Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304G01f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81056-5|CAB02905.2|  307|Caenorhabditis elegans Hypothetical pr...    31   0.66 
AF036701-2|AAB88369.2|  625|Caenorhabditis elegans Hypothetical ...    29   2.7  
CU457741-13|CAM36354.1|  608|Caenorhabditis elegans Hypothetical...    28   3.5  
CU457741-11|CAM36352.1|  609|Caenorhabditis elegans Hypothetical...    28   3.5  
AF068201-1|AAC70927.1|  609|Caenorhabditis elegans aminopeptidas...    28   3.5  
AF068200-1|AAC72891.1|  609|Caenorhabditis elegans aminopeptidas...    28   3.5  

>Z81056-5|CAB02905.2|  307|Caenorhabditis elegans Hypothetical
           protein F09F3.7 protein.
          Length = 307

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -1

Query: 470 IENVK*LKFCSLHSSFIMGSNSPFWPKHTPFLDHDIQNLRYSLLLIM 330
           + N   L  C   S+F+M ++ PFW      L+  IQN+  +L +I+
Sbjct: 35  VTNFTKLCLCKAISNFVMSASFPFWIVPFSMLEFKIQNIPRTLNVIV 81


>AF036701-2|AAB88369.2|  625|Caenorhabditis elegans Hypothetical
           protein ZC416.6 protein.
          Length = 625

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +1

Query: 262 VVLGDRSFIHAQNSGIQFAHTPNIISNSEYRKFWIS 369
           ++ GDRS +      I  + + N+++NS +  FW++
Sbjct: 286 LIAGDRSLVSVIAHEIAHSWSGNLVTNSSWEHFWLN 321


>CU457741-13|CAM36354.1|  608|Caenorhabditis elegans Hypothetical
           protein C42C1.11c protein.
          Length = 608

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +1

Query: 262 VVLGDRSFIHAQNSGIQFAHTPNIISNSEYRKFWIS 369
           ++ GDRS ++     I  + T N+++N  +  FW++
Sbjct: 283 LLAGDRSLVNVIAHEISHSWTGNLVTNFSWEHFWLN 318


>CU457741-11|CAM36352.1|  609|Caenorhabditis elegans Hypothetical
           protein C42C1.11a protein.
          Length = 609

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +1

Query: 262 VVLGDRSFIHAQNSGIQFAHTPNIISNSEYRKFWIS 369
           ++ GDRS ++     I  + T N+++N  +  FW++
Sbjct: 284 LLAGDRSLVNVIAHEISHSWTGNLVTNFSWEHFWLN 319


>AF068201-1|AAC70927.1|  609|Caenorhabditis elegans aminopeptidase-1
           protein.
          Length = 609

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +1

Query: 262 VVLGDRSFIHAQNSGIQFAHTPNIISNSEYRKFWIS 369
           ++ GDRS ++     I  + T N+++N  +  FW++
Sbjct: 284 LLAGDRSLVNVIAHEISHSWTGNLVTNFSWEHFWLN 319


>AF068200-1|AAC72891.1|  609|Caenorhabditis elegans aminopeptidase-1
           protein.
          Length = 609

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +1

Query: 262 VVLGDRSFIHAQNSGIQFAHTPNIISNSEYRKFWIS 369
           ++ GDRS ++     I  + T N+++N  +  FW++
Sbjct: 284 LLAGDRSLVNVIAHEISHSWTGNLVTNFSWEHFWLN 319


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,270,667
Number of Sequences: 27780
Number of extensions: 218078
Number of successful extensions: 459
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)