Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304G05f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   2.9  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   5.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   5.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.6  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   6.6  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
 Frame = -3

Query: 300 LEKEGNCHEVKKEVSQTNVKKPYNYSAPTSPMPVTHKIPSMPKTVSP-YGHLRRNMIEIE 124
           L+   N  E + E  ++  K PY+Y+A    M      P    T++  Y ++ RN     
Sbjct: 64  LDCSKNSPEKESEEKKSKEKPPYSYNALI--MMAIRNSPEKRLTLNGIYEYIMRNFPYYR 121

Query: 123 EKRNSLNKTGQRNRPLS 73
           E +     + + N  L+
Sbjct: 122 ENKQGWQNSIRHNLSLN 138


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 241 LHICLAYFLFYFMTISFLF 297
           LH+C   +++ F  I F F
Sbjct: 60  LHVCFNSYMYAFTHIFFFF 78


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +1

Query: 232 IWFLHICLAYFLFYFMTISF 291
           +W+  IC + F + F+ + F
Sbjct: 337 MWYFQICGSAFSYLFIMLQF 356


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 187 YLMSYGHWRRRC*VIIWFLHICLAYFLFYF 276
           Y   Y H    C  II+ +H+     ++YF
Sbjct: 259 YYFYYMHLLFCCAFIIFTMHLLFLLCIYYF 288


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 514 LYPDVYYHSLEKLSDKISPLG 452
           LYP V+Y S E   D ++  G
Sbjct: 58  LYPSVHYISRELGEDMVTTTG 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,315
Number of Sequences: 336
Number of extensions: 2292
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)