Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304F10f
(423 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F5Y5 Cluster: Ribosomal protein S33; n=4; Endopterygo... 148 5e-35
UniRef50_Q6L5P4 Cluster: Mitochondrial ribosomal protein S33; n=... 69 3e-11
UniRef50_Q9Y291 Cluster: Mitochondrial 28S ribosomal protein S33... 69 5e-11
UniRef50_UPI0000E4A035 Cluster: PREDICTED: similar to LOC495310 ... 65 5e-10
UniRef50_Q5BST1 Cluster: SJCHGC03339 protein; n=1; Schistosoma j... 56 3e-07
UniRef50_A7SQA5 Cluster: Predicted protein; n=1; Nematostella ve... 50 3e-05
UniRef50_Q19685 Cluster: Putative uncharacterized protein; n=2; ... 46 3e-04
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 35 0.79
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 35 0.79
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ... 33 2.4
UniRef50_A6Q5I1 Cluster: Putative uncharacterized protein; n=1; ... 32 4.2
UniRef50_A2X0X0 Cluster: Putative uncharacterized protein; n=2; ... 32 5.6
UniRef50_Q6VT82 Cluster: Cytochrome P450 CYP330A1; n=1; Carcinus... 31 7.4
UniRef50_Q6C5K8 Cluster: Similar to tr|Q08204 Saccharomyces cere... 31 7.4
UniRef50_Q0UHN9 Cluster: Putative uncharacterized protein; n=1; ... 31 7.4
UniRef50_UPI0000E47152 Cluster: PREDICTED: similar to Eps8, part... 31 9.7
UniRef50_Q6GH85 Cluster: Sensor kinase protein; n=11; Staphyloco... 31 9.7
UniRef50_P49966 Cluster: Signal recognition particle 54 kDa prot... 31 9.7
UniRef50_Q9Y805 Cluster: Pre-mRNA-splicing factor cwc25; n=1; Sc... 31 9.7
>UniRef50_Q2F5Y5 Cluster: Ribosomal protein S33; n=4;
Endopterygota|Rep: Ribosomal protein S33 - Bombyx mori
(Silk moth)
Length = 118
Score = 148 bits (358), Expect = 5e-35
Identities = 68/75 (90%), Positives = 69/75 (92%)
Frame = +1
Query: 1 VXKIFSARPLHTNEEIIHYYPRHMETHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGKV 180
V KIFSARPLHTNEEI+HYYP HMETHKLMMNL DYGLFRDEHQDFKEEMK LRELRGKV
Sbjct: 44 VVKIFSARPLHTNEEIMHYYPSHMETHKLMMNLSDYGLFRDEHQDFKEEMKSLRELRGKV 103
Query: 181 KVWRRLLDKKAE*KE 225
KVW RLLDKKAE KE
Sbjct: 104 KVWSRLLDKKAEAKE 118
>UniRef50_Q6L5P4 Cluster: Mitochondrial ribosomal protein S33; n=9;
Euteleostomi|Rep: Mitochondrial ribosomal protein S33 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 106
Score = 69.3 bits (162), Expect = 3e-11
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +1
Query: 1 VXKIFSARPLHTNEEIIHYYPRHMETHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGK 177
V ++F PL +E+ +YP H + + LR GLFRDEHQDFKEEM+RLR+LRGK
Sbjct: 33 VVELFKEPPLAQRKEVYDWYPPHKIYYSMTQRLRYMGLFRDEHQDFKEEMRRLRKLRGK 91
>UniRef50_Q9Y291 Cluster: Mitochondrial 28S ribosomal protein S33;
n=20; Coelomata|Rep: Mitochondrial 28S ribosomal protein
S33 - Homo sapiens (Human)
Length = 106
Score = 68.5 bits (160), Expect = 5e-11
Identities = 32/61 (52%), Positives = 40/61 (65%)
Frame = +1
Query: 1 VXKIFSARPLHTNEEIIHYYPRHMETHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGKV 180
V K+FS PL +E +YP H +LM LR GL+RDEHQDF +E KRL++LRGK
Sbjct: 33 VVKLFSELPLAKKKETYDWYPNHHTYAELMQTLRFLGLYRDEHQDFMDEQKRLKKLRGKE 92
Query: 181 K 183
K
Sbjct: 93 K 93
>UniRef50_UPI0000E4A035 Cluster: PREDICTED: similar to LOC495310
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC495310 protein -
Strongylocentrotus purpuratus
Length = 76
Score = 65.3 bits (152), Expect = 5e-10
Identities = 27/59 (45%), Positives = 41/59 (69%)
Frame = +1
Query: 1 VXKIFSARPLHTNEEIIHYYPRHMETHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGK 177
V ++ P + I+ YYP HM++ KLM LR GL+RDEH DF++EMKR+++++GK
Sbjct: 3 VVEMMREEPRQMRKHIVDYYPPHMQSFKLMGYLRYIGLYRDEHADFRDEMKRVQKMKGK 61
>UniRef50_Q5BST1 Cluster: SJCHGC03339 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03339 protein - Schistosoma
japonicum (Blood fluke)
Length = 97
Score = 56.0 bits (129), Expect = 3e-07
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = +1
Query: 55 YYPRHMETHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGKVK 183
YYP E +M LR GL+RDEH DF+EEM+RLR LRGK K
Sbjct: 47 YYPALEEYSNIMQKLRYLGLYRDEHADFREEMERLRVLRGKGK 89
>UniRef50_A7SQA5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 100
Score = 49.6 bits (113), Expect = 3e-05
Identities = 26/55 (47%), Positives = 33/55 (60%)
Frame = +1
Query: 13 FSARPLHTNEEIIHYYPRHMETHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGK 177
FS RPL I YYP + + L++ LR G +RD+H DFKEEM R+ RGK
Sbjct: 35 FSRRPL--GGAINSYYPPLKQFNSLLLRLRHLGFYRDDHLDFKEEMAVRRKERGK 87
>UniRef50_Q19685 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 126
Score = 46.0 bits (104), Expect = 3e-04
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 1 VXKIFSARPLHTNEEII-HYYPRHMETHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGK 177
V ++ SA P T E++ YYP H L LR +GLF D+H F++ L+ +RGK
Sbjct: 49 VVRVMSAEPYETKEQLSPKYYPNLPMFHYLTKMLRFHGLFFDDHVVFRDVQDNLKIIRGK 108
Query: 178 V 180
V
Sbjct: 109 V 109
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 34.7 bits (76), Expect = 0.79
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 363 HWPSFYNVVTGKNXGVTQL 419
HWPSFYNVVTGK + L
Sbjct: 5 HWPSFYNVVTGKTLALPNL 23
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 34.7 bits (76), Expect = 0.79
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 312 RGGARYPIXPIVSRIT 359
RGGARYPI PIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275
>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
uncultured bacterium|Rep: Non-ribosomal peptide
synthetase - uncultured bacterium
Length = 338
Score = 33.1 bits (72), Expect = 2.4
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1
Query: 354 YDSL*GELGTGPPLE 310
YDSL GELGTGPPLE
Sbjct: 278 YDSLYGELGTGPPLE 292
>UniRef50_A6Q5I1 Cluster: Putative uncharacterized protein; n=1;
Nitratiruptor sp. SB155-2|Rep: Putative uncharacterized
protein - Nitratiruptor sp. (strain SB155-2)
Length = 1006
Score = 32.3 bits (70), Expect = 4.2
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 28 LHTNEEIIHYYPRHMETHKLMMNLRDYGLFRDEHQDFKEEMKRL 159
L N E+ Y+PR + H + + G+ E +DF+EE+K L
Sbjct: 230 LQPNIEMFVYHPRFLGVHLRVSKVSRGGIRWSEREDFREEIKSL 273
>UniRef50_A2X0X0 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 259
Score = 31.9 bits (69), Expect = 5.6
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 34 TNEEIIHYYPRHMETHKL---MMNLRDYGLFRDEHQDFKEEMKRLREL 168
TNE +I +ETHK M+N R + D HQ +K E++ L+++
Sbjct: 141 TNEAVIKQLNLELETHKAHIDMLNSRLEQVTADVHQQYKNEIQDLKDV 188
>UniRef50_Q6VT82 Cluster: Cytochrome P450 CYP330A1; n=1; Carcinus
maenas|Rep: Cytochrome P450 CYP330A1 - Carcinus maenas
(Common shore crab) (Green crab)
Length = 502
Score = 31.5 bits (68), Expect = 7.4
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +1
Query: 43 EIIHYYPRHMETHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGKVKVWRRLLDKK 210
+I+HY PRH + H+ M L ++ ++E ++F + + L+ V+ R ++KK
Sbjct: 238 KIMHYLPRHSKGHRFMRRLINF--IKEEIKEFMDN-EELKNSDNFAAVYLREIEKK 290
>UniRef50_Q6C5K8 Cluster: Similar to tr|Q08204 Saccharomyces
cerevisiae YOL034w involved in DNA repair; n=2; Yarrowia
lipolytica|Rep: Similar to tr|Q08204 Saccharomyces
cerevisiae YOL034w involved in DNA repair - Yarrowia
lipolytica (Candida lipolytica)
Length = 1117
Score = 31.5 bits (68), Expect = 7.4
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +1
Query: 13 FSARPLHTNEEIIHYYPRHMETHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGKVKVWR 192
+ R T E I YP ++ + L D ++ + + E ++RLR L+ +VK
Sbjct: 643 YGQRYTSTKSEPIDTYPPKKDSQIIYEKLPDRSREQELQEQYDELVQRLRPLKEEVKTAN 702
Query: 193 RLLDKKAE*K 222
LL KA K
Sbjct: 703 SLLQDKAHLK 712
>UniRef50_Q0UHN9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 891
Score = 31.5 bits (68), Expect = 7.4
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 88 MMNLRDYGLFRDEHQDFKEEMKRLRELRGKVKVWRRLLDKKAE*KE 225
+MN + D+ + + E+KRL E+ +++ WRR L K+ E KE
Sbjct: 463 LMNFFYNPIDMDKAKGKQAELKRLSEIHMRLETWRRELPKELEPKE 508
>UniRef50_UPI0000E47152 Cluster: PREDICTED: similar to Eps8,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Eps8, partial - Strongylocentrotus
purpuratus
Length = 970
Score = 31.1 bits (67), Expect = 9.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 422 IKLGNAXVFPSHDVVKRRPVNCNTTHYRXNWVPGP 318
+ LG A PS + K RPV+ +R W+P P
Sbjct: 547 MSLGRAWTLPSTEWPKDRPVSRYVPRFRDGWIPRP 581
>UniRef50_Q6GH85 Cluster: Sensor kinase protein; n=11;
Staphylococcus aureus subsp. aureus|Rep: Sensor kinase
protein - Staphylococcus aureus (strain MRSA252)
Length = 363
Score = 31.1 bits (67), Expect = 9.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 31 HTNEEIIHYYPRHMETHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGKVKV 186
H N +H R M HKL ++D G D + K +R++ L G ++V
Sbjct: 294 HANASKVHGQLRAMNEHKLQFIIQDNGEGIDSGCEIKSISQRVKHLNGTLEV 345
>UniRef50_P49966 Cluster: Signal recognition particle 54 kDa protein
2; n=8; Magnoliophyta|Rep: Signal recognition particle
54 kDa protein 2 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 495
Score = 31.1 bits (67), Expect = 9.7
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 34 TNEEIIHYYPRHMETHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGKVKVWRRL 198
TNEE+ P+ ++M R G E + EE KRL + GKVK + L
Sbjct: 384 TNEELDSSNPKVFNESRIMRIARGSGRIVREVMEMLEEYKRLTTMWGKVKGLKNL 438
>UniRef50_Q9Y805 Cluster: Pre-mRNA-splicing factor cwc25; n=1;
Schizosaccharomyces pombe|Rep: Pre-mRNA-splicing factor
cwc25 - Schizosaccharomyces pombe (Fission yeast)
Length = 376
Score = 31.1 bits (67), Expect = 9.7
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +1
Query: 79 HKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGKVKVWRRLLD 204
H L+M ++ +++DE Q KEEMKR+ +LR +++ R+LL+
Sbjct: 13 HPLLMRNQEK-VWKDE-QAHKEEMKRVEQLRREIEEERQLLE 52
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 362,224,956
Number of Sequences: 1657284
Number of extensions: 5557965
Number of successful extensions: 13633
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 13369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13625
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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