Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304F11f
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 23 1.2
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 23 1.6
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 23 2.2
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 22 3.8
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 5.0
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 5.0
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 5.0
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 5.0
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 5.0
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 21 6.6
AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 21 8.7
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 23.4 bits (48), Expect = 1.2
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +1
Query: 412 LMCIFSCEHASLLWCCSSIPYSL 480
L+CI+ + LL+CC+ I +++
Sbjct: 255 LVCIYYFYYMHLLFCCAFIIFTM 277
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 23.0 bits (47), Expect = 1.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 137 TFRLSYYLFIKDRLILKSYTGTSNYLALLWQXHIQDLIYLKL 12
TFR + + L L ++ G + +LA+L Q + +LKL
Sbjct: 79 TFRTIANIILMAVLFLGTFIGRAKFLAILKQMRNLEPEFLKL 120
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.6 bits (46), Expect = 2.2
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3
Query: 126 QLLFIHQGQTDIKELHWHK 70
Q +F+ GQ ++HW K
Sbjct: 1339 QAMFLVVGQLQASQIHWQK 1357
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -1
Query: 461 EQHHKRLACSQLKMHIKVTLML 396
++H KRL C L ++ + L++
Sbjct: 127 KRHKKRLLCYLLARYVALALVI 148
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 21.8 bits (44), Expect = 3.8
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 292 IQTSHCTSYISG 257
++ SHC SY+ G
Sbjct: 244 VKLSHCNSYVDG 255
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 5.0
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = -1
Query: 311 IVLQWVHSNITLHQLHQW 258
+VL + H +H++ QW
Sbjct: 294 VVLNYHHRTADIHEMPQW 311
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.4 bits (43), Expect = 5.0
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = -1
Query: 311 IVLQWVHSNITLHQLHQW 258
+VL + H +H++ QW
Sbjct: 294 VVLNYHHRTADIHEMPQW 311
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.4 bits (43), Expect = 5.0
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = -1
Query: 311 IVLQWVHSNITLHQLHQW 258
+VL + H +H++ QW
Sbjct: 294 VVLNYHHRTADIHEMPQW 311
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 5.0
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = -1
Query: 311 IVLQWVHSNITLHQLHQW 258
+VL + H +H++ QW
Sbjct: 294 VVLNYHHRTADIHEMPQW 311
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.4 bits (43), Expect = 5.0
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = -1
Query: 311 IVLQWVHSNITLHQLHQW 258
+VL + H +H++ QW
Sbjct: 294 VVLNYHHRTADIHEMPQW 311
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 21.0 bits (42), Expect = 6.6
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +1
Query: 421 IFSCEHASLLWCCSS 465
I+ H ++LW C+S
Sbjct: 248 IYEMYHLAILWSCTS 262
>AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory receptor
candidate 3 protein.
Length = 398
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -1
Query: 461 EQHHKRLACSQLKMHIKVTLML 396
++H KRL C L ++ + L++
Sbjct: 145 KRHKKRLLCYLLARYVALALVI 166
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,919
Number of Sequences: 336
Number of extensions: 2261
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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