Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304G05f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 30 0.24
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 29 0.32
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 0.97
SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyc... 27 1.7
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 27 1.7
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 27 2.2
SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA syntheta... 26 3.0
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 3.9
SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr 2|... 26 3.9
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 26 3.9
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 26 3.9
SPBC2D10.11c |||nucleosome assembly protein Nap2 |Schizosaccharo... 26 3.9
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 25 5.2
SPCC613.01 ||SPCC757.14|membrane transporter|Schizosaccharomyces... 25 6.8
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 25 6.8
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 25 6.8
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 25 9.0
SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.0
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 29.9 bits (64), Expect = 0.24
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -3
Query: 300 LEKEGNCHEVKKEVSQTNVKKPYNYSAPTSPMPVTHKIPSMPKTVSP 160
LE + N E++ + V KPY + P +P T++ P P +SP
Sbjct: 526 LESKTN-DEIRSYRPRNVVIKPYAAATPPKNIPSTYRAPQAPSVLSP 571
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 29.5 bits (63), Expect = 0.32
Identities = 23/93 (24%), Positives = 38/93 (40%)
Frame = -3
Query: 450 EIEIYKASQAQVNPASVGAEIKRVSTKFLISPKKEAEVRTIQPTRARSLSLEKEGNCHEV 271
E+ K + N +S E ++ ST+ P+K + V + T L +
Sbjct: 378 EVSSEKVEKVDGNTSSPSKEEEKPSTE----PEKPSVVTQRKETTGTKLGTKLNAKAISF 433
Query: 270 KKEVSQTNVKKPYNYSAPTSPMPVTHKIPSMPK 172
K V+ V P ++ P+ P PV P MP+
Sbjct: 434 KPNVAAP-VFTPGKFTIPSKPAPVNASRPMMPQ 465
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 27.9 bits (59), Expect = 0.97
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 2/111 (1%)
Frame = -3
Query: 327 QPTRARSLSLEKEGNC-HEVKKEVSQT-NVKKPYNYSAPTSPMPVTHKIPSMPKTVSPYG 154
+P+ S S E N H+ ++ V N P N+ M +K+P++ K +
Sbjct: 371 KPSNFHSSSTELSDNSIHQGRRAVDPVVNQNNPSNFEEMI--MNKLNKLPTIDKQILGTS 428
Query: 153 HLRRNMIEIEEKRNSLNKTGQRNRPLSPSRSDFNYQSTPTSQNEGPRPEEK 1
L + +S+NK+ + P R F PTS PEE+
Sbjct: 429 SLTHFQDKTTAIEHSINKSNSKQ----PPRFKFQLPPRPTSNTLPLEPEEE 475
>SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 688
Score = 27.1 bits (57), Expect = 1.7
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
Frame = -3
Query: 300 LEKEGNCHEVKKEVSQTNVKKPYNYSAPTSPMPVTHKIPSMPKTV-SPYGHLRRNMIE-- 130
L+KE N + K S+ + Y Y P+SP T K + + + SP + + IE
Sbjct: 62 LQKEENSNTSKASSSEDEIAPKYLY--PSSPSKSTKKPHNETEPLLSPQFIDKPSNIETP 119
Query: 129 --IEEKRNSLNKTGQRNRPLSPSRSDFNYQSTPTSQNEGPR 13
IE S N T Q LSP+ TP + P+
Sbjct: 120 VKIESPHVSQNNTFQSYSELSPNVETSLTMKTPPAHASTPK 160
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 27.1 bits (57), Expect = 1.7
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Frame = -3
Query: 384 RVSTKFLISPKKEAEVRTIQPTRARSLSLEKEGNCHEVKKEVSQTNVKKPYNYSAPTSPM 205
RVS+ L SP K+A + T QP L + + ++ + SA +S
Sbjct: 244 RVSSPKLFSPSKQAIMGTRQPNATSGSPLSVTPFLQKTSTSIGLSSSPPQSSPSAQSSQP 303
Query: 204 PVTHKIP-SMPKTVSPYGHLRRNMIE-IEEKRNSLNKTGQRNRPLSPS 67
K P SM + S +L++++ + I + +N P SPS
Sbjct: 304 FSRDKYPHSMTVSPSNARYLKKHLDDTIPSNVSDINHNDHLKIPQSPS 351
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 26.6 bits (56), Expect = 2.2
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -2
Query: 226 LSTDVSNARNS*DTIHA*DGFSIRPFEKKHDRNRGKKEFVEQNRSTQQTFV 74
+ D + +++ + +HA +G P E ++ R KK FVE + FV
Sbjct: 110 VENDFATVQSASNGVHAINGKRTHPDESENPRKLPKKNFVEAIDANSPGFV 160
>SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA synthetases
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 26.2 bits (55), Expect = 3.0
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = -3
Query: 357 PKKEAEVRTIQPTRARSLSLEKEGNCHEVKKEVSQTNVKKPYNYSAPTSPMPVTHKIPSM 178
P +EA V++++ +KE + KKE KK AP P +PSM
Sbjct: 225 PSQEASVKSVEKAPKGLEGAKKE---KQNKKEKKDKKDKKDKKEKAPKEPPKAATPVPSM 281
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 25.8 bits (54), Expect = 3.9
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 193 MSYGHWRRRC 222
M YGHWRR C
Sbjct: 2600 MFYGHWRRNC 2609
>SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 3.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 243 KKPYNYSAPTSPMPVTHKIPSMP 175
KKP S P +PV+H +P P
Sbjct: 157 KKPSKPSKPRKKVPVSHPLPPTP 179
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 241 LHICLAYFLFYFMTISFLF*RQASSSSRLY 330
L C++ F+F + +SFL Q + RLY
Sbjct: 23 LFACISIFIFALLALSFLSLLQPDTVQRLY 52
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 25.8 bits (54), Expect = 3.9
Identities = 30/134 (22%), Positives = 48/134 (35%), Gaps = 10/134 (7%)
Frame = -3
Query: 381 VSTKFLISPKKEAEVRTIQPTRARSLS-----LEKEGNCHEVKKEVSQTNVKKP-YNYSA 220
+S FL P A V + P + +S EK + + KE P + +SA
Sbjct: 150 LSNVFLEQPTSNAVVSEVNPQQQKSQDSSSFVTEKPASSEKEDKEKPLVPPGAPRFGFSA 209
Query: 219 PTSPMPVTHKIPSMPKTVSPYGHLRRNMIEIEEKRNSLNKTGQRNRPLSPSRSDFNYQST 40
P + S +G E +EK S N+T + ++ FN +
Sbjct: 210 PALGSSFQFNSSAFTPKGS-FGEKSATEAEAKEKETSSNQTATGTAATTTNQFSFNTAAN 268
Query: 39 P----TSQNEGPRP 10
P +NE +P
Sbjct: 269 PFAFAKKENEESKP 282
>SPBC2D10.11c |||nucleosome assembly protein Nap2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 379
Score = 25.8 bits (54), Expect = 3.9
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Frame = -3
Query: 366 LISPKKEAEVRTIQPTRARSLSLEKEGNCHEVKKEVSQ--TN--VKKPYNYS---APTSP 208
+I+P+ E +R++ R +LS + G E + + + TN + K Y Y +P+
Sbjct: 183 MITPEDENVLRSLSDIRFTNLSGDVHGYKLEFEFDSNDYFTNKILTKTYYYKDDLSPSGE 242
Query: 207 MPVTHKIPSMPKTVSPYGHLRRNMIEIEEKRNSLNKTGQRN--RPLSPSRSDFNYQSTP 37
H + P +L + +E K+ KT Q R P+ S FN+ S P
Sbjct: 243 FLYDHAEGDKINWIKPEKNLT---VRVETKKQRNRKTNQTRLVRTTVPNDSFFNFFSPP 298
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 25.4 bits (53), Expect = 5.2
Identities = 19/70 (27%), Positives = 29/70 (41%)
Frame = -3
Query: 225 SAPTSPMPVTHKIPSMPKTVSPYGHLRRNMIEIEEKRNSLNKTGQRNRPLSPSRSDFNYQ 46
S+P P +P MP+ V+ G + E R S N + R +PL + S
Sbjct: 535 SSPVQPTSYNRTLPPMPEVVAYKG-------DEESPRVSRNTSLARRKPLPDTESHSPSP 587
Query: 45 STPTSQNEGP 16
S +S + P
Sbjct: 588 SATSSIKKNP 597
>SPCC613.01 ||SPCC757.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 497
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 276 EVKKEVSQTNVKKPYNYSAPTSPMPVTHK 190
EV+ + TNV+KP +++ T+P+ K
Sbjct: 280 EVRVGNTATNVRKPESFTGKTAPLSFKQK 308
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 25.0 bits (52), Expect = 6.8
Identities = 18/80 (22%), Positives = 34/80 (42%)
Frame = -3
Query: 336 RTIQPTRARSLSLEKEGNCHEVKKEVSQTNVKKPYNYSAPTSPMPVTHKIPSMPKTVSPY 157
R + R ++ L+ G + KEV+ + +++ +P+P T+ S +
Sbjct: 71 RLVSHPRTKNFDLQGNGGQNSALKEVNTPAYQSMHHFEHLITPLPSTNASHSEVSLSAGV 130
Query: 156 GHLRRNMIEIEEKRNSLNKT 97
L N E + S+NKT
Sbjct: 131 NDLNSNS-EHDLLPKSVNKT 149
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 25.0 bits (52), Expect = 6.8
Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 2/98 (2%)
Frame = -3
Query: 444 EIYKASQAQ--VNPASVGAEIKRVSTKFLISPKKEAEVRTIQPTRARSLSLEKEGNCHEV 271
+IY SQ V A+ + S+ L+S + + P+ S S +
Sbjct: 100 QIYAQSQQFNIVEGAASSSSSSSSSSSSLVSSTTSSS-SSATPSTTSSSSSSSSSSSSSS 158
Query: 270 KKEVSQTNVKKPYNYSAPTSPMPVTHKIPSMPKTVSPY 157
K S ++ + S TS +HK S TV PY
Sbjct: 159 SKSSSSSSKSSSRSSSRTTSHRTTSHKSSSYRPTVFPY 196
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 351 KEAEVRTIQPTRARSLSLEKEGNCHEVKKEVSQTNVK 241
KEAE++ P R SLS + C E + + + K
Sbjct: 1035 KEAELQATDPKRIYSLSADMVKACDEAVERLGADDTK 1071
>SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 700
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = -3
Query: 291 EGNCHEVKKEVSQTNVKKPYNYSAPTSPMPVTHKIPSMPKTVSPYGHLRRNMIEIEE 121
+G+ ++ ++ S P++ P+ P +P++ +SPY H RN + I E
Sbjct: 16 DGSFNDPFRQPSMNLPTPPHDDGLPSIPRSTA--LPNLSNRLSPYSH--RNYLPIPE 68
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,009,493
Number of Sequences: 5004
Number of extensions: 38597
Number of successful extensions: 191
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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