Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304G03f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0724 - 5415218-5415280,5415398-5415523,5415614-5415710,541... 174 3e-44
06_03_1146 - 28004896-28005554,28005664-28005844 33 0.14
01_06_0637 + 30763657-30763858,30765600-30766261 33 0.18
02_05_0280 + 27435166-27435254,27436348-27436437,27436764-274368... 30 1.3
09_04_0071 - 14313737-14315091,14316131-14316207,14316604-143167... 29 1.7
05_07_0153 - 28051496-28051801,28051933-28052271 29 2.3
01_06_0453 + 29501600-29502403 29 3.0
01_06_0426 + 29270744-29271064 29 3.0
08_01_1034 - 10482670-10483400,10483442-10483964 28 4.0
07_03_1340 + 25887135-25887372,25887676-25887798,25888388-258885... 28 4.0
06_03_0818 - 24963652-24964983 28 5.2
02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530 28 5.2
10_08_1018 + 22298098-22298691 27 6.9
04_04_1694 - 35419278-35419565,35419744-35419861,35420404-354204... 27 6.9
02_05_0769 + 31616644-31616875,31616980-31617203,31617308-316174... 27 6.9
12_02_0386 + 18429675-18430679,18431001-18431111,18431139-184311... 27 9.1
11_08_0022 + 27733247-27733935,27735722-27735981,27736213-277364... 27 9.1
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302... 27 9.1
07_03_1359 - 25985936-25986083,25986424-25986782,25987026-259871... 27 9.1
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 27 9.1
02_03_0388 + 18429538-18430598,18430971-18431081,18431165-184312... 27 9.1
02_01_0488 - 3518710-3518798,3518927-3519243,3519745-3519872 27 9.1
01_02_0053 + 10673264-10674510,10674552-10674576,10674802-106748... 27 9.1
01_01_0650 - 4948852-4950012 27 9.1
>02_01_0724 -
5415218-5415280,5415398-5415523,5415614-5415710,
5415797-5415861,5415964-5416026,5416127-5416197,
5416430-5416489,5416564-5416663,5416863-5416938,
5417284-5417358,5417451-5417575,5417664-5417722,
5418031-5418109,5418303-5418533
Length = 429
Score = 174 bits (424), Expect = 3e-44
Identities = 76/166 (45%), Positives = 109/166 (65%)
Frame = +2
Query: 8 KNLGSTISPWIVTLEALRPFIVDNFPQNPTPFPYLRHDDKFNFDIKLEVDIQTEKSPVVT 187
K+ +T+SPWIVT++AL+PF + Q P P PYL + N+DI LEV I+ ++ +
Sbjct: 266 KSFSTTVSPWIVTMDALKPFTCEAPKQEPEPLPYLAEKNHVNYDIPLEVWIKPKEQSEPS 325
Query: 188 TVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGSMLELSWKGTKP 367
V +SN++++YWT+ QQLA T+ GCNLRPGD+ +GT+SG +S G +LEL+W G K
Sbjct: 326 MVAKSNFKHLYWTLTQQLAHHTVNGCNLRPGDMFATGTLSGPETESLGCLLELTWNGQKE 385
Query: 368 VRLSTGEERKFIQDGDTVTLRGHCLNATGLRIGFGRCEGKLLPAIP 505
+ + RKF++DGD V L C G +GFG C GK+LPA+P
Sbjct: 386 ISVG-NSTRKFLEDGDEVILTA-CCKGEGYNVGFGTCTGKVLPALP 429
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = -3
Query: 483 PSHLPNPILSPVALRQWPRRVTVSPSCMNFLSSPVERRTGLVPFQDSSNMLPNESAASPL 304
P +P+P SP + +++PS + SP + + P + P+ A
Sbjct: 154 PVPMPSPASSPPSPAPAAATPSLAPSPVATTPSPSPSVSPMAPAPAPTTSTPSSPPAPAA 213
Query: 303 MVPEPSKSPGLRLQP 259
M P PS +PG QP
Sbjct: 214 MAPSPSTTPGGVAQP 228
>01_06_0637 + 30763657-30763858,30765600-30766261
Length = 287
Score = 32.7 bits (71), Expect = 0.18
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 366 GLVPFQDSSNMLPNESAASPLMVPEPSKSPGLRLQP 259
G +D N LP+ + SP ++P P ++P RL P
Sbjct: 18 GSALLEDGPNPLPSHLSPSPSLLPSPKRTPTCRLSP 53
>02_05_0280 +
27435166-27435254,27436348-27436437,27436764-27436866,
27437318-27437377,27437745-27439148,27439227-27439328,
27439424-27439609,27439695-27439820,27439905-27440000,
27440509-27440574
Length = 773
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +1
Query: 397 IHTRRRHGHSTRPLPQ-RDRTQNRVREMR 480
+ R R G STRP P+ R + Q+RV+E+R
Sbjct: 546 VKKRARPGESTRPRPKDRQQIQDRVKELR 574
>09_04_0071 -
14313737-14315091,14316131-14316207,14316604-14316725,
14316838-14316924,14317000-14317066,14317135-14317290,
14318689-14318837
Length = 670
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -3
Query: 465 PILSPVALRQWPRRVTVSPSCMNFLSSPVERRTGLVPFQDSSNMLPNESAASPLMVPEPS 286
P L V + V SP C + +P +VPF + +M+P +SA P + +P+
Sbjct: 602 PCLEIVVSTPSEQVVNQSPGCQSQSPAPY---LAIVPFDAAHDMVPLQSADPPGLTDDPT 658
Query: 285 KSPGL 271
+ G+
Sbjct: 659 ITSGI 663
>05_07_0153 - 28051496-28051801,28051933-28052271
Length = 214
Score = 29.1 bits (62), Expect = 2.3
Identities = 26/81 (32%), Positives = 29/81 (35%), Gaps = 7/81 (8%)
Frame = +3
Query: 285 CSARAPSAGRRQTRLGAC-------WNCPGRAPSPFAFRLVRRGNSYKTETRSLYAATAS 443
C+ AP+AGR R C W R P G YK E R AA A
Sbjct: 80 CNKEAPAAGRLPRRCANCDTMSTPLWRNGPRGPKSLCNAC---GIRYKKEERRAAAAVAP 136
Query: 444 TRPDSE*GSGDARGNCYRPYP 506
T P S +G CY P
Sbjct: 137 TPPPSL-DTGAGYAYCYSRQP 156
>01_06_0453 + 29501600-29502403
Length = 267
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 294 RAPSAGRRQT-RLGACWNCPGRAPSPFAFRLVRRGNSYKTETRSLYAATAST 446
RAP+ +RQ ++ P RAP+P R V+ + ET + ATAS+
Sbjct: 181 RAPAQAQRQVLQVQRAQPPPPRAPAPAPARAVKSAAREEVETAQVGLATASS 232
>01_06_0426 + 29270744-29271064
Length = 106
Score = 28.7 bits (61), Expect = 3.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 368 RAWCPSRTVPTCSQTSLPPPR 306
R+W +R +P C+ +PPPR
Sbjct: 6 RSWWMARVLPPCAMRRVPPPR 26
>08_01_1034 - 10482670-10483400,10483442-10483964
Length = 417
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 422 TLRGHCLNATGLRIGFGRCEGKLLPAIP 505
+L+ L++ GLRIGFG G+LL P
Sbjct: 314 SLKNLYLSSDGLRIGFGDVSGRLLRRCP 341
>07_03_1340 +
25887135-25887372,25887676-25887798,25888388-25888527,
25888680-25888817,25888898-25889119
Length = 286
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Frame = +3
Query: 258 RAATSDRETCSARAPSAGRRQTRL----GACWNCPGRAPSPFAFRLVRR---GNSYKTET 416
RA ++ TC+A A R+ L G + P RAPS F F V R G + T
Sbjct: 5 RAISTLLHTCAAAAAGGSSRRVALAPPLGRSFRVPWRAPSAFVFDEVARAAGGERRRVST 64
Query: 417 RS 422
R+
Sbjct: 65 RA 66
>06_03_0818 - 24963652-24964983
Length = 443
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 459 LSPVALRQWPR-RVTVSPSCMNFLSSPVERRTGLVPFQDSSNMLPNESAASPLM 301
+SP L PR R+ PSC ++PV RR ++P +S P +A P M
Sbjct: 374 ISPEFLAGAPRPRIAGVPSCNATQAAPVTRRPVVMPVPLASAEKPAAAAPPPPM 427
>02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530
Length = 519
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +3
Query: 237 SWRSKL*RAATSDRETCSARAPSAGRRQTRLGACWNCPGRAPSPFAFRLVRRGNSYKTET 416
+W RA +RE+ +A AP+AG R A G++ ++G +
Sbjct: 13 AWALDAERAEEEERESAAAPAPAAGFPSLREAAAGAAAGKSKK-------KKGTTLSLSE 65
Query: 417 RSLYAATASTRP 452
+ Y A A RP
Sbjct: 66 FTTYGAAAGRRP 77
>10_08_1018 + 22298098-22298691
Length = 197
Score = 27.5 bits (58), Expect = 6.9
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = -3
Query: 489 SFPSHLPNPILSPVALRQWPRRVTVSPSCMNFLSSPVERRTGLVPFQDS--SNMLPNESA 316
SFP+ LP IL + L + + ++FLS + RR L+ + S+ + +S+
Sbjct: 29 SFPTLLPVFILFVLLLCFLS--IFLVRDLLHFLSLCLRRRRLLLRHGEDHDSSSVSMQSS 86
Query: 315 ASPLMVPEPSKSPGL 271
ASP+ P K PGL
Sbjct: 87 ASPINAQAPRKPPGL 101
>04_04_1694 -
35419278-35419565,35419744-35419861,35420404-35420490,
35420909-35420931,35421647-35421843,35421964-35422159,
35422382-35422481,35423288-35423374,35424053-35424282,
35424678-35424763,35425148-35425271,35425415-35428573,
35430014-35430019
Length = 1566
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 363 LVPFQDSSNMLPNESAASPLMVPEPSKSPGL 271
L+ ++S++LP +AA+P P P+ +P L
Sbjct: 91 LLHVAETSSLLPTAAAAAPAPPPPPAPAPSL 121
>02_05_0769 +
31616644-31616875,31616980-31617203,31617308-31617426,
31617528-31617684,31617928-31618029,31618111-31618230,
31618761-31618855,31619900-31619984,31620090-31620180,
31620534-31620618,31620702-31620806,31621019-31621894,
31622016-31622124,31622266-31622414,31622518-31622737
Length = 922
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -2
Query: 334 APKRVCRLPADGARAEQVSRSEVAARYSLLRQLLFHRPIHVPIV 203
A KR+C +P D + R+++ A ++++ HR VPIV
Sbjct: 117 AGKRICNIPVDVIYTSSLIRAQMTAMLAMMQ----HRRKKVPIV 156
>12_02_0386 +
18429675-18430679,18431001-18431111,18431139-18431195,
18431552-18431589,18431688-18431733,18431811-18431849
Length = 431
Score = 27.1 bits (57), Expect = 9.1
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Frame = +2
Query: 227 VKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGSMLE---LSWKGTKPVRLSTGEERK 397
VK + T+ CN+R GD+ G A + F M E +SW L G+
Sbjct: 3 VKNVVVGNTMVACNVRAGDM-------GAAREVFDGMAERDPISWNTLMSGYLHLGDTAT 55
Query: 398 FIQDGDTVTLRGHCLNATGLRIGFGRCEGKLLPAIP-FPRMK 520
+ D +T+R +N+ I EG L + F RM+
Sbjct: 56 VRELFDEMTVRN--VNSWNTMIAACSEEGSLADTVKVFNRMR 95
>11_08_0022 +
27733247-27733935,27735722-27735981,27736213-27736404,
27737695-27738686
Length = 710
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 266 CSPL*FAAPAAVSPSNTCTDSLNGK 192
CS APA VSP++ C ++ NG+
Sbjct: 269 CSSTSRVAPACVSPNSYCVNTTNGQ 293
>09_04_0512 +
18226981-18227143,18227648-18229555,18229649-18230295,
18230710-18231949,18232085-18232419,18232500-18232577,
18232872-18232978,18233020-18233062
Length = 1506
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 345 SSNMLPNESAASPLMVPEPSKSPGLRLQPVIVCCAS 238
+S P+ SAASP ++P + G QP CC S
Sbjct: 524 NSQCSPSRSAASPDLLPLRLVNSGDVYQPSFSCCKS 559
>07_03_1359 -
25985936-25986083,25986424-25986782,25987026-25987153,
25987609-25987727,25988253-25988320
Length = 273
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +1
Query: 391 EEIHTRRRHG---HSTRPLPQRDRTQNRVRE 474
E+ + HG H TRP P +D QNR R+
Sbjct: 205 EDSEPSQEHGISDHVTRPQPSKDAWQNRSRD 235
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 400 HTRRRHGHSTRPLPQ 444
H RRRH HS +P PQ
Sbjct: 46 HHRRRHRHSKKPKPQ 60
>02_03_0388 +
18429538-18430598,18430971-18431081,18431165-18431237,
18431513-18431695
Length = 475
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/59 (18%), Positives = 24/59 (40%)
Frame = -3
Query: 429 RRVTVSPSCMNFLSSPVERRTGLVPFQDSSNMLPNESAASPLMVPEPSKSPGLRLQPVI 253
+++++ PS NF + D L S+ VP+ + P ++P++
Sbjct: 181 KKISIDPSVKNFFRGMSAPAKEAIKLSDYERTLKKASSGKSKPVPQLGEQPNQEIEPLV 239
>02_01_0488 - 3518710-3518798,3518927-3519243,3519745-3519872
Length = 177
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 104 PYLRHDDKFNFDIKLEVDIQTEKSPV 181
P+ +HD N IKL++ + T K PV
Sbjct: 144 PHTQHDFASNASIKLKISLSTIKRPV 169
>01_02_0053 +
10673264-10674510,10674552-10674576,10674802-10674886,
10675074-10675084
Length = 455
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 465 PILSPVALRQWPRRVTVSPSCMNFLSSPVERRTGLVPFQDSSNMLPNESAASPL 304
P+L P LR++P ++VSP N ++SP + F + L + AS L
Sbjct: 81 PVLVPTFLRRYPTLLSVSPP-PNPVASPSPHLLSFLEFASRHHALHSPLLASRL 133
>01_01_0650 - 4948852-4950012
Length = 386
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = -3
Query: 486 FPSHLPNPILSPVALRQWPRRVTVSPSCMNFLSSPVERRTGLVPFQDSSNMLPNESAASP 307
F +H P+ + A + PR V SP ++ SP+ RR + + M + S S
Sbjct: 169 FFAHTPDQLRVLPAQQSSPRSVASSPLAESYDGSPL-RRQAFESYLTKTIM--SSSPTST 225
Query: 306 LMVP---EPSKSPGL 271
LM P PS+SP L
Sbjct: 226 LMSPPKSPPSESPPL 240
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,827,695
Number of Sequences: 37544
Number of extensions: 403122
Number of successful extensions: 1412
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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