Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304F11f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 122 2e-28
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 66 1e-11
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 65 2e-11
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 63 1e-10
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 61 5e-10
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 56 2e-08
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 53 1e-07
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 50 1e-06
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 50 1e-06
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 49 2e-06
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 49 2e-06
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 48 4e-06
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 48 5e-06
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 48 5e-06
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 48 5e-06
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 46 1e-05
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 46 2e-05
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 46 2e-05
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 45 3e-05
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 45 3e-05
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 45 3e-05
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 44 5e-05
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 44 5e-05
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 44 5e-05
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 44 6e-05
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 44 6e-05
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 44 6e-05
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 44 8e-05
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 43 1e-04
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 43 1e-04
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 43 1e-04
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 43 1e-04
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 43 1e-04
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 42 3e-04
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 42 3e-04
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 42 3e-04
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 42 3e-04
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 42 3e-04
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 42 3e-04
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 42 3e-04
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 41 4e-04
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 41 4e-04
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 41 6e-04
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 41 6e-04
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 41 6e-04
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 41 6e-04
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 41 6e-04
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 40 8e-04
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 40 8e-04
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 40 8e-04
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 40 0.001
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 40 0.001
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 40 0.001
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 40 0.001
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 39 0.002
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 39 0.002
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 39 0.002
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 38 0.003
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 38 0.003
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 38 0.003
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 30 0.003
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 38 0.004
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 38 0.004
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 38 0.004
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 38 0.005
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 38 0.005
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 38 0.005
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 38 0.005
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 38 0.005
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 37 0.007
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 37 0.007
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 37 0.009
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 37 0.009
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 37 0.009
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 37 0.009
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 36 0.012
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 36 0.012
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 36 0.022
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 36 0.022
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 36 0.022
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 35 0.029
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 35 0.029
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 35 0.029
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 35 0.029
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 34 0.050
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 34 0.050
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 34 0.050
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 34 0.050
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 34 0.067
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 34 0.067
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 34 0.067
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 33 0.088
At3g56990.1 68416.m06344 glycine-rich protein conserved hypothet... 33 0.088
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 33 0.088
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 33 0.088
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 33 0.12
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 33 0.12
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 33 0.12
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 33 0.15
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 33 0.15
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 32 0.20
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 32 0.20
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 32 0.27
At5g57090.1 68418.m07128 auxin transport protein (EIR1) identica... 32 0.27
At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40... 32 0.27
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 32 0.27
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 31 0.36
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 31 0.36
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 31 0.36
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 31 0.36
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 31 0.36
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 31 0.47
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 31 0.47
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 31 0.47
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 31 0.47
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 31 0.47
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 31 0.62
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 30 0.82
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 30 1.1
At4g01530.1 68417.m00198 hypothetical protein 30 1.1
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 30 1.1
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 30 1.1
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 30 1.1
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 29 1.4
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 29 1.4
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 29 1.4
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 29 1.4
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 29 1.4
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 29 1.9
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 29 1.9
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 29 1.9
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 29 1.9
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 29 1.9
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 29 2.5
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 29 2.5
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 29 2.5
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 29 2.5
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 29 2.5
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 28 3.3
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 28 3.3
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 28 3.3
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 28 3.3
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 28 4.4
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 28 4.4
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 28 4.4
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 28 4.4
At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1 ... 27 5.8
At3g19960.1 68416.m02526 myosin (ATM) nearly identical to myosin... 27 5.8
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 27 5.8
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 27 5.8
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 27 5.8
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 27 7.7
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 27 7.7
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 27 7.7
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 122 bits (293), Expect = 2e-28
Identities = 68/171 (39%), Positives = 87/171 (50%), Gaps = 10/171 (5%)
Frame = -3
Query: 486 GP*GIWDTRAAPQKACMLTAENAHQSDINVISWNGKEP-FIASGGDDGFLHIWDLRQFTN 310
G +WD R A A NA D+NVISWN +ASG DDG I DLR
Sbjct: 292 GSVAVWDIRLGKSPALSFKAHNA---DVNVISWNRLASCMLASGSDDGTFSIRDLRLIKG 348
Query: 309 STPV-GTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW--------XXXXXXXXXXXX 157
V F++H P+TS+EW E S LA DNQ+ +W
Sbjct: 349 GDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLTIWDLSLEKDEEEEAEFNAQTKE 408
Query: 156 XXXXXKNLPPQLLFIHQGQTDIKELHWHKQLPGVIVAXAHTGFNIFKTISV 4
++LPPQLLF+HQGQ D+KELHWH Q+PG+I++ A GFNI ++
Sbjct: 409 LVNTPQDLPPQLLFVHQGQKDLKELHWHNQIPGMIISTAGDGFNILMPYNI 459
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -3
Query: 417 HQSDINVISWN-GKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTE 241
H + + + W+ +E AS DG + +WD+R +P +FK H A V + W
Sbjct: 268 HTASVEDLQWSPAEENVFASCSVDGSVAVWDIR--LGKSPALSFKAHNADVNVISWNRLA 325
Query: 240 PSVLASAGEDNQVAL 196
+LAS +D ++
Sbjct: 326 SCMLASGSDDGTFSI 340
Score = 40.3 bits (90), Expect = 8e-04
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = -3
Query: 423 NAHQSDINVISWN-GKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXW 247
+ H+ + I W+ + SG +H+W+ + + F HTA V ++W
Sbjct: 220 SGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSP 279
Query: 246 TEPSVLASAGEDNQVALW 193
E +V AS D VA+W
Sbjct: 280 AEENVFASCSVDGSVAVW 297
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 66.5 bits (155), Expect = 1e-11
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNG-KEPFIASGGDDGFLHIWDLRQFTNSTPV 298
IWDTR M H+ ++N +S+N E +A+ D + ++DLR+ + P+
Sbjct: 244 IWDTRTNQ----MQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKL--NAPL 297
Query: 297 GTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALWXXXXXXXXXXXXXXXXXKNLPPQLL 118
H V VEW +VLAS+GED ++ +W PP+LL
Sbjct: 298 HVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDG-PPELL 356
Query: 117 FIHQG-QTDIKELHWHKQLPGVIVAXA 40
F H G + I + W+K P VI + A
Sbjct: 357 FSHGGHKAKISDFAWNKNEPWVIASVA 383
Score = 46.8 bits (106), Expect = 9e-06
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Frame = -3
Query: 474 IWDTRAAPQKACM--LTAENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFTNST 304
+WD A PQ + + H+S I +SW+ K E S G+DG L IWD R TN
Sbjct: 195 LWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTR--TNQM 252
Query: 303 PVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
K H V + + VLA+A D+ VAL+
Sbjct: 253 Q-HQVKVHEREVNYLSFNPFNEWVLATASSDSTVALF 288
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Frame = -3
Query: 423 NAHQSDINVISWN-GKEPFIASGGDDGFLHIWDLRQF-----------TNSTPVGTFKH- 283
++H+ ++ + W+ E +AS G+D L +WDL + + P F H
Sbjct: 301 SSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHG 360
Query: 282 -HTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
H A ++ W EP V+AS EDN + +W
Sbjct: 361 GHKAKISDFAWNKNEPWVIASVAEDNSLQVW 391
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = -3
Query: 417 HQSDINVISWNG-KEPFIASGGDDGFLHIWDLRQFTNSTPVGT---FKHHTAPVTSVEWX 250
H + +SW+ KE ++ SG D + +WD+ + ++ H + + V W
Sbjct: 167 HDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWH 226
Query: 249 WTEPSVLASAGEDNQVALW 193
++ SAGED ++ +W
Sbjct: 227 MKNENLFGSAGEDGRLVIW 245
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 65.3 bits (152), Expect = 2e-11
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNG-KEPFIASGGDDGFLHIWDLRQFTNSTPV 298
IWD R M H+ +IN +S+N E +A+ D + ++DLR+ T P+
Sbjct: 245 IWDLRTNQ----MQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLT--APL 298
Query: 297 GTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALWXXXXXXXXXXXXXXXXXKNLPPQLL 118
H V VEW +VLAS+GED ++ +W PP+LL
Sbjct: 299 HVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDG-PPELL 357
Query: 117 FIHQG-QTDIKELHWHKQLPGVIVAXA 40
F H G + I + W+K P VI + A
Sbjct: 358 FSHGGHKAKISDFAWNKDEPWVISSVA 384
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = -3
Query: 417 HQSDINVISWNG-KEPFIASGGDDGFLHIWDLRQFTNS---TPVGTFKHHTAPVTSVEWX 250
H+ + ++W+ KE ++ SG D + +WD+ P+ ++ H + + V W
Sbjct: 168 HEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWH 227
Query: 249 WTEPSVLASAGEDNQVALW 193
++ SAG+D Q+ +W
Sbjct: 228 MKNENIFGSAGDDCQLVIW 246
Score = 41.1 bits (92), Expect = 4e-04
Identities = 32/97 (32%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = -3
Query: 474 IWDTRAAPQKACM--LTAENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFTNST 304
+WD A + + HQS I ++W+ K E S GDD L IWDLR TN
Sbjct: 196 LWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLR--TNQM 253
Query: 303 PVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
K H + + + VLA+A D+ VAL+
Sbjct: 254 Q-HQVKVHEREINYLSFNPFNEWVLATASSDSTVALF 289
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 63.3 bits (147), Expect = 1e-10
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 5/148 (3%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEP-FIASGGDDGFLHIWDLRQFTNS--- 307
+WD R A + E AH +D++ + WN + I +G D + ++D R T++
Sbjct: 308 LWDARTGTSPA--MKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVG 365
Query: 306 TPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALWXXXXXXXXXXXXXXXXXKNLPP 127
+PV F+ H A V V+W + SV S+ ED + +W P
Sbjct: 366 SPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIW-----DCDRVGKKSERATKTPD 420
Query: 126 QLLFIHQGQTD-IKELHWHKQLPGVIVA 46
L F H G D + + HW P IV+
Sbjct: 421 GLFFQHAGHRDKVVDFHWSLLNPWTIVS 448
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -3
Query: 423 NAHQSDINVISW--NGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWX 250
N H+ + +++ + + F S GDD L +WD R T S + K H A + V+W
Sbjct: 278 NGHKDTVEDVAFCPSSAQEF-CSVGDDSCLMLWDARTGT-SPAMKVEKAHDADLHCVDWN 335
Query: 249 WTEPSVLASAGEDNQVALW 193
+ +++ + DN V ++
Sbjct: 336 PHDNNLILTGSADNTVRVF 354
Score = 30.3 bits (65), Expect(2) = 0.077
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENA--------HQSDIN-VISWNGKEPFIASGGDDGFLHIWDLR 322
IW+T P + +L A ++ HQ D ++ EPF+ SGG D + +W+++
Sbjct: 180 IWNTETQPDRYAVLGAPDSRPDLLLIGHQDDAEFALAMCPTEPFVLSGGKDKSVILWNIQ 239
Score = 22.2 bits (45), Expect(2) = 0.077
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = -3
Query: 303 PVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
P G + H V V + + S G+D+ + LW
Sbjct: 273 PRGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLW 309
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 60.9 bits (141), Expect = 5e-10
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 5/148 (3%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEP-FIASGGDDGFLHIWDLRQFTNS--- 307
+WD R + E AH +D++ + WN + I +G D + ++D R+ T +
Sbjct: 319 LWDARTGTNPVTKV--EKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVG 376
Query: 306 TPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALWXXXXXXXXXXXXXXXXXKNLPP 127
+P+ F+ H A V V+W + SV S+ ED + +W P
Sbjct: 377 SPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIW-----DYDRVSKKSDRAAKSPA 431
Query: 126 QLLFIHQGQTD-IKELHWHKQLPGVIVA 46
L F H G D + + HW+ P IV+
Sbjct: 432 GLFFQHAGHRDKVVDFHWNASDPWTIVS 459
Score = 34.3 bits (75), Expect = 0.050
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = -3
Query: 363 SGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
S GDD L +WD R TN K H A + V+W + +++ + DN V L+
Sbjct: 310 SVGDDSCLILWDARTGTNPV-TKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLF 365
Score = 31.5 bits (68), Expect(2) = 0.012
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENA--------HQSDIN-VISWNGKEPFIASGGDDGFLHIWDLR 322
IWD P + +L A N+ HQ + ++ EPF+ SGG D + +W ++
Sbjct: 191 IWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQ 250
Query: 321 QFTNSTPVGT 292
+ T +GT
Sbjct: 251 D--HITTIGT 258
Score = 23.8 bits (49), Expect(2) = 0.012
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = -3
Query: 303 PVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
P G + H V V + T S G+D+ + LW
Sbjct: 284 PRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILW 320
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 55.6 bits (128), Expect = 2e-08
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNG-KEPFIASGGDDGFLHIWDLRQFTNSTPV 298
IWD R+ P + + + AH ++N +++N E +A+G D + ++DLR+ ST +
Sbjct: 254 IWDLRS-PSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKL--STAL 310
Query: 297 GTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALWXXXXXXXXXXXXXXXXXKNLPPQLL 118
TF H V V W ++LAS ++ +W PP+LL
Sbjct: 311 HTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDG---PPELL 367
Query: 117 FIHQGQTD-IKELHWH 73
FIH G T I + W+
Sbjct: 368 FIHGGHTSKISDFSWN 383
Score = 47.6 bits (108), Expect = 5e-06
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAE--NAHQSDINVISWNGKEPFI-ASGGDDGFLHIWDLRQFTNST 304
+WD A P+ + + AH+ + ++W+ + ++ S GDD +L IWDLR + S
Sbjct: 205 LWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASK 264
Query: 303 PVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
PV + H+ V + + V+A+ D V L+
Sbjct: 265 PVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLF 301
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = -3
Query: 417 HQSDINVISWNG-KEPFIASGGDDGFLHIWDLRQFTNSTPVGT---FKHHTAPVTSVEWX 250
H S+ +SW+ K+ + SG DD + +WD+ + + FK H V V W
Sbjct: 177 HSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWH 236
Query: 249 WTEPSVLASAGEDNQVALW 193
+ S G+D + +W
Sbjct: 237 LRHEYLFGSVGDDQYLLIW 255
Score = 35.1 bits (77), Expect = 0.029
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Frame = -3
Query: 423 NAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFT---------NSTPVGTFKH--H 280
++H+ ++ + WN K E +AS L +WDL + + P F H H
Sbjct: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHGGH 373
Query: 279 TAPVTSVEWXWTEPSVLASAGEDNQVALW 193
T+ ++ W E V++S EDN + +W
Sbjct: 374 TSKISDFSWNPCEDWVISSVAEDNILQIW 402
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 52.8 bits (121), Expect = 1e-07
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTP----VGTFKHHTAPVTSVEWX 250
H ++ + W+ +ASGG+D +HIWD R +S P + F+ HTA V ++ W
Sbjct: 217 HTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWC 276
Query: 249 WTEPSVLASAG--EDNQVALW 193
+ S+LA+ G D ++ W
Sbjct: 277 PFQASLLATGGGVGDGKIKFW 297
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = -3
Query: 372 FIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
FIASG +D ++IW+L+ N+ P+ H+ V V W P +LASA +D + +W
Sbjct: 457 FIASGSEDSQVYIWNLK---NTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 33.5 bits (73), Expect = 0.088
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 423 NAHQSDINVISWNGKEP-FIASGGDDGFLHIW 331
+ H +N +SWN K P +AS DD + IW
Sbjct: 482 SGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 30.7 bits (66), Expect = 0.62
Identities = 16/76 (21%), Positives = 33/76 (43%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTE 241
AH++++ + ++ ++A+ D IW + T + H PV+ V W +
Sbjct: 222 AHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWS-PD 280
Query: 240 PSVLASAGEDNQVALW 193
+ L + G + LW
Sbjct: 281 DTKLLTCGNAEVLKLW 296
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTP----VGTFKHHTAPVTSVEWX 250
H ++ + W+ +ASGG+D +HIWD R +S P + F+ HTA V ++ W
Sbjct: 235 HTEEVCGLKWSESGKKLASGGNDNVVHIWD-RSLASSNPTRQWLHRFEEHTAAVRALAWC 293
Query: 249 WTEPSVLASAG--EDNQVALW 193
+ S+LA+ G D ++ W
Sbjct: 294 PFQASLLATGGGVGDGKINFW 314
Score = 45.2 bits (102), Expect = 3e-05
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = -3
Query: 432 TAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 253
T H+S + ++WN + +GG DG + D+R S+ +GT+ HT V ++W
Sbjct: 189 TLRGGHESRVGSLAWNNH--ILTTGGMDGKIVNNDVR--IRSSIIGTYVGHTEEVCGLKW 244
Query: 252 XWTEPSVLASAGEDNQVALW 193
LAS G DN V +W
Sbjct: 245 S-ESGKKLASGGNDNVVHIW 263
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 48.8 bits (111), Expect = 2e-06
Identities = 30/94 (31%), Positives = 48/94 (51%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WD+ + Q + T + HQS + ++WN + +GG DG + D+R S V
Sbjct: 208 LWDSASNRQ---LRTLKGGHQSRVGSLAWNNH--ILTTGGMDGLIINNDVR--IRSPIVE 260
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
T++ HT V ++W + LAS G DN V +W
Sbjct: 261 TYRGHTQEVCGLKWSGSGQQ-LASGGNDNVVHIW 293
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLR-QFTNSTP--VGTFKHHTAPVTSVEWXW 247
H ++ + W+G +ASGG+D +HIWD +NST + + HT+ V ++ W
Sbjct: 265 HTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCP 324
Query: 246 TEPSVLAS--AGEDNQVALW 193
+ ++LA+ G D + W
Sbjct: 325 FQANLLATGGGGGDRTIKFW 344
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 48.8 bits (111), Expect = 2e-06
Identities = 30/94 (31%), Positives = 48/94 (51%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WD+ + Q + T + HQS + ++WN + +GG DG + D+R S V
Sbjct: 198 LWDSASNRQ---LRTLKGGHQSRVGSLAWNNH--ILTTGGMDGLIINNDVR--IRSPIVE 250
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
T++ HT V ++W + LAS G DN V +W
Sbjct: 251 TYRGHTQEVCGLKWSGSGQQ-LASGGNDNVVHIW 283
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLR-QFTNSTP--VGTFKHHTAPVTSVEWXW 247
H ++ + W+G +ASGG+D +HIWD +NST + + HT+ V ++ W
Sbjct: 255 HTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCP 314
Query: 246 TEPSVLAS--AGEDNQVALW 193
+ ++LA+ G D + W
Sbjct: 315 FQANLLATGGGGGDRTIKFW 334
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 48.0 bits (109), Expect = 4e-06
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEP 238
HQ ++N + W+ +AS DD IW+++Q ST V + HT + ++ W T P
Sbjct: 447 HQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQ---STFVHDLREHTKEIYTIRWSPTGP 503
Query: 237 S--------VLASAGEDNQVALW 193
LASA D+ V LW
Sbjct: 504 GTNNPNKQLTLASASFDSTVKLW 526
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/77 (27%), Positives = 33/77 (42%)
Frame = -3
Query: 423 NAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWT 244
N D+ + WNG+ +A+G DG IW L N + T H P+ S++W
Sbjct: 321 NEKSKDVTTLDWNGEGTLLATGSCDGQARIWTL----NGELISTLSKHKGPIFSLKWN-K 375
Query: 243 EPSVLASAGEDNQVALW 193
+ L + D +W
Sbjct: 376 KGDYLLTGSVDRTAVVW 392
Score = 31.9 bits (69), Expect = 0.27
Identities = 14/62 (22%), Positives = 29/62 (46%)
Frame = -3
Query: 438 MLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSV 259
+++ + H+ I + WN K ++ +G D +WD++ F+ H+ P V
Sbjct: 357 LISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKA---EEWKQQFEFHSGPTLDV 413
Query: 258 EW 253
+W
Sbjct: 414 DW 415
Score = 31.9 bits (69), Expect = 0.27
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -3
Query: 438 MLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 319
ML + N H+ + ++++ +IASG D +HIW +++
Sbjct: 533 MLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKE 572
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFK 286
H S++ +W+ +ASG D IW S P G+FK
Sbjct: 264 HTSEVCACAWSPSASLLASGSGDATARIW-------SIPEGSFK 300
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 47.6 bits (108), Expect = 5e-06
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTP----VGTFKHHTAPVTSVEWX 250
H ++ + W+ +ASGG+ +HIWD R +S P + F+ HTA V ++ W
Sbjct: 248 HTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAWC 307
Query: 249 WTEPSVLASAG--EDNQVALW 193
+ ++LA+ G D ++ W
Sbjct: 308 PFQATLLATGGGVGDGKIKFW 328
Score = 40.7 bits (91), Expect = 6e-04
Identities = 26/80 (32%), Positives = 39/80 (48%)
Frame = -3
Query: 432 TAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 253
T H+S + ++WN + +GG DG + D+R S+ VGT+ HT V ++W
Sbjct: 202 TLIGGHESRVGSLAWNNH--ILTTGGMDGKIVNNDVR--IRSSIVGTYLGHTEEVCGLKW 257
Query: 252 XWTEPSVLASAGEDNQVALW 193
LAS G N V +W
Sbjct: 258 S-ESGKKLASGGNYNVVHIW 276
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 47.6 bits (108), Expect = 5e-06
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -3
Query: 405 INVISWNGKEP-FIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVL 229
+N + G+ IA+GG D L +WD R+ S PV F H++ +++ +W + L
Sbjct: 315 LNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHL 374
Query: 228 ASAGEDNQVALW 193
SA D ++ LW
Sbjct: 375 LSASYDGKIMLW 386
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 47.6 bits (108), Expect = 5e-06
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -3
Query: 405 INVISWNGKEP-FIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVL 229
+N + G+ IA+GG D L +WD R+ S PV F H++ +++ +W + L
Sbjct: 315 LNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHL 374
Query: 228 ASAGEDNQVALW 193
SA D ++ LW
Sbjct: 375 LSASYDGKIMLW 386
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/98 (27%), Positives = 44/98 (44%)
Frame = -3
Query: 486 GP*GIWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNS 307
G GIW + + C+ T E H++++ +SWN +A+ D + IW++ +
Sbjct: 96 GTTGIWKNYGS-EFECISTLEG-HENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEY 153
Query: 306 TPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
HT V V+W T VL S DN + +W
Sbjct: 154 DCAAVLTGHTQDVKMVQWHPT-MDVLFSCSYDNTIKVW 190
Score = 37.9 bits (84), Expect = 0.004
Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Frame = -3
Query: 474 IWDTRAAPQK-ACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPV 298
IW+ + + C E H + +W+ +A+ DG IW + +
Sbjct: 53 IWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWK-NYGSEFECI 111
Query: 297 GTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
T + H V SV W S LA+ D V +W
Sbjct: 112 STLEGHENEVKSVSWN-ASGSCLATCSRDKSVWIW 145
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -3
Query: 468 DTRAAPQKACMLTAENAHQSDINVISWNGKE--PFIASGGDDGFLHIWDL 325
D+ P +L AH++D+N + W+ E +AS DDG + IW L
Sbjct: 299 DSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQL 348
Score = 31.1 bits (67), Expect = 0.47
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Frame = -3
Query: 438 MLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIW-DLRQFTNSTPVGTF-----KHHT 277
+ T H I W+ ++ IASG D + ++ D + + P K H
Sbjct: 259 LCTLSGYHDRTIYSAHWS-RDDIIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHE 317
Query: 276 APVTSVEWXWTEPS-VLASAGEDNQVALW 193
V SV+W E + +LASA +D V +W
Sbjct: 318 NDVNSVQWSPGEGNRLLASASDDGMVKIW 346
Score = 27.1 bits (57), Expect = 7.7
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Frame = -3
Query: 429 AENAHQSDINVISWNGKEPFIASGGDDGFLHIW--DLRQFTNSTPVGTFKH-------HT 277
+ N H S + IS+N + + DD L IW D+ + + + H H
Sbjct: 208 SNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHD 267
Query: 276 APVTSVEWXWTEPSVLASAGEDNQVALW 193
+ S W+ ++AS DN + L+
Sbjct: 268 RTIYSAH--WSRDDIIASGAGDNAIRLF 293
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/94 (30%), Positives = 47/94 (50%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WDTR +K C+ T + H I+ I ++ ++ SGG D + +WDL T +
Sbjct: 75 VWDTR---KKGCIQTYKG-HTRGISTIEFSPDGRWVVSGGLDNVVKVWDL---TAGKLLH 127
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
FK H P+ S+++ E +LA+ D V W
Sbjct: 128 EFKCHEGPIRSLDFHPLE-FLLATGSADRTVKFW 160
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/94 (27%), Positives = 50/94 (53%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WD +++ M+ A H+S+ + + ++ F+ASG D L +WD R+ +
Sbjct: 33 LWDL----EESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRK---KGCIQ 85
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
T+K HT ++++E+ + + S G DN V +W
Sbjct: 86 TYKGHTRGISTIEFS-PDGRWVVSGGLDNVVKVW 118
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/94 (27%), Positives = 50/94 (53%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WD ++A M+ A H+S+ + + ++ F+ASG D L IWD+R+ +
Sbjct: 84 LWDV----EEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRK---KGCIQ 136
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
T+K H+ ++++ + + + S G DN V +W
Sbjct: 137 TYKGHSRGISTIRFT-PDGRWVVSGGLDNVVKVW 169
Score = 44.4 bits (100), Expect = 5e-05
Identities = 29/94 (30%), Positives = 45/94 (47%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
IWD R +K C+ T + H I+ I + ++ SGG D + +WDL T +
Sbjct: 126 IWDIR---KKGCIQTYKG-HSRGISTIRFTPDGRWVVSGGLDNVVKVWDL---TAGKLLH 178
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
FK H P+ S+++ E +LA+ D V W
Sbjct: 179 EFKFHEGPIRSLDFHPLE-FLLATGSADRTVKFW 211
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/94 (29%), Positives = 46/94 (48%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
IWD R +K C+ T + H +NV+ + ++ SGG+D + +WDL T +
Sbjct: 127 IWDIR---KKGCIHTYKG-HTRGVNVLRFTPDGRWVVSGGEDNIVKVWDL---TAGKLLT 179
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
FK H + S+++ E +LA+ D V W
Sbjct: 180 EFKSHEGQIQSLDFHPHE-FLLATGSADRTVKFW 212
Score = 38.7 bits (86), Expect = 0.002
Identities = 27/94 (28%), Positives = 46/94 (48%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WD ++A ++ H+S+ + ++ F ASG D L IWD+R+ +
Sbjct: 85 LWDL----EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK---KGCIH 137
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
T+K HT V + + + + S GEDN V +W
Sbjct: 138 TYKGHTRGVNVLRFT-PDGRWVVSGGEDNIVKVW 170
Score = 32.7 bits (71), Expect = 0.15
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEP 238
H S I+ ++++ E +A+G G + +WDL + + V T H + SV++
Sbjct: 58 HSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE---AKIVRTLTGHRSNCISVDFH-PFG 113
Query: 237 SVLASAGEDNQVALW 193
AS D + +W
Sbjct: 114 EFFASGSLDTNLKIW 128
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/94 (29%), Positives = 46/94 (48%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
IWD R +K C+ T + H +NV+ + ++ SGG+D + +WDL T +
Sbjct: 127 IWDIR---KKGCIHTYKG-HTRGVNVLRFTPDGRWVVSGGEDNIVKVWDL---TAGKLLT 179
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
FK H + S+++ E +LA+ D V W
Sbjct: 180 EFKSHEGQIQSLDFHPHE-FLLATGSADRTVKFW 212
Score = 38.7 bits (86), Expect = 0.002
Identities = 27/94 (28%), Positives = 46/94 (48%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WD ++A ++ H+S+ + ++ F ASG D L IWD+R+ +
Sbjct: 85 LWDL----EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK---KGCIH 137
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
T+K HT V + + + + S GEDN V +W
Sbjct: 138 TYKGHTRGVNVLRFT-PDGRWVVSGGEDNIVKVW 170
Score = 32.7 bits (71), Expect = 0.15
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEP 238
H S I+ ++++ E +A+G G + +WDL + + V T H + SV++
Sbjct: 58 HSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE---AKIVRTLTGHRSNCISVDFH-PFG 113
Query: 237 SVLASAGEDNQVALW 193
AS D + +W
Sbjct: 114 EFFASGSLDTNLKIW 128
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 45.2 bits (102), Expect = 3e-05
Identities = 29/94 (30%), Positives = 46/94 (48%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
IWD R +K C+ T + H +NV+ + +I SGG+D + +WDL T +
Sbjct: 220 IWDIR---KKGCIHTYKG-HTRGVNVLRFTPDGRWIVSGGEDNVVKVWDL---TAGKLLH 272
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
FK H + S+++ E +LA+ D V W
Sbjct: 273 EFKSHEGKIQSLDFHPHE-FLLATGSADKTVKFW 305
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/94 (28%), Positives = 47/94 (50%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WD ++A ++ H+S+ ++++ F ASG D L IWD+R+ +
Sbjct: 178 LWDL----EEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK---KGCIH 230
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
T+K HT V + + + + S GEDN V +W
Sbjct: 231 TYKGHTRGVNVLRFT-PDGRWIVSGGEDNVVKVW 263
Score = 32.7 bits (71), Expect = 0.15
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEP 238
H S I+ ++++ E +A+G G + +WDL + + V T H + SV +
Sbjct: 151 HSSGIDSVTFDASEGLVAAGAASGTIKLWDLEE---AKVVRTLTGHRSNCVSVNFH-PFG 206
Query: 237 SVLASAGEDNQVALW 193
AS D + +W
Sbjct: 207 EFFASGSLDTNLKIW 221
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 44.4 bits (100), Expect = 5e-05
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEP 238
H+S++ + W+ + +ASGG+D L +W+ + P+ HTA V ++ W +
Sbjct: 297 HKSEVCGLKWSHDDRELASGGNDNQLLVWNNH---SQQPILKLTEHTAAVKAITWSPHQS 353
Query: 237 SVLASAG--EDNQVALW 193
S+LAS G D + W
Sbjct: 354 SLLASGGGTADRCIRFW 370
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = -3
Query: 426 ENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWX 250
E A +S ++ I WN + +AS +G + +WD+ + + V K H V S+++
Sbjct: 529 ELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVAR---NQLVTEMKEHEKRVWSIDYS 585
Query: 249 WTEPSVLASAGEDNQVALW 193
+P++LAS +D V LW
Sbjct: 586 SADPTLLASGSDDGSVKLW 604
Score = 32.3 bits (70), Expect = 0.20
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = -3
Query: 438 MLTAENAHQSDINVISWNGKEP-FIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTS 262
++T H+ + I ++ +P +ASG DDG + +W + Q +GT K A +
Sbjct: 568 LVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ---GVSIGTIK-TKANICC 623
Query: 261 VEWXWTEPSVLASAGEDNQV 202
V++ LA D++V
Sbjct: 624 VQFPSETGRSLAFGSADHKV 643
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = -3
Query: 426 ENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWX 250
E A +S ++ I WN + +AS +G + +WD+ + + V K H V S+++
Sbjct: 529 ELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVAR---NQLVTEMKEHEKRVWSIDYS 585
Query: 249 WTEPSVLASAGEDNQVALW 193
+P++LAS +D V LW
Sbjct: 586 SADPTLLASGSDDGSVKLW 604
Score = 32.3 bits (70), Expect = 0.20
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = -3
Query: 438 MLTAENAHQSDINVISWNGKEP-FIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTS 262
++T H+ + I ++ +P +ASG DDG + +W + Q +GT K A +
Sbjct: 568 LVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ---GVSIGTIK-TKANICC 623
Query: 261 VEWXWTEPSVLASAGEDNQV 202
V++ LA D++V
Sbjct: 624 VQFPSETGRSLAFGSADHKV 643
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 44.0 bits (99), Expect = 6e-05
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTP----VGTFKHHTAPVTSVEWX 250
H ++ + W+ ASGG+D +HIWD R +S + F+ HTA V ++ W
Sbjct: 251 HTEEVCGLKWSESGNKQASGGNDNVVHIWD-RSLASSKQTRQWLHRFEEHTAAVRALAWC 309
Query: 249 WTEPSVLASAG--EDNQVALW 193
+ S+LA+ G D ++ W
Sbjct: 310 PFQASLLATGGGVGDGKIKFW 330
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 44.0 bits (99), Expect = 6e-05
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGK---EPFIASGGDDG-FLHIWDLRQFTNS 307
IWD R QK + A++ + +V+ WN + +AS D L +WD+R +
Sbjct: 199 IWDLRK--QKPIINFADSVRRR-CSVLQWNPNVTTQIMVASDDDSSPTLKLWDMRNIMS- 254
Query: 306 TPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALWXXXXXXXXXXXXXXXXXKNLPP 127
PV F H V ++EW ++ S L + +DN+ W N
Sbjct: 255 -PVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICW----------------DTNTAE 297
Query: 126 QLLFIHQGQTDIKELHWHKQLPGVIVAXAHTG 31
+ + G ++HW+ ++PGVI A + G
Sbjct: 298 IVAELPAGNNWNFDVHWYPKIPGVISASSFDG 329
Score = 36.7 bits (81), Expect = 0.009
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 13/94 (13%)
Frame = -3
Query: 435 LTAENAHQSDINVISW----NGKEPF----IASGGDDGFLHIWDLRQFTNSTP-----VG 295
L E N ++W +G E F IA G DG + +W+ S P VG
Sbjct: 57 LVGEIPSSERFNRLAWGRNGSGSEEFALGLIAGGLVDGNIDLWNPLSLIGSQPSENALVG 116
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
H PV +E+ ++LAS +D ++ +W
Sbjct: 117 HLSVHKGPVRGLEFNAISSNLLASGADDGEICIW 150
Score = 33.1 bits (72), Expect = 0.12
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Frame = -3
Query: 453 PQKACMLTAENAHQSDINVISWNG-KEPFIASGGDDGFLHIWDLRQFTNST--PV--GTF 289
P + ++ + H+ + + +N +ASG DDG + IWDL + + + P+ G+
Sbjct: 109 PSENALVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSG 168
Query: 288 KHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
++ + W +LAS + +W
Sbjct: 169 SATQGEISFISWNRKVQQILASTSYNGTTVIW 200
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 44.0 bits (99), Expect = 6e-05
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGK---EPFIASGGDDG-FLHIWDLRQFTNS 307
IWD R QK + A++ + +V+ WN + +AS D L +WD+R +
Sbjct: 199 IWDLRK--QKPIINFADSVRRR-CSVLQWNPNVTTQIMVASDDDSSPTLKLWDMRNIMS- 254
Query: 306 TPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALWXXXXXXXXXXXXXXXXXKNLPP 127
PV F H V ++EW ++ S L + +DN+ W N
Sbjct: 255 -PVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICW----------------DTNTAE 297
Query: 126 QLLFIHQGQTDIKELHWHKQLPGVIVAXAHTG 31
+ + G ++HW+ ++PGVI A + G
Sbjct: 298 IVAELPAGNNWNFDVHWYPKIPGVISASSFDG 329
Score = 36.7 bits (81), Expect = 0.009
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 13/94 (13%)
Frame = -3
Query: 435 LTAENAHQSDINVISW----NGKEPF----IASGGDDGFLHIWDLRQFTNSTP-----VG 295
L E N ++W +G E F IA G DG + +W+ S P VG
Sbjct: 57 LVGEIPSSERFNRLAWGRNGSGSEEFALGLIAGGLVDGNIDLWNPLSLIGSQPSENALVG 116
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
H PV +E+ ++LAS +D ++ +W
Sbjct: 117 HLSVHKGPVRGLEFNAISSNLLASGADDGEICIW 150
Score = 33.1 bits (72), Expect = 0.12
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Frame = -3
Query: 453 PQKACMLTAENAHQSDINVISWNG-KEPFIASGGDDGFLHIWDLRQFTNST--PV--GTF 289
P + ++ + H+ + + +N +ASG DDG + IWDL + + + P+ G+
Sbjct: 109 PSENALVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSG 168
Query: 288 KHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
++ + W +LAS + +W
Sbjct: 169 SATQGEISFISWNRKVQQILASTSYNGTTVIW 200
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 43.6 bits (98), Expect = 8e-05
Identities = 22/94 (23%), Positives = 43/94 (45%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WDTR+ ++ C L + H++ + + WN ++ + D + ++D+R +
Sbjct: 294 LWDTRSG-RELCSL---HGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKE---LQ 346
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
+F+ HT VTS+ W S D + W
Sbjct: 347 SFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHW 380
Score = 33.9 bits (74), Expect = 0.067
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEP 238
H D+ + W+ + + SGG D + +WD R + + + H V SV+W
Sbjct: 267 HGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTR---SGRELCSLHGHKNIVLSVKWN-QNG 322
Query: 237 SVLASAGEDNQVALW 193
+ L +A +D + L+
Sbjct: 323 NWLLTASKDQIIKLY 337
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEP 238
H+S++ + W+ +ASGG+D L +W+ ++ PV + HTA V ++ W
Sbjct: 334 HKSEVCGLKWSYDNRELASGGNDNRLFVWNQH---STQPVLKYSEHTAAVKAIAWSPHVH 390
Query: 237 SVLASAG--EDNQVALW 193
+LAS G D + W
Sbjct: 391 GLLASGGGTADRCIRFW 407
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/82 (26%), Positives = 40/82 (48%)
Frame = -3
Query: 438 MLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSV 259
MLT + + +S++ K P+I + G + +WD R T + F H PV V
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRM---GTLIDRFDEHEGPVRGV 57
Query: 258 EWXWTEPSVLASAGEDNQVALW 193
+ ++P + S G+D ++ +W
Sbjct: 58 HFHNSQP-LFVSGGDDYKIKVW 78
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEP 238
H +N S++ P I SG DD + +W + + T + V T + H V+SV + +
Sbjct: 203 HDRGVNWASFHPTLPLIVSGADDRQVKLWRMNE-TKAWEVDTLRGHMNNVSSVMFH-AKQ 260
Query: 237 SVLASAGEDNQVALW 193
++ S ED + +W
Sbjct: 261 DIIVSNSEDKSIRVW 275
Score = 35.5 bits (78), Expect = 0.022
Identities = 19/94 (20%), Positives = 43/94 (45%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WD R ++ + H+ + + ++ +P SGGDD + +W+ + +
Sbjct: 35 LWDYRMGT----LIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWN---YKTHRCLF 87
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
T H + +V++ P ++ SA +D + +W
Sbjct: 88 TLLGHLDYIRTVQFHHENPWIV-SASDDQTIRIW 120
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/83 (24%), Positives = 35/83 (42%)
Frame = -3
Query: 441 CMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTS 262
C+ T H I + ++ + P+I S DD + IW+ + + T + H V
Sbjct: 85 CLFTLLG-HLDYIRTVQFHHENPWIVSASDDQTIRIWN---WQSRTCISVLTGHNHYVMC 140
Query: 261 VEWXWTEPSVLASAGEDNQVALW 193
+ E ++ SA D V +W
Sbjct: 141 ASFHPKE-DLVVSASLDQTVRVW 162
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/82 (26%), Positives = 40/82 (48%)
Frame = -3
Query: 438 MLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSV 259
MLT + + +S++ K P+I + G + +WD R T + F H PV V
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRM---GTLIDRFDEHEGPVRGV 57
Query: 258 EWXWTEPSVLASAGEDNQVALW 193
+ ++P + S G+D ++ +W
Sbjct: 58 HFHNSQP-LFVSGGDDYKIKVW 78
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEP 238
H +N +++ P I SG DD + +W + + T + V T + H V+SV + +
Sbjct: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE-TKAWEVDTLRGHMNNVSSVMFH-AKQ 260
Query: 237 SVLASAGEDNQVALW 193
++ S ED + +W
Sbjct: 261 DIIVSNSEDKSIRVW 275
Score = 37.1 bits (82), Expect = 0.007
Identities = 20/94 (21%), Positives = 44/94 (46%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WD R ++ + H+ + + ++ +P SGGDD + +W+ + N +
Sbjct: 35 LWDYRMGT----LIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWN---YKNHRCLF 87
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
T H + +V++ P ++ SA +D + +W
Sbjct: 88 TLLGHLDYIRTVQFHHEYPWIV-SASDDQTIRIW 120
Score = 28.7 bits (61), Expect = 2.5
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = -3
Query: 441 CMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTS 262
C+ T H I + ++ + P+I S DD + IW+ + + T V H V
Sbjct: 85 CLFTLLG-HLDYIRTVQFHHEYPWIVSASDDQTIRIWN---WQSRTCVSVLTGHNHYVMC 140
Query: 261 VEWXWTEPSVLASAGEDNQVALW 193
+ E ++ SA D V +W
Sbjct: 141 ASFHPKE-DLVVSASLDQTVRVW 162
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 42.7 bits (96), Expect = 1e-04
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEP 238
H+S+I + W+ +ASGG+D L +W+ ++ PV F H A V ++ W
Sbjct: 291 HKSEICGLKWSSDNRELASGGNDNKLFVWNQH---STQPVLRFCEHAAAVKAIAWSPHHF 347
Query: 237 SVLASAG--EDNQVALW 193
+LAS G D + W
Sbjct: 348 GLLASGGGTADRCIRFW 364
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = -3
Query: 396 ISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAG 217
+ W + +A G G + IWD+ + N + T + H V ++ W SVL+S
Sbjct: 215 VGWALRGTHLAIGTSSGTVQIWDVLRCKN---IRTMEGHRLRVGALAW---SSSVLSSGS 268
Query: 216 EDNQV 202
D +
Sbjct: 269 RDKSI 273
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 42.7 bits (96), Expect = 1e-04
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Frame = -3
Query: 474 IWDTRA-APQKACMLTAE-NAHQSDINVI--SWNGKEPFIASGGDDGFLHIWDLRQFTNS 307
+WD R APQ C+ E + H + N++ SW+ + +G D +HIWD T+
Sbjct: 248 VWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDT---TSR 304
Query: 306 TPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVAL 196
+ HT V + TEP ++ S D + L
Sbjct: 305 RTIYKLPGHTGSVNECVFHPTEP-IIGSCSSDKNIYL 340
Score = 35.5 bits (78), Expect = 0.022
Identities = 25/94 (26%), Positives = 45/94 (47%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WD R Q+ + T + +Q I +S++ I +GG D + +WDLR+
Sbjct: 165 LWDMR---QRGAIQTFPDKYQ--ITAVSFSDAADKIFTGGVDNDVKVWDLRK---GEATM 216
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
T + H +T + + S L + G DN++ +W
Sbjct: 217 TLEGHQDTITGMSLS-PDGSYLLTNGMDNKLCVW 249
Score = 33.1 bits (72), Expect = 0.12
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = -3
Query: 375 PFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVAL 196
P I SG DDG +WD+RQ + TF +T+V + + + G DN V +
Sbjct: 152 PLIISGSDDGTAKLWDMRQ---RGAIQTFP-DKYQITAVSFSDAADKIF-TGGVDNDVKV 206
Query: 195 W 193
W
Sbjct: 207 W 207
Score = 31.5 bits (68), Expect = 0.36
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFT-NSTPV 298
+WD R +T E HQ I +S + ++ + G D L +WD+R + + V
Sbjct: 206 VWDLRKGE---ATMTLEG-HQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCV 261
Query: 297 GTFK--HHTAPVTSVEWXWTEPSVLASAG-EDNQVALW 193
F+ H ++ W+ +AG D V +W
Sbjct: 262 KIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIW 299
Score = 30.3 bits (65), Expect = 0.82
Identities = 19/77 (24%), Positives = 32/77 (41%)
Frame = -3
Query: 423 NAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWT 244
+ H S + + +N IASG D + +W + + V K H + + W +
Sbjct: 50 SGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMV--LKGHKNAILDLHWT-S 106
Query: 243 EPSVLASAGEDNQVALW 193
+ S + SA D V W
Sbjct: 107 DGSQIVSASPDKTVRAW 123
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLR--QFTNSTP 301
+W+ A ++ ++ H+S++ +SWN +A+ G D + IW+++ +
Sbjct: 74 VWENFATDSES--VSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDT 131
Query: 300 VGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
+ H+ V V W T VL S DN + +W
Sbjct: 132 IAVLTGHSEDVKMVLWHPT-MDVLFSCSYDNTIKIW 166
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEP 238
H +D+ ++W+ + +ASG D +HIW++R +T + H + V V W
Sbjct: 117 HTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTT---VLRGHLSLVKGVTWD-PIG 172
Query: 237 SVLASAGEDNQVALW 193
S +AS +D V +W
Sbjct: 173 SFIASQSDDKTVIIW 187
Score = 41.5 bits (93), Expect = 3e-04
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Frame = -3
Query: 468 DTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG-- 295
D + K +L H +N + W ++ASG DD + I + + + +T G
Sbjct: 41 DLQNIDTKERLLATLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSG 100
Query: 294 ------------TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
T + HTA V + W + S+LAS DN V +W
Sbjct: 101 EAPDVENWKAVMTLRGHTADVVDLNWS-PDDSMLASGSLDNTVHIW 145
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 41.5 bits (93), Expect = 3e-04
Identities = 28/94 (29%), Positives = 39/94 (41%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WD + L + H + I++ AS G D +WDLR +
Sbjct: 365 LWDINTGAE----LLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLR---TGRSIL 417
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
F+ H PV SV + LAS GEDNQ +W
Sbjct: 418 VFQGHIKPVFSVNFS-PNGYHLASGGEDNQCRIW 450
Score = 34.3 bits (75), Expect = 0.050
Identities = 24/94 (25%), Positives = 40/94 (42%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WD R + H + ++++ +ASGG+D IWDLR +
Sbjct: 407 VWDLRTGRS----ILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRM---RKSLY 459
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
H V+ V++ E LA+A D +V +W
Sbjct: 460 IIPAHANLVSQVKYEPQEGYFLATASYDMKVNIW 493
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 41.5 bits (93), Expect = 3e-04
Identities = 28/83 (33%), Positives = 36/83 (43%)
Frame = -3
Query: 441 CMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTS 262
C+ TA I + F AS G D +WDLR N + F+ H V S
Sbjct: 121 CLATASTDRTEKIWKTDGTLLQTFKASSGFDSLARVWDLRTARN---ILIFQGHIKQVLS 177
Query: 261 VEWXWTEPSVLASAGEDNQVALW 193
V++ LAS GEDNQ +W
Sbjct: 178 VDFS-PNGYHLASGGEDNQCRIW 199
Score = 35.1 bits (77), Expect = 0.029
Identities = 25/94 (26%), Positives = 39/94 (41%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WD R A + H + + ++ +ASGG+D IWDLR +
Sbjct: 156 VWDLRTARN----ILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRM---RKLLY 208
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
H V+ V++ E LA+A D V +W
Sbjct: 209 IIPAHVNLVSQVKYEPQERYFLATASHDMNVNIW 242
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = -3
Query: 423 NAHQSDINVISW--NGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWX 250
+AHQ +N + + G +P++ +G DD +WD + + V T + HT V++V +
Sbjct: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD---YQTKSCVQTLEGHTHNVSAVCFH 238
Query: 249 WTEPSVLASAGEDNQVALW 193
E ++ + ED V +W
Sbjct: 239 -PELPIIITGSEDGTVRIW 256
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTE 241
AH I ++ + P++ S DD + +WD + T + F+ H+ V V + +
Sbjct: 97 AHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQI--FEGHSHYVMQVTFNPKD 154
Query: 240 PSVLASAGEDNQVALW 193
+ ASA D + +W
Sbjct: 155 TNTFASASLDRTIKIW 170
Score = 33.1 bits (72), Expect = 0.12
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIW 331
+WD + K+C+ T E H +++ + ++ + P I +G +DG + IW
Sbjct: 213 VWDYQT---KSCVQTLEG-HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 41.5 bits (93), Expect = 3e-04
Identities = 25/94 (26%), Positives = 44/94 (46%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WD R + + H D+N ++++ +A+G DD + +W++ + T
Sbjct: 333 VWDWRTETY----ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNV---MSGTCFI 385
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
TF HT VT++ + S+L SA D V W
Sbjct: 386 TFTEHTNAVTALHFMADNHSLL-SASLDGTVRAW 418
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 41.5 bits (93), Expect = 3e-04
Identities = 25/94 (26%), Positives = 44/94 (46%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WD R + + H D+N ++++ +A+G DD + +W++ + T
Sbjct: 373 VWDWRTETY----ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNV---MSGTCFI 425
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
TF HT VT++ + S+L SA D V W
Sbjct: 426 TFTEHTNAVTALHFMADNHSLL-SASLDGTVRAW 458
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 41.1 bits (92), Expect = 4e-04
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = -3
Query: 453 PQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG-TFKHHT 277
P K+ H+ ++ ++WN +ASG D IW++ +S K HT
Sbjct: 7 PFKSLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHT 66
Query: 276 APVTSVEWXWTEPSVLASAGEDNQVALW 193
V + W ++A+A D V LW
Sbjct: 67 DSVDQLCWDPKHSDLVATASGDKSVRLW 94
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 41.1 bits (92), Expect = 4e-04
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = -3
Query: 417 HQSDINVISWNGKEPF-IASGGDDGFLHIWDLRQFTNSTPV--GTFKHHTAPVTSVEWXW 247
H+ + + +N K P +ASG DDG + IWDL + + GT + + ++S+ W
Sbjct: 114 HKGPVRGLEFNVKSPNQLASGADDGTVCIWDLANPSKPSHYLKGTGSYMQSEISSLSWNK 173
Query: 246 TEPSVLASAGEDNQVALW 193
VLAS + +W
Sbjct: 174 GFQHVLASTSHNGTTVIW 191
Score = 34.7 bits (76), Expect = 0.038
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -3
Query: 387 NGKEPFIASGGDDGFLHIWD--LRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGE 214
+G + IA G DG + +W+ + V H PV +E+ P+ LAS +
Sbjct: 77 SGSDGLIAGGLVDGNIGLWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGAD 136
Query: 213 DNQVALW 193
D V +W
Sbjct: 137 DGTVCIW 143
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = -3
Query: 306 TPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALWXXXXXXXXXXXXXXXXXKNLPP 127
+PV TF H V ++EW ++ L + G+DN+ W LP
Sbjct: 243 SPVRTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICW---------NTKTGKIVAELP- 292
Query: 126 QLLFIHQGQTDIKELHWHKQLPGVIVAXAHTG 31
GQ ++HW+ ++PGVI A + G
Sbjct: 293 ------TGQNWNFDVHWYPKMPGVISASSVDG 318
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -3
Query: 426 ENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWX 250
E +H + ++WN + +AS D + +WD+ T + + T +HHT V +V W
Sbjct: 261 EGSHTESVLGLAWNKEFRNILASASADKKVKVWDVA--TGTCKI-TMEHHTKEVQAVAWN 317
Query: 249 WTEPSVLASAGEDNQVAL 196
P VL S D V +
Sbjct: 318 HYAPEVLLSGSFDQTVVM 335
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFI-ASGGDDGFLHIWD 328
+WD + + +C+ T + + + IS+ PF+ A GG G LH+WD
Sbjct: 431 LWDL-SNNEPSCIATHQ-PNAGAVFSISFAVDNPFLLAIGGSKGELHVWD 478
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = -3
Query: 438 MLTAENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTS 262
++T E+A + + +S++ P +ASGG G + IW+L + + + H + + S
Sbjct: 216 IVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIR--DAHDSSIIS 273
Query: 261 VEWXWTEPSVLASAGEDNQVALW 193
+ + EP VL SA DN + +W
Sbjct: 274 LNFLANEP-VLMSASADNSLKMW 295
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = -3
Query: 450 QKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKH-HTA 274
+K +AH S I +++ EP + S D L +W + F+ H+A
Sbjct: 256 KKRLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSA 315
Query: 273 PVTSVEWXWTEPSVLASAGEDNQVALW 193
P + + ++ + SAG+D L+
Sbjct: 316 PPLCIRF-YSNGRHILSAGQDRAFRLF 341
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = -3
Query: 423 NAHQSDINVISW--NGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWX 250
+AHQ +N + + G +P++ +G DD +WD + + V T HT V++V +
Sbjct: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD---YQTKSCVQTLDGHTHNVSAVCFH 238
Query: 249 WTEPSVLASAGEDNQVALW 193
E ++ + ED V +W
Sbjct: 239 -PELPIIITGSEDGTVRIW 256
Score = 35.1 bits (77), Expect = 0.029
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTE 241
AH I ++ + P++ S DD + +WD T + F+ H+ V V + +
Sbjct: 97 AHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQI--FEGHSHYVMQVVFNPKD 154
Query: 240 PSVLASAGEDNQVALW 193
+ ASA D + +W
Sbjct: 155 TNTFASASLDRTIKIW 170
Score = 31.9 bits (69), Expect = 0.27
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIW 331
+WD + K+C+ T + H +++ + ++ + P I +G +DG + IW
Sbjct: 213 VWDYQT---KSCVQTLDG-HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = -3
Query: 423 NAHQSDINVISW--NGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWX 250
+AHQ +N + + G +P++ +G DD +WD + + V T HT V++V +
Sbjct: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD---YQTKSCVQTLDGHTHNVSAVCFH 238
Query: 249 WTEPSVLASAGEDNQVALW 193
E ++ + ED V +W
Sbjct: 239 -PELPIIITGSEDGTVRIW 256
Score = 35.1 bits (77), Expect = 0.029
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTE 241
AH I ++ + P++ S DD + +WD T + F+ H+ V V + +
Sbjct: 97 AHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQI--FEGHSHYVMQVVFNPKD 154
Query: 240 PSVLASAGEDNQVALW 193
+ ASA D + +W
Sbjct: 155 TNTFASASLDRTIKIW 170
Score = 31.9 bits (69), Expect = 0.27
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIW 331
+WD + K+C+ T + H +++ + ++ + P I +G +DG + IW
Sbjct: 213 VWDYQT---KSCVQTLDG-HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = -3
Query: 423 NAHQSDINVISW--NGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWX 250
+AHQ +N + + G +P++ +G DD +WD + + V T HT V++V +
Sbjct: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD---YQTKSCVQTLDGHTHNVSAVCFH 238
Query: 249 WTEPSVLASAGEDNQVALW 193
E ++ + ED V +W
Sbjct: 239 -PELPIIITGSEDGTVRIW 256
Score = 35.1 bits (77), Expect = 0.029
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTE 241
AH I ++ + P++ S DD + +WD T + F+ H+ V V + +
Sbjct: 97 AHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQI--FEGHSHYVMQVVFNPKD 154
Query: 240 PSVLASAGEDNQVALW 193
+ ASA D + +W
Sbjct: 155 TNTFASASLDRTIKIW 170
Score = 31.9 bits (69), Expect = 0.27
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIW 331
+WD + K+C+ T + H +++ + ++ + P I +G +DG + IW
Sbjct: 213 VWDYQT---KSCVQTLDG-HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 40.3 bits (90), Expect = 8e-04
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -3
Query: 426 ENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWX 250
E ++S ++ + WN ++AS DG + +WD+ T + F H SV++
Sbjct: 749 EMPNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDV---TTGQAISHFIEHEKRAWSVDFS 805
Query: 249 WTEPSVLASAGEDNQVALW 193
P+ LAS +D V LW
Sbjct: 806 EACPTKLASGSDDCSVKLW 824
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -3
Query: 420 AHQSDINVISWNGKEP-FIASGGDDGFLHIWDLRQFT-NSTPVGTFKHHTAPVTSVEWXW 247
AH SD+N + + + I SG DD +WD R F P G H VT ++
Sbjct: 269 AHTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFID-SR 327
Query: 246 TEPSVLASAGEDNQVALW 193
+ S G+D + LW
Sbjct: 328 GDGRYFISNGKDQTIKLW 345
Score = 35.9 bits (79), Expect = 0.017
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = -3
Query: 378 EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVA 199
+ +I +G +D ++I+DL + V KHH++PV W P++++S+ D +
Sbjct: 413 QKYIYTGSNDSSVYIYDL---VSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSW-DGDLV 468
Query: 198 LW 193
W
Sbjct: 469 KW 470
Score = 30.7 bits (66), Expect = 0.62
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTP 301
+WD R + H + I G + S G D + +WD+R+ ++S P
Sbjct: 298 VWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRKMSSSAP 355
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 40.3 bits (90), Expect = 8e-04
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = -3
Query: 423 NAHQSDINVISW--NGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWX 250
+AH +N + + G +P++ +G DD +WD + + V T + HT V++V +
Sbjct: 182 DAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWD---YQTKSCVQTLEGHTHNVSAVSFH 238
Query: 249 WTEPSVLASAGEDNQVALW 193
E ++ + ED V +W
Sbjct: 239 -PELPIIITGSEDGTVRIW 256
Score = 35.1 bits (77), Expect = 0.029
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTE 241
AH I ++ + P++ S DD + +WD + T + F+ H+ V V + +
Sbjct: 97 AHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQI--FEGHSHYVMQVTFNPKD 154
Query: 240 PSVLASAGEDNQVALW 193
+ ASA D + +W
Sbjct: 155 TNTFASASLDRTIKIW 170
Score = 35.1 bits (77), Expect = 0.029
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIW 331
+WD + K+C+ T E H +++ +S++ + P I +G +DG + IW
Sbjct: 213 VWDYQT---KSCVQTLEG-HTHNVSAVSFHPELPIIITGSEDGTVRIW 256
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -3
Query: 417 HQSDINVISWNGKEP-FIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTE 241
H + I W+ +AS G DG +++W++ + V F HH APV V+W
Sbjct: 159 HTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWS-NDKKKVRAFLHHNAPVKDVKWSKQG 217
Query: 240 PSVLASAGED 211
S+L S G D
Sbjct: 218 LSLL-SCGYD 226
Score = 32.7 bits (71), Expect = 0.15
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 282 HTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
HT VT+++W + +LASAG D V +W
Sbjct: 159 HTKAVTAIDWSTSHVHLLASAGLDGAVYVW 188
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = -3
Query: 381 KEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQV 202
K+ FIASG +D ++IW + T V H V V W T +LASA +D +
Sbjct: 500 KQAFIASGSEDSQVYIW--HRSTGKLIV-ELPGHAGAVNCVSWSPTNLHMLASASDDGTI 556
Query: 201 ALW 193
+W
Sbjct: 557 RIW 559
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -3
Query: 417 HQSDINVISWNGKE-PFIASGGDDGFLHIWDL 325
H +N +SW+ +AS DDG + IW L
Sbjct: 530 HAGAVNCVSWSPTNLHMLASASDDGTIRIWGL 561
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -3
Query: 426 ENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWX 250
+ +H + ++WN + +AS D + +WD+ T + + T +HHT V +V W
Sbjct: 229 QGSHTRSVLGLAWNKEFRNILASASADKKVKVWDVA--TGTCKI-TMEHHTKEVQAVAWN 285
Query: 249 WTEPSVLASAGEDNQVAL 196
P VL S D V L
Sbjct: 286 HYAPEVLLSGSFDQTVVL 303
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Frame = -3
Query: 411 SDINVISWN--GKEPFIASGGDDGFLHIWDLRQFT----NSTPVGTFKHHTAPVTSVEWX 250
SD+ ++W+ + F+ S +DG + +D+RQ + S P T H TSV +
Sbjct: 320 SDVESLAWDPHSEHSFVVSL-EDGTVKGFDVRQASISASESNPSFTINGHDEAATSVSYN 378
Query: 249 WTEPSVLASAGEDNQVALW 193
+ P++LA+ +D V LW
Sbjct: 379 ISAPNLLATGSKDRTVKLW 397
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 12/72 (16%)
Frame = -3
Query: 372 FIASGGDDG-FLHIWDLRQFTNSTPV---------GTFKH--HTAPVTSVEWXWTEPSVL 229
F+A G D + IWDL + + P G +K HT V + W ++L
Sbjct: 190 FLAVGSDGTPTIEIWDLDAWFDMLPCVQLGGQNKEGNYKQGSHTRSVLGLAWNKEFRNIL 249
Query: 228 ASAGEDNQVALW 193
ASA D +V +W
Sbjct: 250 ASASADKKVKVW 261
>At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 512
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = -3
Query: 393 SWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGE 214
SW+ +I SG D +H++D+R + P + K H V EW +++P +L S
Sbjct: 445 SWSPDGLYITSGSVDPVIHVFDIR-YNARKPTQSIKAHQKRVFKAEWHYSQP-LLISISS 502
Query: 213 DNQVAL 196
D + L
Sbjct: 503 DLNIGL 508
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = -3
Query: 372 FIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
++ SG DG +IW + + P+ K H VT+V+W +E +A+A +D V LW
Sbjct: 352 YVLSGSSDGNAYIWQVNK-PQVDPI-ILKGHDFEVTAVDWSPSEIGKVATASDDFTVRLW 409
Score = 32.7 bits (71), Expect = 0.15
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTE 241
AH + I ISW + + + D + +WD+ + + G HT V S+ T
Sbjct: 126 AHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEE---NKCTGVLIGHTGTVKSMCSHPTN 182
Query: 240 PSVLASAGEDNQVALW 193
+L S D ALW
Sbjct: 183 SDLLVSGSRDGCFALW 198
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = -3
Query: 444 ACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVT 265
A L + H+ DI ++ + FIAS +D + +W L + PV + HT VT
Sbjct: 277 AYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRL---PDGLPVSVLRGHTGAVT 333
Query: 264 SVEWXWT--EPSVLASAGEDNQVALW 193
++ + P L S+ +D +W
Sbjct: 334 AIAFSPRPGSPYQLLSSSDDGTCRIW 359
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = -3
Query: 405 INVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLA 226
+N+I+W+ F+ + D + +W+ ++ + V + HTA ++ P +
Sbjct: 547 VNMIAWSLDNRFVLAAIMDCRICVWNA---SDGSLVHSLTGHTASTYVMDVHPFNPRIAM 603
Query: 225 SAGEDNQVALW 193
SAG D + +W
Sbjct: 604 SAGYDGKTIVW 614
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTE 241
AH DIN ++ + + +G +D IW L + V T K H + SVE+ +
Sbjct: 497 AHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVH---VVTLKGHKRRIFSVEFSTVD 553
Query: 240 PSVLASAGEDNQVALW 193
V+ ++G D V +W
Sbjct: 554 QCVMTASG-DKTVKIW 568
Score = 34.3 bits (75), Expect = 0.050
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -3
Query: 369 IASGGDDGFLHIWDLR-QFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
+ SG DD + +WDL + T + + H + VTS+ + L SAG D V LW
Sbjct: 161 LISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALS-EDGLTLFSAGRDKVVNLW 219
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/81 (28%), Positives = 42/81 (51%)
Frame = -3
Query: 435 LTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVE 256
L + N ++ ++N + NG+ F+AS D G + I DL Q + HT+ +SV+
Sbjct: 98 LESYNYNKDEVNQVVCNGRSSFLASADDSGDVKIIDLGQKCLYKTLRA--GHTSICSSVQ 155
Query: 255 WXWTEPSVLASAGEDNQVALW 193
+ P + + G D+++ LW
Sbjct: 156 FIPWRPWEVITGGLDSKLVLW 176
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = -3
Query: 450 QKACMLTAENAHQSDINVISWN---GKEPFIASGGDDGFLHIWD 328
++ C+ + H S ++ ++++ K F+ SGG+D + IWD
Sbjct: 262 KRVCLDYSVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = -3
Query: 393 SWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGE 214
+W + +ASG +D + +WD+ T V T +HH V +V W P VL S
Sbjct: 223 NWENRN-IVASGSEDKKVKVWDVA--TGKCKV-TMEHHEKKVHAVAWNNYTPEVLLSGSR 278
Query: 213 DNQVAL 196
D V L
Sbjct: 279 DRTVVL 284
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 384 GKEPFIASGGDDGFLHIWDLRQFTNSTP-VGTFKHHTAPVTSVEWXWTEPSVLASAGEDN 208
GK F+A G + + IWDL P V + + + + W +++AS ED
Sbjct: 178 GKGNFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQTLFFLTFNWENRNIVASGSEDK 237
Query: 207 QVALW 193
+V +W
Sbjct: 238 KVKVW 242
Score = 31.5 bits (68), Expect = 0.36
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -3
Query: 471 WDTRAAPQKACMLTAENAHQSDINVISWNGKEP-FIASGGDDGFLHIWDL 325
+DTRA+ + +AH S+++ IS+N P +A+G D + +WDL
Sbjct: 328 FDTRASDLSPSFII--HAHDSEVSSISYNIHAPNLLATGSADESVKLWDL 375
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTE 241
AH ++ I+W G F AS +DG + ++DLR +ST + + P+ + W +
Sbjct: 176 AHDKEVYDIAWGGVGVF-ASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQD 234
Query: 240 PSVLAS 223
P +A+
Sbjct: 235 PRYMAT 240
Score = 35.9 bits (79), Expect = 0.017
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -3
Query: 396 ISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAG 217
+SWN ++P + G I L + PV + H A V ++ W S + SAG
Sbjct: 228 LSWNKQDPRYMATVIMGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAG 287
Query: 216 EDNQVALW 193
+D+Q +W
Sbjct: 288 DDSQALIW 295
Score = 31.5 bits (68), Expect = 0.36
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Frame = -3
Query: 417 HQSDINVISWNG-KEPFIASGGDDGFLHIWDLRQFTNSTPVG--TFKHHT--APVTSVEW 253
HQ+ +N I+W I S GDD IWD+ G +T A V ++W
Sbjct: 266 HQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGGLDPILAYTAGAEVEQLQW 325
Query: 252 XWTEPSVLASA 220
++P +A A
Sbjct: 326 SSSQPDWVAIA 336
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 30.3 bits (65), Expect(2) = 0.003
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -3
Query: 444 ACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIW 331
A M+ N H+ I + ++ ++A+GG+DG + IW
Sbjct: 188 AYMVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
Score = 27.1 bits (57), Expect(2) = 0.003
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 306 TPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
TP HT V ++ W++ ++L SA +D V LW
Sbjct: 263 TPFQELYGHTGDV--LDLAWSDSNLLLSASKDKTVRLW 298
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 37.9 bits (84), Expect = 0.004
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = -3
Query: 450 QKACMLTAENAHQSDINVISWNGKE-PFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTA 274
+K ++ + H S IN ++ +G + SGG DG + +W+ + VG + HT
Sbjct: 247 RKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTE 306
Query: 273 PVTSVEWXWTEPSVLASAGEDNQVALW 193
V + +L S D V LW
Sbjct: 307 SVLCLA---VVSDILCSGSADKTVRLW 330
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 37.9 bits (84), Expect = 0.004
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -3
Query: 426 ENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWX 250
E A +S ++ + WN + IAS DG + IWD+ + S V K H V S++
Sbjct: 579 ELAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVAR---SQLVTEMKEHKKRVWSIDIS 635
Query: 249 WTEPSVLASAGED 211
+P++LAS +D
Sbjct: 636 SADPTLLASGSDD 648
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 37.9 bits (84), Expect = 0.004
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = -3
Query: 471 WDTRAAPQKACMLTAENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFTNSTPVG 295
WD R + + + E+AH + + +N K E + + D+ +H+WDLR+ PV
Sbjct: 195 WDLRTMKK---VNSIEHAH---VRGVDYNPKREHILVTAEDESGIHVWDLRK--AKVPVQ 246
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
HT +V ++ SAG D+ V LW
Sbjct: 247 ELPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -3
Query: 369 IASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQV 202
+ + GDDG +H+WD S + K H+AP V + + ++AS G D ++
Sbjct: 194 LVTAGDDGTVHLWDTT--GRSPKMSWLKQHSAPTAGVCFSPSNEKIIASVGMDKKL 247
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -3
Query: 366 ASGGDDGFLHIWDLRQFTNSTPVGTFKHHTA-PVTSVEWXWTEPSVLASAGEDNQVALW 193
ASGGD + ++D+ + V ++ V SV+W T V+AS GED +++LW
Sbjct: 15 ASGGDT--VKLFDVSADSGDPCVLSYTPSPGCAVNSVKWNHTN-LVVASTGEDKKISLW 70
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIW 331
++D A C+L+ + +N + WN +AS G+D + +W
Sbjct: 23 LFDVSADSGDPCVLSYTPSPGCAVNSVKWNHTNLVVASTGEDKKISLW 70
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 405 INVISWNGK-EPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSV 259
++ IS++ K +I SGG + IWDL++ + K HT+ +T V
Sbjct: 95 LSAISFSKKGSRYICSGGTGQIVKIWDLQR---KLCIKKLKGHTSTITGV 141
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 37.5 bits (83), Expect = 0.005
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLR---QFTNST 304
+WDTRAA + + + H+ D+N + + +G DDG ++D+R Q
Sbjct: 231 LWDTRAASRA---VRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQ 287
Query: 303 PVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
P G ++ PVTS+ + + + A +N +W
Sbjct: 288 PHGDGEN--GPVTSIAFSVSGRLLFAGYASNNTCYVW 322
Score = 28.3 bits (60), Expect = 3.3
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = -3
Query: 438 MLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ-FTNSTPVGTFKH-HTAPVT 265
MLT + S + N I S GD + +WD+ S G F+ HTA V
Sbjct: 151 MLTGHRGYVSCCQYVP-NEDAHLITSSGDQTCI-LWDVTTGLKTSVFGGEFQSGHTADVL 208
Query: 264 SVEWXWTEPSVLASAGEDNQVALW 193
SV + P+ S D+ LW
Sbjct: 209 SVSISGSNPNWFISGSCDSTARLW 232
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 37.5 bits (83), Expect = 0.005
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLR---QFTNST 304
+WDTRAA + + + H+ D+N + + +G DDG ++D+R Q
Sbjct: 169 LWDTRAASRA---VRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQ 225
Query: 303 PVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
P G ++ PVTS+ + + + A +N +W
Sbjct: 226 PHGDGEN--GPVTSIAFSVSGRLLFAGYASNNTCYVW 260
Score = 28.3 bits (60), Expect = 3.3
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = -3
Query: 438 MLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ-FTNSTPVGTFKH-HTAPVT 265
MLT + S + N I S GD + +WD+ S G F+ HTA V
Sbjct: 89 MLTGHRGYVSCCQYVP-NEDAHLITSSGDQTCI-LWDVTTGLKTSVFGGEFQSGHTADVL 146
Query: 264 SVEWXWTEPSVLASAGEDNQVALW 193
SV + P+ S D+ LW
Sbjct: 147 SVSISGSNPNWFISGSCDSTARLW 170
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 37.5 bits (83), Expect = 0.005
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLR---QFTNST 304
+WDTRAA + + + H+ D+N + + +G DDG ++D+R Q
Sbjct: 231 LWDTRAASRA---VRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQ 287
Query: 303 PVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
P G ++ PVTS+ + + + A +N +W
Sbjct: 288 PHGDGEN--GPVTSIAFSVSGRLLFAGYASNNTCYVW 322
Score = 28.3 bits (60), Expect = 3.3
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = -3
Query: 438 MLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ-FTNSTPVGTFKH-HTAPVT 265
MLT + S + N I S GD + +WD+ S G F+ HTA V
Sbjct: 151 MLTGHRGYVSCCQYVP-NEDAHLITSSGDQTCI-LWDVTTGLKTSVFGGEFQSGHTADVL 208
Query: 264 SVEWXWTEPSVLASAGEDNQVALW 193
SV + P+ S D+ LW
Sbjct: 209 SVSISGSNPNWFISGSCDSTARLW 232
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 37.5 bits (83), Expect = 0.005
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVIS--WNGKEPFIASGGDDGFLHIWDLRQFTNSTP 301
IWD + ++ + A + V + W+ IA G DG + IW L+ S P
Sbjct: 305 IWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRP 364
Query: 300 -VGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
+ K HT +TSV++ ++ +L S D + +W
Sbjct: 365 DIYVGKAHTDDITSVKFS-SDGRILLSRSFDGSLKVW 400
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTE 241
AH DI + ++ + S DG L +WDLRQ + V + P T+V + E
Sbjct: 371 AHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDE 430
Query: 240 PSVL 229
+L
Sbjct: 431 QIIL 434
Score = 31.1 bits (67), Expect = 0.47
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = -3
Query: 369 IASGGDDGFLHIWDLRQFTNSTPV---GTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVA 199
+ + +DG L IWD+ F + T V + PVT+ W + G D +
Sbjct: 294 VLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVG-DGSIQ 352
Query: 198 LW 193
+W
Sbjct: 353 IW 354
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 37.1 bits (82), Expect = 0.007
Identities = 23/94 (24%), Positives = 41/94 (43%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
++DTR + + N S+ + + + ++A+G DG +H+W L + V
Sbjct: 425 VFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHVWSL---SKGNIVS 481
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
K T+P+ W LASA ++ V W
Sbjct: 482 ILKEQTSPILCCSWSGI-GKPLASADKNGYVCTW 514
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 37.1 bits (82), Expect = 0.007
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = -3
Query: 477 GIWDTRAAPQKACMLTAENAHQSDINVISW-NGKEPFIASGGDDGFLHIWDLRQFTNSTP 301
GIW R + + + + V S + +A G DG + IWD + T
Sbjct: 42 GIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVAVGYADGSIRIWDTEKGTCEV- 100
Query: 300 VGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
F H VT++ + S+LAS +DN + LW
Sbjct: 101 --NFNSHKGAVTALRYNKVG-SMLASGSKDNDIILW 133
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDL 325
IWDT +K N+H+ + + +N +ASG D + +WD+
Sbjct: 90 IWDT----EKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDV 135
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 36.7 bits (81), Expect = 0.009
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPV- 298
IWD + A + +AH+ ++ + F+ +GG+DG + ++++R++ + T V
Sbjct: 319 IWDVSSETPLAII---PDAHEGTTYSLARSHTGDFLFTGGEDGGIKMFEIRRYGSETSVV 375
Query: 297 --GTFKHHTAPVTSV--EWXWTEPSVLASAGEDNQVAL 196
+ HT+PV S+ E+ W L SA D ++AL
Sbjct: 376 LISQWMPHTSPVYSLSFEFPW-----LVSASGDGKLAL 408
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 36.7 bits (81), Expect = 0.009
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -3
Query: 426 ENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 319
ENAH+ +N + N E IASG D G + IWD RQ
Sbjct: 33 ENAHEDAVNTLI-NVTETTIASGDDKGCVKIWDTRQ 67
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 36.7 bits (81), Expect = 0.009
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -3
Query: 426 ENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 319
ENAH+ +N + N E IASG D G + IWD RQ
Sbjct: 90 ENAHEDAVNTLI-NVTETTIASGDDKGCVKIWDTRQ 124
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 36.7 bits (81), Expect = 0.009
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = -3
Query: 471 WDTRAAPQKACMLTAENAHQSDINVISWNGK-EPFIASGGDDGFLHIWDLRQFTNSTPVG 295
WD R + + E AH + + +N K E + S D+ +H+WDLR+ PV
Sbjct: 195 WDLRTMKKNNSI---ERAH---VRNVDYNLKREHILVSADDESGIHLWDLRK--TKFPVQ 246
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
HT +V ++ S G D+ V LW
Sbjct: 247 ELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 36.3 bits (80), Expect = 0.012
Identities = 24/75 (32%), Positives = 39/75 (52%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEP 238
H+S + ++ + ++ASG +DG + +WDL TP+ H + V S+ + E
Sbjct: 540 HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPL---MGHNSCVWSLSYS-GEG 595
Query: 237 SVLASAGEDNQVALW 193
S+LAS D V LW
Sbjct: 596 SLLASGSADCTVKLW 610
Score = 30.3 bits (65), Expect = 0.82
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEP 238
H SD++ W+ +IA+G D + +WD++ V F H + V S+ +
Sbjct: 501 HLSDVD---WHPNCNYIATGSSDKTVRLWDVQ---TGECVRIFIGHRSMVLSLAMS-PDG 553
Query: 237 SVLASAGEDNQVALW 193
+AS ED + +W
Sbjct: 554 RYMASGDEDGTIMMW 568
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNST 304
+WD A C +T H S + +S++G+ +ASG D + +WD+ T T
Sbjct: 567 MWDLSTA---RC-ITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLT 619
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 36.3 bits (80), Expect = 0.012
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = -3
Query: 438 MLTAENAHQSDINVISWNGKE---PFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPV 268
++++ N+H + + ++ P A+GG D L IWDL+ +STP +H V
Sbjct: 276 VVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQ---HSTPRFICEHEEG-V 331
Query: 267 TSVEWXWTEPSVLASAGEDNQVALW 193
TS+ W T LA+ + V++W
Sbjct: 332 TSLTWIGTS-KYLATGCANGTVSIW 355
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -3
Query: 474 IWDTR-AAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWD 328
IWD + + P+ C H+ + ++W G ++A+G +G + IWD
Sbjct: 313 IWDLQHSTPRFIC------EHEEGVTSLTWIGTSKYLATGCANGTVSIWD 356
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 35.5 bits (78), Expect = 0.022
Identities = 20/81 (24%), Positives = 33/81 (40%)
Frame = -3
Query: 435 LTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVE 256
+T H + +SW+ + SG D L IW++R H V +V+
Sbjct: 395 VTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIR---TKKLKQDLPGHADEVFAVD 451
Query: 255 WXWTEPSVLASAGEDNQVALW 193
W + + S G+D + LW
Sbjct: 452 WS-PDGEKVVSGGKDRVLKLW 471
Score = 35.1 bits (77), Expect = 0.029
Identities = 25/90 (27%), Positives = 39/90 (43%)
Frame = -3
Query: 462 RAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKH 283
R P C T H + +S++ +ASG D + +WDL +T TP+ T K
Sbjct: 94 RIRPVNRCSQTIAG-HAEAVLCVSFSPDGKQLASGSGDTTVRLWDL--YT-ETPLFTCKG 149
Query: 282 HTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
H V +V W + L S + ++ W
Sbjct: 150 HKNWVLTVAWS-PDGKHLVSGSKSGEICCW 178
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 35.5 bits (78), Expect = 0.022
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDL--RQFTNSTPVGTFKHHTAPVTSVEW-XW 247
HQ +N ++WN + SG DD ++IW+ R+ +S G HTA + ++
Sbjct: 49 HQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTG----HTANIFCTKFVPE 104
Query: 246 TEPSVLASAGEDNQVALW 193
T ++ S D +V L+
Sbjct: 105 TSDELVVSGAGDAEVRLF 122
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 35.5 bits (78), Expect = 0.022
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Frame = -3
Query: 438 MLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDL--------RQFTNSTPVGTFKH 283
+L + H + + ++G + + SG DG + +W L RQ N+ F
Sbjct: 112 LLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNE 171
Query: 282 HTAPVTSVEWXWTE-PSVLASAGEDNQVALW 193
HT VT + + +V+ S+ ED +W
Sbjct: 172 HTMSVTDIVIDYGGCNAVIISSSEDRTCKVW 202
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 35.1 bits (77), Expect = 0.029
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGK----EPFIASGGDDGFLHIWDLRQFTNS 307
+W K A N H + ++W + IASG +DG + IW + +
Sbjct: 190 VWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVIIWTIGKEGEQ 249
Query: 306 TPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
K PV V W T ++LA + +N V +W
Sbjct: 250 WEGTVLKDFKTPVWRVSWSLT-GNLLAVSDGNNNVTVW 286
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 35.1 bits (77), Expect = 0.029
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = -3
Query: 426 ENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXW 247
E H+ ++ + + IA+ D + I + S + T H PV V W
Sbjct: 7 ETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVAWAH 66
Query: 246 TE-PSVLASAGEDNQVALW 193
+ S+LAS D QV LW
Sbjct: 67 PKYGSILASCSYDGQVILW 85
Score = 31.9 bits (69), Expect = 0.27
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -3
Query: 369 IASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
IASG DG + IW + + K PV V W T ++LA + +N V +W
Sbjct: 229 IASGSQDGKVIIWTVGKEGEQWEGKVLKDFMTPVWRVSWSLT-GNLLAVSDGNNNVTVW 286
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 35.1 bits (77), Expect = 0.029
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = -3
Query: 372 FIASGGDDGFLHIWD-----LRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDN 208
F+AS DGF+ +WD L++ +F H PV +++ + +LAS +D
Sbjct: 227 FLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFS-RDSEMLASGSQDG 285
Query: 207 QVALW 193
++ +W
Sbjct: 286 KIKIW 290
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 253
H + I ++ +ASG DG + IW +R + F H+ VTS+ +
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIR---TGVCIRRFDAHSQGVTSLSF 313
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 35.1 bits (77), Expect = 0.029
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -3
Query: 390 WNGKEPFI-ASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGE 214
WN K + AS D L IWD+R+ ST + H + S +W + +LA++
Sbjct: 157 WNPKHGDVFASASGDCTLRIWDVRE-PGSTMI--IPAHDFEILSCDWNKYDDCILATSSV 213
Query: 213 DNQVALW 193
D V +W
Sbjct: 214 DKTVKVW 220
Score = 33.5 bits (73), Expect = 0.088
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNG--KEPFIASGGDDGFLHIWDLRQFTNSTP 301
I+DT A P + + + H ++ + +N ++ F+ S DD + +W + +
Sbjct: 87 IYDT-ALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDT-VKLWAMDR---PAS 141
Query: 300 VGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
V TFK H V W V ASA D + +W
Sbjct: 142 VRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIW 177
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 34.3 bits (75), Expect = 0.050
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -3
Query: 417 HQSDINVISWNGKE-PFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTA--PVTSVEWXW 247
HQ+ +N I+W + I SGGDD IW+L + ++A + ++W
Sbjct: 263 HQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPMSVYSAGSEINQLQWSS 322
Query: 246 TEPSVLASA 220
++P + A
Sbjct: 323 SQPDWIGIA 331
Score = 33.5 bits (73), Expect = 0.088
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = -3
Query: 369 IASGGDDGFLHIWDLRQFTNST-PVGTFKHHT-----APVTSVEWXWTEPSVLASAGEDN 208
+AS GD FL +W++ + +++ P+ + AP+TS +W EP L + D
Sbjct: 98 LASSGD--FLRLWEINEDSSTVEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDT 155
Query: 207 QVALW 193
+W
Sbjct: 156 TCTIW 160
Score = 31.1 bits (67), Expect = 0.47
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -3
Query: 354 DDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
D + I D+R T PV + H A V ++ W + S G+D Q +W
Sbjct: 241 DSNKVVILDIRSPT--MPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIW 292
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 34.3 bits (75), Expect = 0.050
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -3
Query: 417 HQSDINVISWNGKE-PFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTA--PVTSVEWXW 247
HQ+ +N I+W + I SGGDD IW+L + ++A + ++W
Sbjct: 263 HQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPMSVYSAGSEINQLQWSS 322
Query: 246 TEPSVLASA 220
++P + A
Sbjct: 323 SQPDWIGIA 331
Score = 33.5 bits (73), Expect = 0.088
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = -3
Query: 369 IASGGDDGFLHIWDLRQFTNST-PVGTFKHHT-----APVTSVEWXWTEPSVLASAGEDN 208
+AS GD FL +W++ + +++ P+ + AP+TS +W EP L + D
Sbjct: 98 LASSGD--FLRLWEINEDSSTVEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDT 155
Query: 207 QVALW 193
+W
Sbjct: 156 TCTIW 160
Score = 31.1 bits (67), Expect = 0.47
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -3
Query: 354 DDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
D + I D+R T PV + H A V ++ W + S G+D Q +W
Sbjct: 241 DSNKVVILDIRSPT--MPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIW 292
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 34.3 bits (75), Expect = 0.050
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -3
Query: 417 HQSDINVISWNGKE-PFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTA--PVTSVEWXW 247
HQ+ +N I+W + I SGGDD IW+L + ++A + ++W
Sbjct: 263 HQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPMSVYSAGSEINQLQWSS 322
Query: 246 TEPSVLASA 220
++P + A
Sbjct: 323 SQPDWIGIA 331
Score = 33.5 bits (73), Expect = 0.088
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = -3
Query: 369 IASGGDDGFLHIWDLRQFTNST-PVGTFKHHT-----APVTSVEWXWTEPSVLASAGEDN 208
+AS GD FL +W++ + +++ P+ + AP+TS +W EP L + D
Sbjct: 98 LASSGD--FLRLWEINEDSSTVEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDT 155
Query: 207 QVALW 193
+W
Sbjct: 156 TCTIW 160
Score = 31.1 bits (67), Expect = 0.47
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -3
Query: 354 DDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
D + I D+R T PV + H A V ++ W + S G+D Q +W
Sbjct: 241 DSNKVVILDIRSPT--MPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIW 292
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 34.3 bits (75), Expect = 0.050
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -3
Query: 423 NAHQSDINVISWNGKEPFI-ASGGDDGFLHIWDLRQ 319
N HQ INV+ ++ PF+ A+ D + +WDLRQ
Sbjct: 580 NMHQEHINVVKFSNHSPFLFATSSFDKDVKLWDLRQ 615
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 33.9 bits (74), Expect = 0.067
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLR--QFTNSTPV-GTFKHHTAPVTSVEWXW 247
H +N I ++ +ASG D G L IW L + S V + H V ++W
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWS- 121
Query: 246 TEPSVLASAGEDNQVALW 193
+ + L S DN +W
Sbjct: 122 PDDAYLISGSVDNSCIIW 139
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 319
H+ D+ + W+ + ++ SG D IWD+ +
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNK 143
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 33.9 bits (74), Expect = 0.067
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLR--QFTNSTPV-GTFKHHTAPVTSVEWXW 247
H +N I ++ +ASG D G L IW L + S V + H V ++W
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWS- 121
Query: 246 TEPSVLASAGEDNQVALW 193
+ + L S DN +W
Sbjct: 122 PDDAYLISGSVDNSCIIW 139
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 319
H+ D+ + W+ + ++ SG D IWD+ +
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNK 143
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 33.9 bits (74), Expect = 0.067
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = -3
Query: 393 SWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGE 214
SW+ I+SG D +HI+D+R + +P + K H V EW + P +L S
Sbjct: 589 SWSPDGLHISSGSADPVIHIFDIR-YNAPSPSLSMKAHKKRVFKAEWHSSYP-LLVSISS 646
Query: 213 DNQVAL 196
D + +
Sbjct: 647 DLAIGI 652
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 33.5 bits (73), Expect = 0.088
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEP 238
H S I+ ++W+ + S DD L IWD R V + HT V V + P
Sbjct: 84 HSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKV--LRGHTNFVFCVN--FNPP 139
Query: 237 SVLASAGE-DNQVALW 193
S L +G D + +W
Sbjct: 140 SNLIVSGSFDETIRIW 155
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFT 313
AH I+ + +N I S DG IWD ++ T
Sbjct: 168 AHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGT 203
>At3g56990.1 68416.m06344 glycine-rich protein conserved
hypothetical protein SPCC330.09 - Schizosaccharomyces
pombe, PIR:T41319
Length = 711
Score = 33.5 bits (73), Expect = 0.088
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = -3
Query: 405 INVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKH---HTAPVTSVEWXWTEPS 235
+NV+S + +A GG+DG + +D+R +++ + H A VT++E+ +E
Sbjct: 185 LNVVSRSNLHGLVACGGEDGAVEFFDMRMKSSAARINAVTHGGDAAAEVTAIEFDDSEGL 244
Query: 234 VLASAGEDNQVALW 193
+A +V ++
Sbjct: 245 QVAVGSSAGKVFIY 258
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 33.5 bits (73), Expect = 0.088
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = -3
Query: 402 NVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLAS 223
+VIS +GKE + GG DG LHI+ + N + H +T + + + ++ AS
Sbjct: 317 SVISPDGKEAIV--GGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYS-PDLTMFAS 373
Query: 222 AGEDNQVALW 193
+ + +W
Sbjct: 374 GDANREAVVW 383
Score = 33.5 bits (73), Expect = 0.088
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
+WD K L H + IN ++W+ +A+G D + ++++ + +S +
Sbjct: 382 VWDRET---KQVKLNNMLFHTARINSLAWSPNNKMVATGSIDTCVIVYEVDKPASSR-IT 437
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
H V +V + + +AS+GED V LW
Sbjct: 438 ARNAHLGGVNAVAFI--DDCTVASSGEDASVRLW 469
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 33.5 bits (73), Expect = 0.088
Identities = 19/95 (20%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPV- 298
+W ++ ++ H+S +N ++ N + SG D + +W+ +N V
Sbjct: 260 VWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVR 319
Query: 297 GTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
G + H + S+ + +L S D V +W
Sbjct: 320 GALRGHDKAILSL---FNVSDLLLSGSADRTVRIW 351
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/80 (23%), Positives = 38/80 (47%)
Frame = -3
Query: 432 TAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW 253
T H + I I ++ + +A+ D + +WD S + TF H++ VTS+++
Sbjct: 687 TTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYS--LRTFMGHSSMVTSLDF 744
Query: 252 XWTEPSVLASAGEDNQVALW 193
+ ++ S DN++ W
Sbjct: 745 HPIKDDLICSCDNDNEIRYW 764
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 342 LHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
+ ++DLR + PV F HT V +V + +T ++ S ED V +W
Sbjct: 63 IRLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYT-GHMMYSGSEDGSVKIW 111
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDL------RQFTNSTPVGTFKHH 280
+H ++ + + + SG +DG + IWDL R+F + +PV T H
Sbjct: 82 SHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSPVNTVVLH 134
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLR 322
IWD R + C E S +N + + + + SG +G + +WDLR
Sbjct: 110 IWDLRV---RECQ--REFRSVSPVNTVVLHPNQTELISGDQNGNIRVWDLR 155
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 33.1 bits (72), Expect = 0.12
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTF--KHHTAPVTSVEWXW 247
+H S I ++ +G P ASGG D +H++DL +++ +G+ +H A +T++ +
Sbjct: 39 SHISPITTVACSG--PAAASGGSDDTIHLYDL---PSASSLGSLLDHNHAASITALSFYT 93
Query: 246 TE----PSVLASAGEDNQVALW 193
P L SA D VA++
Sbjct: 94 PSSLSFPRNLISAAADGSVAIF 115
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTN 310
IWD ++ A + H ++ IS++ F+A+ +DG + +WDLR+ N
Sbjct: 379 IWDVKSQANVAKF----DGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRKLRN 428
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTN 310
IWD ++ A + H ++ IS++ F+A+ +DG + +WDLR+ N
Sbjct: 379 IWDVKSQANVAKF----DGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRKLRN 428
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 32.3 bits (70), Expect = 0.20
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = -3
Query: 429 AENAHQSDINVISW----NGKEPFIASGGDDGFLHIWDLRQFT-NSTPVGTFKHHTAPVT 265
A+ + +SW NG P++A+GG G + + D+ T + + VG H V
Sbjct: 78 ADEDKEESFYTVSWACGVNGN-PYVAAGGVKGIIRVIDVNSETIHKSLVG----HGDSVN 132
Query: 264 SVEWXWTEPSVLASAGEDNQVALW 193
+ +P ++ +A +D V LW
Sbjct: 133 EIRTQPLKPQLVITASKDESVRLW 156
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 32.3 bits (70), Expect = 0.20
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -3
Query: 360 GGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
G D G ++WDLR V ++ H + S+++ P V+A++ D LW
Sbjct: 324 GQDYGVFNVWDLRA---GKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLW 376
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -3
Query: 369 IASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
+ G +DG + WDL ++ + F+ H VTSV + E +L S+ D + +W
Sbjct: 243 VIGGSEDGLVFFWDL---VDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSS-VDGTIRVW 297
>At5g57090.1 68418.m07128 auxin transport protein (EIR1) identical
to auxin transport protein EIR1 [Arabidopsis thaliana]
gi|3377507|gb|AAC39513; identical to root gravitropism
control protein [Arabidopsis thaliana]
gi|4322486|gb|AAD16060
Length = 647
Score = 31.9 bits (69), Expect = 0.27
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -3
Query: 408 DINVISWNGKEPFIASG--GDDGFLHIWDLRQFTNSTPVGTF-KHHTAPVTS 262
D +VIS NG+EP GDDG LH+ R S+ + +F K H + S
Sbjct: 178 DSDVISLNGREPLQTDAEIGDDGKLHVVVRRSSAASSMISSFNKSHGGGLNS 229
>At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40
repeats (PF00400); low similarity to MEK kinase alpha
(GI:4028547); transcriptional repressor TUP1
(GI:3406654) [Dictyostelium discoideum]; Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (TGF-beta receptor interacting protein 1)
(TRIP-1) (SP:Q38884) [Arabidopsis thaliana]
Length = 442
Score = 31.9 bits (69), Expect = 0.27
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNST 304
+WD RA L+ + I I I G +G +HIWDLR NS+
Sbjct: 177 VWDRRAGVSPCIELSTDR--YDSIKSIQIYVDNQTIFGAGKEGIIHIWDLRGGRNSS 231
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 31.9 bits (69), Expect = 0.27
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -3
Query: 423 NAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW-XW 247
N H+ +N + +N + SG DD + +W+ + S + H V ++ +
Sbjct: 52 NGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWN--WLSGSRKLSYPSGHCENVFQTKFIPF 109
Query: 246 TEPSVLASAGEDNQVAL 196
T+ + ++G D QV L
Sbjct: 110 TDDRTIITSGADGQVRL 126
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -3
Query: 471 WDTRAAPQKACMLTAENAHQSDINVISWNGKEPF-IASGGDDGFLHIWDLR 322
WD R +P + H + IS N +P+ I +G D L +WD R
Sbjct: 191 WDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLRVWDTR 241
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 31.5 bits (68), Expect = 0.36
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEP 238
H ++ ISW+ K+ ++ S D + +W + ++ +G F H++ VTSV++
Sbjct: 327 HTGEVLDISWS-KDNYLLSASMDKTVRLWKVG---SNDCLGVFAHNSY-VTSVQFNPVNE 381
Query: 237 SVLASAGEDNQVALW 193
+ S D +V +W
Sbjct: 382 NYFMSGSIDGKVRIW 396
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIW 331
AH I + ++ F+AS G+DG + +W
Sbjct: 219 AHDGAILAMKFSNDGKFLASSGEDGIVRVW 248
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 303 PVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
P+ F+ HT V + W ++ + L SA D V LW
Sbjct: 320 PLYEFRGHTGEVLDISW--SKDNYLLSASMDKTVRLW 354
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 31.5 bits (68), Expect = 0.36
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEP 238
H++ I+ ++++ FI S DD L +WD+ T S + T HT V + +
Sbjct: 70 HENGISDVAFSSDARFIVSASDDKTLKLWDVE--TGSL-IKTLIGHTNYAFCVNFN-PQS 125
Query: 237 SVLASAGEDNQVALW 193
+++ S D V +W
Sbjct: 126 NMIVSGSFDETVRIW 140
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 31.5 bits (68), Expect = 0.36
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDL 325
H +++NV++++ ++ SGG +G L +W L
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQL 312
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 31.5 bits (68), Expect = 0.36
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -3
Query: 396 ISWNGKEP-FIASG-GDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLAS 223
+ WN ++P ++A+ D + + D+R + PV + H A V ++ W + +
Sbjct: 228 LGWNKQDPRYMATIIMDSAKVVVLDIR--FPALPVVELQRHQASVNAIAWAPHSSCHICT 285
Query: 222 AGEDNQVALW 193
AG+D+Q +W
Sbjct: 286 AGDDSQALIW 295
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 31.1 bits (67), Expect = 0.47
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -3
Query: 435 LTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 319
L + N ++ ++N + NG+ F+AS D G + I DL Q
Sbjct: 98 LESYNYNKDEVNQVVCNGRSSFLASADDSGDVKIIDLGQ 136
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = -3
Query: 450 QKACMLTAENAHQSDINVISWN---GKEPFIASGGDDGFLHIWD 328
++ C+ + H S ++ ++++ K F+ SGG+D + IWD
Sbjct: 236 KRVCLDYSVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 31.1 bits (67), Expect = 0.47
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = -3
Query: 405 INVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLA 226
I V+++NG +A+ GDD + + + F S V K H PVT +++ +LA
Sbjct: 107 IRVLAFNGSGSLLAAAGDDEGIKL--INTFDGSI-VRVLKGHKGPVTGLDFH-PNGELLA 162
Query: 225 SAGEDNQVALW 193
S V W
Sbjct: 163 SIDTTGTVLCW 173
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 31.1 bits (67), Expect = 0.47
Identities = 21/90 (23%), Positives = 37/90 (41%)
Frame = -3
Query: 462 RAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKH 283
+++P T H+ + ++ N + SGG + L +WD R + S + +
Sbjct: 197 QSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKL---RG 253
Query: 282 HTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
HT V + T L S D+ + LW
Sbjct: 254 HTDNVRVLLLDSTGRFCL-SGSSDSMIRLW 282
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 31.1 bits (67), Expect = 0.47
Identities = 21/90 (23%), Positives = 37/90 (41%)
Frame = -3
Query: 462 RAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKH 283
+++P T H+ + ++ N + SGG + L +WD R + S + +
Sbjct: 197 QSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKL---RG 253
Query: 282 HTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
HT V + T L S D+ + LW
Sbjct: 254 HTDNVRVLLLDSTGRFCL-SGSSDSMIRLW 282
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 31.1 bits (67), Expect = 0.47
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 319
AH+ + I ++ ++ASGG D +H+W++++
Sbjct: 402 AHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQE 435
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 30.7 bits (66), Expect = 0.62
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = -3
Query: 471 WD-TRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
W+ +R+ A A +H + +W + SGG D +W L + PV
Sbjct: 52 WEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPL--LSGGQPV- 108
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
T H P+ ++ W ++LA+ D + W
Sbjct: 109 TVAMHEGPIAAMAWI-PGMNLLATGSWDKTLKYW 141
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 30.3 bits (65), Expect = 0.82
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -3
Query: 423 NAHQSDINVISWN--GKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSV 259
+AH +N +++ K+ + + GDD + +WDL + + TF+ H APV S+
Sbjct: 450 DAHVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDL----SGKKLFTFEGHEAPVYSI 502
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = -3
Query: 369 IASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
+ S G+D F IWD+R+ + H V S + + + + + +DN++ +W
Sbjct: 328 LLSCGNDHFARIWDMRKLQPKASLHDLAHKRV-VNSAYFSPSSGTKILTTCQDNRIRIW 385
>At4g01530.1 68417.m00198 hypothetical protein
Length = 239
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +1
Query: 277 SVMFECTHWSTICKLSQVP 333
+V+FEC+H IC+LS++P
Sbjct: 109 NVLFECSHSRKICELSKIP 127
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = -3
Query: 402 NVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLAS 223
NV S N +ASGG +HI+D+++ N PVG+ +A VTSV++ +L S
Sbjct: 442 NVDSENASS-LLASGGKGRAIHIYDVKR--NFDPVGSV-CGSAAVTSVKFACNGRKMLTS 497
Query: 222 AGEDNQV 202
+ Q+
Sbjct: 498 GADRLQM 504
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -3
Query: 387 NGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDN 208
N +P I S D + +W+L +N T HT V++V + S+ AS G+D
Sbjct: 161 NTLQPTIVSASWDKTVKVWNL---SNCKLRSTLAGHTGYVSTVAVS-PDGSLCASGGKDG 216
Query: 207 QVALW 193
V LW
Sbjct: 217 VVLLW 221
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/75 (20%), Positives = 35/75 (46%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEP 238
H+ + +++ + +GG + L I+DL + P + + +VEW ++
Sbjct: 96 HKHIVRACAFSEDTHRLLTGGMEKILRIFDLNR--PDAPPKEVGNSPGSIRTVEWLHSDN 153
Query: 237 SVLASAGEDNQVALW 193
++L+S + + LW
Sbjct: 154 TILSSCTDTGDIRLW 168
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 319
AHQ I + ++ +AS G+D +H+W++++
Sbjct: 409 AHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQE 442
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 319
H+S +N I+ + F S DD + +WD R+
Sbjct: 1080 HRSAVNDIATSSDHSFFVSASDDSTVKVWDSRK 1112
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = -3
Query: 369 IASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
+ SGGDDG + WD+ +T + H V + S+L + D+ V +W
Sbjct: 151 LVSGGDDGVVKYWDV---AGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVW 206
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = -3
Query: 348 GFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
G + ++D+++ + T + H+AP V++ + L S G+D V W
Sbjct: 115 GVVQVFDIKE---RMALRTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYW 163
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 405 INVISWNGKEPFIASGGDDGFLHIWD 328
+N I+++ ASGG DGF++IWD
Sbjct: 243 VNAIAFHPIYGTFASGGCDGFVNIWD 268
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/60 (25%), Positives = 25/60 (41%)
Frame = -3
Query: 438 MLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSV 259
+L+ H + I + G + + D + IW + N T T K H+A V +V
Sbjct: 256 ILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAV 315
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = -3
Query: 369 IASGGDDGFLHIWDLR--QFTNSTPV-GTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVA 199
+ASG D G L IW L + S V + H V ++W + + L S DN
Sbjct: 20 LASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWS-PDDAYLISGSVDNSCI 78
Query: 198 LW 193
+W
Sbjct: 79 IW 80
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 319
H+ D+ + W+ + ++ SG D IWD+ +
Sbjct: 52 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNK 84
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = -3
Query: 372 FIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
++A+GG D +HIWD+R V F H V+ + + + S L S D V +W
Sbjct: 236 YLATGGVDRHVHIWDVR---TREHVQAFPGHRNTVSCLCFRY-GTSELYSGSFDRTVKVW 291
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 29.1 bits (62), Expect = 1.9
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 423 NAHQSDINVISWNGKEPFIASGGDDGFLHIWDLR 322
++H +++ + + ++ SG +DG + IWDLR
Sbjct: 75 DSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLR 108
Score = 29.1 bits (62), Expect = 1.9
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
IWD RA C E+ + +N + + + + SG +G + +WDLR NS
Sbjct: 104 IWDLRAP---GCQKEYESV--AAVNTVVLHPNQTELISGDQNGNIRVWDLR--ANSCSCE 156
Query: 294 TFKHHTAPVTSVEWXWTEPSVLAS 223
V S+ W V+A+
Sbjct: 157 LVPEVDTAVRSLTVMWDGTMVVAA 180
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = -3
Query: 453 PQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHT 277
P L H ++ ++++ +A+ G + + IWDLR+F + +F T
Sbjct: 268 PTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTIHSFHAKT 326
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = -3
Query: 477 GIWDTRAAPQKACMLTAE-----NAHQSDINVISWNGKEPFIASGGDDGFLHIW 331
GIW AP L + + HQ ++ + W+ +AS G DG + +W
Sbjct: 254 GIWHVGLAPDLEGRLPVKKVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLW 307
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWD 328
H+ +N +S+N + + SG DD + +WD
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLWD 87
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/59 (25%), Positives = 32/59 (54%)
Frame = -3
Query: 369 IASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
+ +G +DG + +WD+R P+ + K H+ PV S+ + + S G D+++ ++
Sbjct: 234 VLAGYEDGSILLWDIR--NAKIPLTSVKFHSEPVLSLSVASSCDGGI-SGGADDKIVMY 289
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = -3
Query: 366 ASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
A+ G D + +++ R+ + K+H A +V + + ++ASA ED VALW
Sbjct: 324 ATAGWDHRIRVYNYRK---GNALAILKYHRATCNAVSYS-PDCELMASASEDATVALW 377
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/82 (20%), Positives = 34/82 (41%)
Frame = -3
Query: 438 MLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSV 259
++ + + H S + ++ + + +GG D +WD+R + H V SV
Sbjct: 252 VIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIR---TKMQIFALSGHDNTVCSV 308
Query: 258 EWXWTEPSVLASAGEDNQVALW 193
T+P V+ + D + W
Sbjct: 309 FTRPTDPQVV-TGSHDTTIKFW 329
Score = 28.3 bits (60), Expect = 3.3
Identities = 21/94 (22%), Positives = 39/94 (41%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVG 295
IWD K + H + ++ + + ++ S GDD + WDL Q + +
Sbjct: 202 IWDVATGVLKLTL----TGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQ---NKVIR 254
Query: 294 TFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
++ H + V + T VL + G D+ +W
Sbjct: 255 SYHGHLSGVYCLALHPT-LDVLLTGGRDSVCRVW 287
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 319
H +N ++ + ASGG DG + +WDL +
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAE 224
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWDLRQ 319
H +N ++ + ASGG DG + +WDL +
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAE 224
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 312 NSTPVGTFKHHTAPVTSVEWXWTEPSVLASAGEDNQVALW 193
+ TP F+ HT + + W +E L S+ D V LW
Sbjct: 352 SETPQHEFRGHTGEILDLSW--SEKGFLLSSSVDETVRLW 389
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = -3
Query: 441 CMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDL 325
C+ +AH I V+ ++ ++AS G+D + +W++
Sbjct: 248 CVGQEFSAHDGSIVVMKFSHDGKYLASAGEDCVVRVWNI 286
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDL 325
AH+ I + ++ ++AS G+DG L +W +
Sbjct: 249 AHEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDL 325
AH+ I + ++ ++AS G+DG L +W +
Sbjct: 249 AHEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 417 HQSDINVISWNGKEPFIASGGDDGFLHIWD 328
H+ +N +S+N + SG DD + +WD
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWD 83
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 8/43 (18%)
Frame = -3
Query: 432 TAENAHQSDINVISWNGK--------EPFIASGGDDGFLHIWD 328
TAE AH+ DI ISW K + + GDD + +W+
Sbjct: 381 TAEKAHEGDITCISWAPKAITVGERHAMVLGTSGDDKKVKLWE 423
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 27.9 bits (59), Expect = 4.4
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 12/79 (15%)
Frame = -3
Query: 393 SWNGKEPFIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPVTSVEW--XWTEPSV---- 232
SW+ +I +GG+D + +W + + V + H + V+ V + W+ P+
Sbjct: 352 SWSMDGKYILTGGEDDLVQVWSME---DRKVVAWGEGHNSWVSGVAFDSNWSSPNSDGSG 408
Query: 231 ------LASAGEDNQVALW 193
S G+D Q+ LW
Sbjct: 409 EHVMYRFGSVGQDTQLLLW 427
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 27.9 bits (59), Expect = 4.4
Identities = 9/36 (25%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 423 NAHQSDINVISWNGKEPFIA-SGGDDGFLHIWDLRQ 319
+ H+ + + W+ ++ +GG DG + WD+R+
Sbjct: 187 SGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRR 222
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 27.9 bits (59), Expect = 4.4
Identities = 9/36 (25%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 423 NAHQSDINVISWNGKEPFIA-SGGDDGFLHIWDLRQ 319
+ H+ + + W+ ++ +GG DG + WD+R+
Sbjct: 187 SGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRR 222
>At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1
significant, 2 weak WD-40 repeats (PF00400); similar to
transducin beta-like 1 protein.(SP:O60907) [Homo
sapiens]
Length = 467
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 378 EPFIASGGDDGFLHIWDLR 322
E FI SGGDD + IW ++
Sbjct: 400 ERFILSGGDDCYTRIWSIK 418
>At3g19960.1 68416.m02526 myosin (ATM) nearly identical to myosin
[Arabidopsis thaliana] GI:6491702; similar to myosin
GI:6491702 from [Arabidopsis thaliana] ;contains Pfam
profiles: PF00063: myosin head (motor domain), PF00612:
IQ calmodulin-binding motif; identical to cDNA myosin
(ATM) GI:297068
Length = 1166
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 491 DKDHKEYGILEQHHKRLACSQLKMHIKVTLMLYHGM-EKSHLLQAAV 354
+K KE+ L + HK A Q ++ K+ + Y G+ + S ++Q+A+
Sbjct: 876 EKIRKEFAELRRRHKAAATIQSQVKSKIARIQYKGIADASVVIQSAI 922
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 405 INVISWNGKEPFIASGGDDGFLHIWD 328
+N I+++ A+GG DGF++IWD
Sbjct: 244 VNSIAFHPIYGTFATGGCDGFVNIWD 269
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -3
Query: 474 IWDTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDLR 322
+WD R Q + H SD+ + +P + +G D + WDLR
Sbjct: 280 VWDIRTKMQIFVL-----PHDSDVFSVLARPTDPQVITGSHDSTIKFWDLR 325
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 420 AHQSDINVISWNGKEPFIASGGDDGFLHIWDL 325
AH I I ++ ++AS G+D +HIW +
Sbjct: 411 AHNGSIWSIKFSLDGKYLASAGEDCIIHIWQV 442
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -3
Query: 414 QSDINVISWNGKEPFIASGGDDGFLHIWDLR 322
QS +S +G+ ++A+GG D +H+WD+R
Sbjct: 208 QSLALAVSSDGR--YLATGGVDCHVHLWDIR 236
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 405 INVISWNGKEPFIASGGDDGFLHIWD 328
IN W I SGG+D + IWD
Sbjct: 178 INRAVWGPLNQTIVSGGEDAAIRIWD 203
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 468 DTRAAPQKACMLTAENAHQSDINVISWNGKEPFIASGGDDGFLHIWDL 325
D R P +C L + H + IS + +IASG DG + +W++
Sbjct: 407 DLRPYPN-SCYLEYKG-HTGAVTSISTDSSGEWIASGSTDGSVRMWEV 452
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,182,536
Number of Sequences: 28952
Number of extensions: 189260
Number of successful extensions: 944
Number of sequences better than 10.0: 154
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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