query: 153 KKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYI 332
++ + ++++ L E +A K + L++ +E Y+ + L E + K +
Sbjct: 80 RELIVKERETLEVLKELEATKATVLKLQQRNEAYE-------EDTLREEVDSHIKPAGVV 132
Query: 333 SKEIKRTDDHICALENKQEALQENLNKLRNDIGKLKLKA*KMCELKVKHF 482
K++ + ++C + + +E++++ NKL + L+ ++ E +K F
Sbjct: 133 LKDLSQAKMNLCKIASIRESVEQLKNKLNEERAALEKTRERLMEKSLKVF 182
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 27.5 bits (58), Expect = 5.8
Identities = 22/95 (23%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +3
Query: 147 DIKKAVTQKQQLDSQLN-ENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRM 323
D++KA+ +++ + L+ E+K + + +++ + KL KQ E + +SK M
Sbjct: 262 DVQKALLEQEAAYNTLSQEHKQINGLFE--EREATIKKLTDDY--KQAREMLEEYMSK-M 316
Query: 324 EYISKEIKRTDDHICALENKQEALQENLNKLRNDI 428
E + ++ T + + E+ L+E + LRN++
Sbjct: 317 EETERRMQETGKDVASRESAIVDLEETVESLRNEV 351
>At1g16520.1 68414.m01977 expressed protein
Length = 325
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +3
Query: 240 DSEVY----KLIGPVLVKQDLEEARQNVSKRMEYISKEIKRTDDHICALENKQEALQENL 407
DSEV KL+G V ++LEE + + +K + L ++++L +
Sbjct: 45 DSEVVELRQKLLGKESVVRELEEKASRLERDCREADSRLKVVLEDNMNLTKEKDSLAMTV 104
Query: 408 NKLRNDIGKLK 440
KL D+ KL+
Sbjct: 105 TKLTRDLAKLE 115
>At5g10250.1 68418.m01190 phototropic-responsive protein, putative
similar to root phototropism RPT2 [Arabidopsis thaliana]
gi|6959488|gb|AAF33112, a signal transducer of
phototropic response PMID:10662859
Length = 607
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/83 (22%), Positives = 40/83 (48%)
Frame = +3
Query: 144 KDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRM 323
+ +K + + +L + EN +E+ K + +D+E+ K + K++LE NV K+M
Sbjct: 488 EQVKMRMMMQDKLPEKEEENSGGRED-KRMSRDNEIIKTL-----KEELE----NVKKKM 537
Query: 324 EYISKEIKRTDDHICALENKQEA 392
+ + L +KQ++
Sbjct: 538 SELQSDYNELQQEYERLSSKQKS 560
>At3g11950.1 68416.m01473 UbiA prenyltransferase family protein
contains Pfam profile PF01040: UbiA prenyltransferase
family
Length = 954
Score = 27.1 bits (57), Expect = 7.7
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Frame = +3
Query: 147 DIKKAVTQKQQLDSQLNENKAVKEELKLLRK-DSEVYKL-IGPVLVKQDLEEARQNVSKR 320
D+K Q QQL ++L+E + + L+++ D ++ L I P +V + +N K+
Sbjct: 294 DLKPRAEQIQQLSTRLSEARNARSLTNLVKEIDGKLGPLEIKPKIVTDSESDKPENTEKK 353
Query: 321 M--EYISKEIKRTDD--HICALENKQEALQENLNKLRNDIGKLKLKA*KMCELKV 473
E KE T + + + +EA ++ L D +K A K+ E ++
Sbjct: 354 ALEEAEIKEKPETSNLKAVTLEQTAREAPEDKLVSKEVDAAMVKEAAKKVSEAEI 408
>At1g51540.1 68414.m05801 kelch repeat-containing protein contains
Pfam profile PF01344: Kelch motif
Length = 1036
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/54 (25%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +3
Query: 291 EEARQNVSKRMEYI--SKEIKRTDDHICALENKQEALQENLNKLRNDIGKLKLK 446
+E + SK+ E + +E +R+++++C+ K+E + E L + + I ++ LK
Sbjct: 545 DELHVDRSKKEELVHEDEEKQRSNENLCSEAEKEEDIDERLKQRKLAIEEIALK 598
>At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 752
Score = 27.1 bits (57), Expect = 7.7
Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Frame = +3
Query: 141 QKDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEV-----YKLIGPVLVKQDLEEARQ 305
+K + A+ + Q + +Q E K V++E+K R+D + KL ++QDL R
Sbjct: 359 EKKLDAAMARDQDVYNQEKELKMVEDEIKRFRQDIDAADDVKTKLKTASALQQDL---RA 415
Query: 306 NVSKRMEYISKEIKRTDDHI-CALENKQEALQE---NLNKLRNDIGKLKL 443
++ + S KR + I A+++ ++ L+E N+ K +++ LK+
Sbjct: 416 EIAAYKD--SNMGKRNNSDIQAAVDSARKELEEVISNIEKANSEVKTLKI 463
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,668,134
Number of Sequences: 28952
Number of extensions: 133971
Number of successful extensions: 571
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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