Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304G03f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X51728-1|CAA36016.1| 349|Homo sapiens protein ( Human mRNA for ... 215 6e-56
M55150-1|AAA52422.1| 419|Homo sapiens fumarylacetoacetate hydro... 215 6e-56
BX537608-1|CAD97795.1| 349|Homo sapiens hypothetical protein pr... 215 6e-56
BT007160-1|AAP35824.1| 419|Homo sapiens fumarylacetoacetate hyd... 215 6e-56
BC002527-1|AAH02527.1| 419|Homo sapiens fumarylacetoacetate hyd... 215 6e-56
BC113374-1|AAI13375.1| 151|Homo sapiens hypothetical protein LO... 32 1.1
BC101782-1|AAI01783.1| 151|Homo sapiens hypothetical protein LO... 32 1.1
AK056625-1|BAB71234.1| 151|Homo sapiens protein ( Homo sapiens ... 32 1.1
X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein. 31 2.4
M33907-1|AAA52672.1| 261|Homo sapiens HLA-DQB1 protein. 30 4.3
M26042-1|AAA36270.1| 261|Homo sapiens protein ( Human MHC class... 30 4.3
L34100-1|AAC41968.1| 229|Homo sapiens MHC class II HLA-DQ-beta-... 30 4.3
L34099-1|AAC41967.1| 229|Homo sapiens MHC class II HLA-DQ-beta-... 30 4.3
AY656683-1|AAV71030.1| 261|Homo sapiens MHC class II antigen pr... 30 4.3
AY375863-1|AAQ88037.1| 234|Homo sapiens MHC class II antigen pr... 30 4.3
AY375862-1|AAQ88036.1| 234|Homo sapiens MHC class II antigen pr... 30 4.3
AY375861-1|AAQ88035.1| 227|Homo sapiens MHC class II antigen pr... 30 4.3
AY375860-1|AAQ88034.1| 220|Homo sapiens MHC class II antigen pr... 30 4.3
AK128338-1|BAC87390.1| 909|Homo sapiens protein ( Homo sapiens ... 29 7.5
AB081753-1|BAC16513.1| 985|Homo sapiens RIN3 protein. 29 7.5
Y08569-1|CAA69880.1| 1015|Homo sapiens Islet Cell Autoantigen Re... 29 9.9
U92032-1|AAB91991.1| 261|Homo sapiens MHC class II DQ-beta prot... 29 9.9
U81561-1|AAB68603.1| 998|Homo sapiens protein tyrosine phosphat... 29 9.9
U66702-1|AAC50742.1| 1015|Homo sapiens phogrin protein. 29 9.9
U65065-1|AAC51643.1| 986|Homo sapiens tyrosine phosphatase IA-2... 29 9.9
M81141-1|AAA59772.1| 261|Homo sapiens lymphocyte antigen protein. 29 9.9
M81140-1|AAA59771.1| 261|Homo sapiens lymphocyte antigen protein. 29 9.9
M22403-1|AAA52596.1| 626|Homo sapiens platelet membrane glycopr... 29 9.9
L40179-1|AAC41976.1| 229|Homo sapiens MHC class II HLA-DQ-beta-... 29 9.9
L34095-1|AAC41963.1| 229|Homo sapiens MHC class II HLA-DQ-beta-... 29 9.9
K02405-1|AAA75521.1| 261|Homo sapiens MHC HLA-DC3-beta protein. 29 9.9
J02940-1|AAA52595.1| 626|Homo sapiens GP1BA protein. 29 9.9
J00198-1|AAA59788.1| 230|Homo sapiens HLA-DRB1 protein. 29 9.9
BC071570-1|AAH71570.1| 633|Homo sapiens PTPRN2 protein protein. 29 9.9
BC034040-1|AAH34040.1| 986|Homo sapiens protein tyrosine phosph... 29 9.9
BC027955-1|AAH27955.1| 626|Homo sapiens glycoprotein Ib (platel... 29 9.9
AY663407-1|AAU88012.1| 261|Homo sapiens MHC class II antigen pr... 29 9.9
AY663399-1|AAU87991.1| 261|Homo sapiens MHC class II antigen pr... 29 9.9
AY375844-1|AAQ88018.1| 234|Homo sapiens MHC class II antigen pr... 29 9.9
AY375843-1|AAQ88017.1| 234|Homo sapiens MHC class II antigen pr... 29 9.9
AY375842-1|AAQ88016.1| 234|Homo sapiens MHC class II antigen pr... 29 9.9
AY333122-1|AAP93137.1| 183|Homo sapiens MHC class II HLA-DQ-bet... 29 9.9
AL935026-3|CAI18446.1| 224|Homo sapiens major histocompatibilit... 29 9.9
AL935026-2|CAI18445.1| 261|Homo sapiens major histocompatibilit... 29 9.9
AL832450-1|CAD38626.1| 217|Homo sapiens hypothetical protein pr... 29 9.9
AL731683-2|CAO03406.1| 261|Homo sapiens major histocompatibilit... 29 9.9
AF395009-1|AAK71325.1| 626|Homo sapiens glycoprotein Ib (platel... 29 9.9
AF007555-1|AAB63600.1| 1015|Homo sapiens IAR/receptor-like prote... 29 9.9
AB086948-1|BAC10305.1| 626|Homo sapiens platelet glycoprotein I... 29 9.9
AB038516-1|BAB12038.1| 626|Homo sapiens platelet glycoprotein I... 29 9.9
AB002385-1|BAA20841.2| 1042|Homo sapiens KIAA0387 protein. 29 9.9
>X51728-1|CAA36016.1| 349|Homo sapiens protein ( Human mRNA for
fumarylacetoacetase (EC 3.7.1.2). ).
Length = 349
Score = 215 bits (526), Expect = 6e-56
Identities = 92/165 (55%), Positives = 121/165 (73%)
Frame = +2
Query: 8 KNLGSTISPWIVTLEALRPFIVDNFPQNPTPFPYLRHDDKFNFDIKLEVDIQTEKSPVVT 187
K+ G+T+SPW+V ++AL PF V N Q+P P PYL HD+ + FDI L V+++ E
Sbjct: 183 KSFGTTVSPWVVPMDALMPFAVPNPKQDPRPLPYLCHDEPYTFDINLSVNLKGEGMSQAA 242
Query: 188 TVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGSMLELSWKGTKP 367
T+C+SN++YMYWT+ QQL ++ GCNLRPGDLL SGTISG ++FGSMLELSWKGTKP
Sbjct: 243 TICKSNFKYMYWTMLQQLTHHSVNGCNLRPGDLLASGTISGPEPENFGSMLELSWKGTKP 302
Query: 368 VRLSTGEERKFIQDGDTVTLRGHCLNATGLRIGFGRCEGKLLPAI 502
+ L G+ RKF+ DGD V + G+C G RIGFG+C GK+LPA+
Sbjct: 303 IDLGNGQTRKFLLDGDEVIITGYC-QGDGYRIGFGQCAGKVLPAL 346
>M55150-1|AAA52422.1| 419|Homo sapiens fumarylacetoacetate
hydrolase protein.
Length = 419
Score = 215 bits (526), Expect = 6e-56
Identities = 92/165 (55%), Positives = 121/165 (73%)
Frame = +2
Query: 8 KNLGSTISPWIVTLEALRPFIVDNFPQNPTPFPYLRHDDKFNFDIKLEVDIQTEKSPVVT 187
K+ G+T+SPW+V ++AL PF V N Q+P P PYL HD+ + FDI L V+++ E
Sbjct: 253 KSFGTTVSPWVVPMDALMPFAVPNPKQDPRPLPYLCHDEPYTFDINLSVNLKGEGMSQAA 312
Query: 188 TVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGSMLELSWKGTKP 367
T+C+SN++YMYWT+ QQL ++ GCNLRPGDLL SGTISG ++FGSMLELSWKGTKP
Sbjct: 313 TICKSNFKYMYWTMLQQLTHHSVNGCNLRPGDLLASGTISGPEPENFGSMLELSWKGTKP 372
Query: 368 VRLSTGEERKFIQDGDTVTLRGHCLNATGLRIGFGRCEGKLLPAI 502
+ L G+ RKF+ DGD V + G+C G RIGFG+C GK+LPA+
Sbjct: 373 IDLGNGQTRKFLLDGDEVIITGYC-QGDGYRIGFGQCAGKVLPAL 416
>BX537608-1|CAD97795.1| 349|Homo sapiens hypothetical protein
protein.
Length = 349
Score = 215 bits (526), Expect = 6e-56
Identities = 92/165 (55%), Positives = 121/165 (73%)
Frame = +2
Query: 8 KNLGSTISPWIVTLEALRPFIVDNFPQNPTPFPYLRHDDKFNFDIKLEVDIQTEKSPVVT 187
K+ G+T+SPW+V ++AL PF V N Q+P P PYL HD+ + FDI L V+++ E
Sbjct: 183 KSFGTTVSPWVVPMDALMPFAVPNPKQDPRPLPYLCHDEPYTFDINLSVNLKGEGMSQAA 242
Query: 188 TVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGSMLELSWKGTKP 367
T+C+SN++YMYWT+ QQL ++ GCNLRPGDLL SGTISG ++FGSMLELSWKGTKP
Sbjct: 243 TICKSNFKYMYWTMLQQLTHHSVNGCNLRPGDLLASGTISGPEPENFGSMLELSWKGTKP 302
Query: 368 VRLSTGEERKFIQDGDTVTLRGHCLNATGLRIGFGRCEGKLLPAI 502
+ L G+ RKF+ DGD V + G+C G RIGFG+C GK+LPA+
Sbjct: 303 IDLGNGQTRKFLLDGDEVIITGYC-QGDGYRIGFGQCAGKVLPAL 346
>BT007160-1|AAP35824.1| 419|Homo sapiens fumarylacetoacetate
hydrolase (fumarylacetoacetase) protein.
Length = 419
Score = 215 bits (526), Expect = 6e-56
Identities = 92/165 (55%), Positives = 121/165 (73%)
Frame = +2
Query: 8 KNLGSTISPWIVTLEALRPFIVDNFPQNPTPFPYLRHDDKFNFDIKLEVDIQTEKSPVVT 187
K+ G+T+SPW+V ++AL PF V N Q+P P PYL HD+ + FDI L V+++ E
Sbjct: 253 KSFGTTVSPWVVPMDALMPFAVPNPKQDPRPLPYLCHDEPYTFDINLSVNLKGEGMSQAA 312
Query: 188 TVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGSMLELSWKGTKP 367
T+C+SN++YMYWT+ QQL ++ GCNLRPGDLL SGTISG ++FGSMLELSWKGTKP
Sbjct: 313 TICKSNFKYMYWTMLQQLTHHSVNGCNLRPGDLLASGTISGPEPENFGSMLELSWKGTKP 372
Query: 368 VRLSTGEERKFIQDGDTVTLRGHCLNATGLRIGFGRCEGKLLPAI 502
+ L G+ RKF+ DGD V + G+C G RIGFG+C GK+LPA+
Sbjct: 373 IDLGNGQTRKFLLDGDEVIITGYC-QGDGYRIGFGQCAGKVLPAL 416
>BC002527-1|AAH02527.1| 419|Homo sapiens fumarylacetoacetate
hydrolase (fumarylacetoacetase) protein.
Length = 419
Score = 215 bits (526), Expect = 6e-56
Identities = 92/165 (55%), Positives = 121/165 (73%)
Frame = +2
Query: 8 KNLGSTISPWIVTLEALRPFIVDNFPQNPTPFPYLRHDDKFNFDIKLEVDIQTEKSPVVT 187
K+ G+T+SPW+V ++AL PF V N Q+P P PYL HD+ + FDI L V+++ E
Sbjct: 253 KSFGTTVSPWVVPMDALMPFAVPNPKQDPRPLPYLCHDEPYTFDINLSVNLKGEGMSQAA 312
Query: 188 TVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGSMLELSWKGTKP 367
T+C+SN++YMYWT+ QQL ++ GCNLRPGDLL SGTISG ++FGSMLELSWKGTKP
Sbjct: 313 TICKSNFKYMYWTMLQQLTHHSVNGCNLRPGDLLASGTISGPEPENFGSMLELSWKGTKP 372
Query: 368 VRLSTGEERKFIQDGDTVTLRGHCLNATGLRIGFGRCEGKLLPAI 502
+ L G+ RKF+ DGD V + G+C G RIGFG+C GK+LPA+
Sbjct: 373 IDLGNGQTRKFLLDGDEVIITGYC-QGDGYRIGFGQCAGKVLPAL 416
>BC113374-1|AAI13375.1| 151|Homo sapiens hypothetical protein
LOC150538 protein.
Length = 151
Score = 32.3 bits (70), Expect = 1.1
Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
Frame = -3
Query: 504 GMAGNSFPSHLPNPILSPVALRQWPRRVTVSPSCMNFLSSPVERRTGLVPFQDSSNMLPN 325
G GN+ P+ +PV R + + + RTG+ P + + P
Sbjct: 27 GFPGNALHYSAPDLPTTPVGTRSSTHLAELMTAWAQRSAHCANTRTGIAPLPEPPHRAPF 86
Query: 324 ESAASPLMVPEPSKSPGLR---LQPVIVCCASC 235
+ A+PL +P +R P +CC C
Sbjct: 87 KELATPLTCKQPPTLKLIRTRVFHPKGLCCGRC 119
>BC101782-1|AAI01783.1| 151|Homo sapiens hypothetical protein
LOC150538 protein.
Length = 151
Score = 32.3 bits (70), Expect = 1.1
Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
Frame = -3
Query: 504 GMAGNSFPSHLPNPILSPVALRQWPRRVTVSPSCMNFLSSPVERRTGLVPFQDSSNMLPN 325
G GN+ P+ +PV R + + + RTG+ P + + P
Sbjct: 27 GFPGNALHYSAPDLPTTPVGTRSSTHLAELMTAWAQRSAHCANTRTGIAPLPEPPHRAPF 86
Query: 324 ESAASPLMVPEPSKSPGLR---LQPVIVCCASC 235
+ A+PL +P +R P +CC C
Sbjct: 87 KELATPLTCKQPPTLKLIRTRVFHPKGLCCGRC 119
>AK056625-1|BAB71234.1| 151|Homo sapiens protein ( Homo sapiens
cDNA FLJ32063 fis, clone OCBBF1000067. ).
Length = 151
Score = 32.3 bits (70), Expect = 1.1
Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
Frame = -3
Query: 504 GMAGNSFPSHLPNPILSPVALRQWPRRVTVSPSCMNFLSSPVERRTGLVPFQDSSNMLPN 325
G GN+ P+ +PV R + + + RTG+ P + + P
Sbjct: 27 GFPGNALHYSAPDLPTTPVGTRSSTHLAELMTAWAQRSAHCANTRTGIAPLPEPPHRAPF 86
Query: 324 ESAASPLMVPEPSKSPGLR---LQPVIVCCASC 235
+ A+PL +P +R P +CC C
Sbjct: 87 KELATPLTCKQPPTLKLIRTRVFHPKGLCCGRC 119
>X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein.
Length = 1938
Score = 31.1 bits (67), Expect = 2.4
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = -3
Query: 477 HLPNPILSPVALRQWPRRVTVSPSCMNFLSSPVERRTGLVPFQDSSNMLPNES--AASPL 304
HLP L+P P + +C+N L+ V L+P + ++ P+ + A P+
Sbjct: 1614 HLPTEALAPADSLNDP---AIESNCLNELAGTVPSTVALLPSTATESLAPSNTFVAPQPV 1670
Query: 303 MVPEPSK 283
+V P+K
Sbjct: 1671 VVASPAK 1677
>M33907-1|AAA52672.1| 261|Homo sapiens HLA-DQB1 protein.
Length = 261
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI E V TVCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILEEDRASVDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>M26042-1|AAA36270.1| 261|Homo sapiens protein ( Human MHC class II
DQ beta mRNA, complete cds. ).
Length = 261
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI E V TVCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILEEDRASVDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>L34100-1|AAC41968.1| 229|Homo sapiens MHC class II HLA-DQ-beta-1
protein.
Length = 229
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI E V TVCR NY+ T Q+ + T+T R L + D + +
Sbjct: 66 DILEEDRASVDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 125
Query: 335 MLELSW 352
+++ W
Sbjct: 126 QIKVRW 131
>L34099-1|AAC41967.1| 229|Homo sapiens MHC class II HLA-DQ-beta-1
protein.
Length = 229
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI E V TVCR NY+ T Q+ + T+T R L + D + +
Sbjct: 66 DILEEDRASVDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 125
Query: 335 MLELSW 352
+++ W
Sbjct: 126 QIKVRW 131
>AY656683-1|AAV71030.1| 261|Homo sapiens MHC class II antigen
protein.
Length = 261
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI E V TVCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILEEDRASVDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>AY375863-1|AAQ88037.1| 234|Homo sapiens MHC class II antigen
protein.
Length = 234
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI E V TVCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILEEDRASVDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>AY375862-1|AAQ88036.1| 234|Homo sapiens MHC class II antigen
protein.
Length = 234
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI E V TVCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILEEDRASVDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>AY375861-1|AAQ88035.1| 227|Homo sapiens MHC class II antigen
protein.
Length = 227
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI E V TVCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILEEDRASVDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>AY375860-1|AAQ88034.1| 220|Homo sapiens MHC class II antigen
protein.
Length = 220
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI E V TVCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILEEDRASVDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>AK128338-1|BAC87390.1| 909|Homo sapiens protein ( Homo sapiens
cDNA FLJ46480 fis, clone THYMU3025683, weakly similar
to Ras interaction/interference protein 1. ).
Length = 909
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = -1
Query: 359 CPSRTVPTCSQTSLPPPR*WCPSRAS-----LPV*GCSPL*FAAPAAVSPSNTC 213
CP+R +P S + P R W P R LP+ CSP A++P+ C
Sbjct: 182 CPARPLPPTSDATSPTSR-WAPRRPPPPPPVLPLQPCSPAQPPVLPALAPAPAC 234
>AB081753-1|BAC16513.1| 985|Homo sapiens RIN3 protein.
Length = 985
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = -1
Query: 359 CPSRTVPTCSQTSLPPPR*WCPSRAS-----LPV*GCSPL*FAAPAAVSPSNTC 213
CP+R +P S + P R W P R LP+ CSP A++P+ C
Sbjct: 257 CPARPLPPTSDATSPTSR-WAPRRPPPPPPVLPLQPCSPAQPPVLPALAPAPAC 309
>Y08569-1|CAA69880.1| 1015|Homo sapiens Islet Cell Autoantigen
Releted protein.
Length = 1015
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 483 PSHLPNPILSPVALRQWP 430
PS +P P+L+P A ++WP
Sbjct: 272 PSRMPRPLLAPAAPQKWP 289
>U92032-1|AAB91991.1| 261|Homo sapiens MHC class II DQ-beta
protein.
Length = 261
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI K V VCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>U81561-1|AAB68603.1| 998|Homo sapiens protein tyrosine phosphatase
receptor pi protein.
Length = 998
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 483 PSHLPNPILSPVALRQWP 430
PS +P P+L+P A ++WP
Sbjct: 255 PSRMPRPLLAPAAPQKWP 272
>U66702-1|AAC50742.1| 1015|Homo sapiens phogrin protein.
Length = 1015
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 483 PSHLPNPILSPVALRQWP 430
PS +P P+L+P A ++WP
Sbjct: 272 PSRMPRPLLAPAAPQKWP 289
>U65065-1|AAC51643.1| 986|Homo sapiens tyrosine phosphatase
IA-2beta protein.
Length = 986
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 483 PSHLPNPILSPVALRQWP 430
PS +P P+L+P A ++WP
Sbjct: 272 PSRMPRPLLAPAAPQKWP 289
>M81141-1|AAA59772.1| 261|Homo sapiens lymphocyte antigen protein.
Length = 261
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI K V VCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>M81140-1|AAA59771.1| 261|Homo sapiens lymphocyte antigen protein.
Length = 261
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI K V VCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>M22403-1|AAA52596.1| 626|Homo sapiens platelet membrane
glycoprotein Ib-alpha protein.
Length = 626
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/65 (26%), Positives = 24/65 (36%)
Frame = -3
Query: 420 TVSPSCMNFLSSPVERRTGLVPFQDSSNMLPNESAASPLMVPEPSKSPGLRLQPVIVCCA 241
T SP+ + P T L P + P A PEP+ P + P I+ A
Sbjct: 383 TPSPTTSEPVPEPAPNMTTLEPTPSPTTPEPTSEPAPSPTTPEPTPIPTIATSPTILVSA 442
Query: 240 SCCFT 226
+ T
Sbjct: 443 TSLIT 447
>L40179-1|AAC41976.1| 229|Homo sapiens MHC class II HLA-DQ-beta-1
protein.
Length = 229
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI K V VCR NY+ T Q+ + T+T R L + D + +
Sbjct: 66 DILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 125
Query: 335 MLELSW 352
+++ W
Sbjct: 126 QIKVRW 131
>L34095-1|AAC41963.1| 229|Homo sapiens MHC class II HLA-DQ-beta-1
protein.
Length = 229
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI K V VCR NY+ T Q+ + T+T R L + D + +
Sbjct: 66 DILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 125
Query: 335 MLELSW 352
+++ W
Sbjct: 126 QIKVRW 131
>K02405-1|AAA75521.1| 261|Homo sapiens MHC HLA-DC3-beta protein.
Length = 261
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI K V VCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>J02940-1|AAA52595.1| 626|Homo sapiens GP1BA protein.
Length = 626
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/65 (26%), Positives = 24/65 (36%)
Frame = -3
Query: 420 TVSPSCMNFLSSPVERRTGLVPFQDSSNMLPNESAASPLMVPEPSKSPGLRLQPVIVCCA 241
T SP+ + P T L P + P A PEP+ P + P I+ A
Sbjct: 383 TPSPTTSEPVPEPAPNMTTLEPTPSPTTPEPTSEPAPSPTTPEPTPIPTIATSPTILVSA 442
Query: 240 SCCFT 226
+ T
Sbjct: 443 TSLIT 447
>J00198-1|AAA59788.1| 230|Homo sapiens HLA-DRB1 protein.
Length = 230
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI K V VCR NY+ T Q+ + T+T R L + D + +
Sbjct: 67 DILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 126
Query: 335 MLELSW 352
+++ W
Sbjct: 127 QIKVRW 132
>BC071570-1|AAH71570.1| 633|Homo sapiens PTPRN2 protein protein.
Length = 633
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 483 PSHLPNPILSPVALRQWP 430
PS +P P+L+P A ++WP
Sbjct: 234 PSRMPRPLLAPAAPQKWP 251
>BC034040-1|AAH34040.1| 986|Homo sapiens protein tyrosine
phosphatase, receptor type, N polypeptide 2 protein.
Length = 986
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 483 PSHLPNPILSPVALRQWP 430
PS +P P+L+P A ++WP
Sbjct: 272 PSRMPRPLLAPAAPQKWP 289
>BC027955-1|AAH27955.1| 626|Homo sapiens glycoprotein Ib
(platelet), alpha polypeptide protein.
Length = 626
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/65 (26%), Positives = 24/65 (36%)
Frame = -3
Query: 420 TVSPSCMNFLSSPVERRTGLVPFQDSSNMLPNESAASPLMVPEPSKSPGLRLQPVIVCCA 241
T SP+ + P T L P + P A PEP+ P + P I+ A
Sbjct: 383 TPSPTTSEPVPEPAPNMTTLEPTPSPTTPEPTSEPAPSPTTPEPTPIPTIATSPTILVSA 442
Query: 240 SCCFT 226
+ T
Sbjct: 443 TSLIT 447
>AY663407-1|AAU88012.1| 261|Homo sapiens MHC class II antigen
protein.
Length = 261
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI K V VCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>AY663399-1|AAU87991.1| 261|Homo sapiens MHC class II antigen
protein.
Length = 261
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI K V VCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>AY375844-1|AAQ88018.1| 234|Homo sapiens MHC class II antigen
protein.
Length = 234
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI K V VCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>AY375843-1|AAQ88017.1| 234|Homo sapiens MHC class II antigen
protein.
Length = 234
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI K V VCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>AY375842-1|AAQ88016.1| 234|Homo sapiens MHC class II antigen
protein.
Length = 234
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI K V VCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>AY333122-1|AAP93137.1| 183|Homo sapiens MHC class II HLA-DQ-beta
chain protein.
Length = 183
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI K V VCR NY+ T Q+ + T+T R L + D + +
Sbjct: 61 DILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 120
Query: 335 MLELSW 352
+++ W
Sbjct: 121 QIKVRW 126
>AL935026-3|CAI18446.1| 224|Homo sapiens major histocompatibility
complex, class II, DQ beta 1 protein.
Length = 224
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI K V VCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>AL935026-2|CAI18445.1| 261|Homo sapiens major histocompatibility
complex, class II, DQ beta 1 protein.
Length = 261
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI K V VCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>AL832450-1|CAD38626.1| 217|Homo sapiens hypothetical protein
protein.
Length = 217
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +3
Query: 186 PLFAVQTIGTCIGR*NSSWRSKL*RAATSDRETC---SARAPSAGRRQ 320
P + +G+C GR +SW + A R TC SA P AG Q
Sbjct: 49 PALCIWPLGSCPGRRPASWGRAMSHGAGLVRTTCSSGSALGPGAGAAQ 96
>AL731683-2|CAO03406.1| 261|Homo sapiens major histocompatibility
complex, class II, DQ beta 1 protein.
Length = 261
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 155 DIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISGEAADSFGS 334
DI K V VCR NY+ T Q+ + T+T R L + D + +
Sbjct: 98 DILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPA 157
Query: 335 MLELSW 352
+++ W
Sbjct: 158 QIKVRW 163
>AF395009-1|AAK71325.1| 626|Homo sapiens glycoprotein Ib
(platelet), alpha polypeptide protein.
Length = 626
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/65 (26%), Positives = 24/65 (36%)
Frame = -3
Query: 420 TVSPSCMNFLSSPVERRTGLVPFQDSSNMLPNESAASPLMVPEPSKSPGLRLQPVIVCCA 241
T SP+ + P T L P + P A PEP+ P + P I+ A
Sbjct: 383 TPSPTTSEPVPEPAPNMTTLEPTPSPTTPEPTSEPAPSPTTPEPTPIPTIATSPTILVSA 442
Query: 240 SCCFT 226
+ T
Sbjct: 443 TSLIT 447
>AF007555-1|AAB63600.1| 1015|Homo sapiens IAR/receptor-like
protein-tyrosine phosphatase precursor protein.
Length = 1015
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 483 PSHLPNPILSPVALRQWP 430
PS +P P+L+P A ++WP
Sbjct: 272 PSRMPRPLLAPAAPQKWP 289
>AB086948-1|BAC10305.1| 626|Homo sapiens platelet glycoprotein Ib
alpha protein.
Length = 626
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/65 (26%), Positives = 24/65 (36%)
Frame = -3
Query: 420 TVSPSCMNFLSSPVERRTGLVPFQDSSNMLPNESAASPLMVPEPSKSPGLRLQPVIVCCA 241
T SP+ + P T L P + P A PEP+ P + P I+ A
Sbjct: 383 TPSPTTSEPVPEPAPNMTTLEPTPSPTTPEPTSEPAPSPTTPEPTPIPTIATSPTILVSA 442
Query: 240 SCCFT 226
+ T
Sbjct: 443 TSLIT 447
>AB038516-1|BAB12038.1| 626|Homo sapiens platelet glycoprotein Ib
alpha protein.
Length = 626
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/65 (26%), Positives = 24/65 (36%)
Frame = -3
Query: 420 TVSPSCMNFLSSPVERRTGLVPFQDSSNMLPNESAASPLMVPEPSKSPGLRLQPVIVCCA 241
T SP+ + P T L P + P A PEP+ P + P I+ A
Sbjct: 383 TPSPTTSEPVPEPAPNMTTLEPTPSPTTPEPTSEPAPSPTTPEPTPIPTIATSPTILVSA 442
Query: 240 SCCFT 226
+ T
Sbjct: 443 TSLIT 447
>AB002385-1|BAA20841.2| 1042|Homo sapiens KIAA0387 protein.
Length = 1042
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 483 PSHLPNPILSPVALRQWP 430
PS +P P+L+P A ++WP
Sbjct: 299 PSRMPRPLLAPAAPQKWP 316
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,036,523
Number of Sequences: 237096
Number of extensions: 2064056
Number of successful extensions: 7170
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 6591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7159
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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