Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304G03f
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 25 0.41
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 25 0.41
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 23 1.6
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 23 2.2
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 22 3.8
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 22 3.8
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 21 6.6
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.7
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.7
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.7
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.7
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.7
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 8.7
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 25.0 bits (52), Expect = 0.41
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 414 SPSCMNFLSSPVERRTGLVPFQDSSNMLPNESAASPLMVPEP 289
SP ++ LSS ++P +S P+ S ASP M+ P
Sbjct: 683 SPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQSP 724
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 25.0 bits (52), Expect = 0.41
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 414 SPSCMNFLSSPVERRTGLVPFQDSSNMLPNESAASPLMVPEP 289
SP ++ LSS ++P +S P+ S ASP M+ P
Sbjct: 575 SPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQSP 616
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 390 SSPVERRTGLVPFQDSSNMLPNESAASPLMVPEP 289
S+P+ +T P ++N + SA+SP + P
Sbjct: 147 SAPILTKTSPTPVSINNNTSTSSSASSPSVTAAP 180
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 22.6 bits (46), Expect = 2.2
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 175 GLFSLNVHFQFDVEIEFIVVSQVGE 101
G + + H +F VE+ +V ++GE
Sbjct: 598 GYWLFHCHIEFHVEVGMALVFKIGE 622
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 389 PHQSKGERAWCPSRTVP 339
PH+ G CPSR+ P
Sbjct: 338 PHKCNGNAHNCPSRSHP 354
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 389 PHQSKGERAWCPSRTVP 339
PH+ G CPSR+ P
Sbjct: 345 PHKCNGNAHNCPSRSHP 361
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 21.0 bits (42), Expect = 6.6
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 489 CYRPYP 506
CYRPYP
Sbjct: 259 CYRPYP 264
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 20.6 bits (41), Expect = 8.7
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 182 PPGTFQSECPLPV 144
PPG F+S C + +
Sbjct: 120 PPGIFKSTCKMDI 132
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 20.6 bits (41), Expect = 8.7
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 182 PPGTFQSECPLPV 144
PPG F+S C + +
Sbjct: 120 PPGIFKSTCKMDI 132
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 20.6 bits (41), Expect = 8.7
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 182 PPGTFQSECPLPV 144
PPG F+S C + +
Sbjct: 120 PPGIFKSTCKMDI 132
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 20.6 bits (41), Expect = 8.7
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 182 PPGTFQSECPLPV 144
PPG F+S C + +
Sbjct: 120 PPGIFKSTCKIDI 132
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 20.6 bits (41), Expect = 8.7
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 182 PPGTFQSECPLPV 144
PPG F+S C + +
Sbjct: 120 PPGIFKSTCKMDI 132
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 20.6 bits (41), Expect = 8.7
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -3
Query: 177 GDFSV*MSTSSLMSKLNLSSCLK*GNGVGF 88
GDF S ++ LN + NGVGF
Sbjct: 596 GDFEGNQVEGSPVTSLNREEIKRLDNGVGF 625
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,881
Number of Sequences: 336
Number of extensions: 2988
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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