Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304G06f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    24   0.94 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    24   0.94 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.7  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   8.7  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   8.7  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = -3

Query: 480 NWVPGPPSSXXXXXFIALNYLMTVQLFMKIRQYKNVY 370
           +++PGPP +      I   Y     +F ++R++  +Y
Sbjct: 37  SYLPGPPVNDIISGNIPPLYTSAENIFKQLREWGRLY 73


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = -3

Query: 480 NWVPGPPSSXXXXXFIALNYLMTVQLFMKIRQYKNVY 370
           +++PGPP +      I   Y     +F ++R++  +Y
Sbjct: 37  SYLPGPPVNDIISGNILPLYTSAENIFKQLREWGRLY 73


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 101 QELLPGRPVQQEHSRWRQRRQELE 30
           Q LLP      E S+WR R   +E
Sbjct: 404 QSLLPAIVELAEDSKWRVRSAIIE 427


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 253 FSRPSVSFLRQIRFFPLHLLNKFADN 330
           +SRP+ S+LR  +F P       ++N
Sbjct: 44  YSRPNWSYLRTPQFEPQQFEVSLSEN 69


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 253 FSRPSVSFLRQIRFFPLHLLNKFADN 330
           +SRP+ S+LR  +F P       ++N
Sbjct: 64  YSRPNWSYLRTPQFEPQQFEVSLSEN 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,418
Number of Sequences: 336
Number of extensions: 1508
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)