Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304F09f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 260 2e-68
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 218 7e-56
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 184 1e-45
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 145 5e-34
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 138 7e-32
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 134 2e-30
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 131 8e-30
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 118 8e-26
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 115 8e-25
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 115 8e-25
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 114 1e-24
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 114 1e-24
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 92 6e-18
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 88 1e-16
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 83 5e-15
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 52 8e-06
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 49 7e-05
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 46 7e-04
UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein ... 44 0.002
UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albic... 40 0.026
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 38 0.18
UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7; n... 38 0.18
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 37 0.24
UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n... 37 0.32
UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.43
UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.43
UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD... 36 0.56
UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyc... 36 0.74
UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2; ... 35 0.98
UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|R... 35 1.3
UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211; Bacter... 35 1.3
UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor; ... 33 3.0
UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1; ... 33 4.0
UniRef50_A6G0N7 Cluster: Serine/threonine protein kinase; n=1; P... 32 6.9
UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7; n... 32 6.9
UniRef50_A6SU82 Cluster: DNA topoisomerase III; n=57; Betaproteo... 32 9.2
UniRef50_A7EQB6 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
UniRef50_A6RZ06 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 260 bits (636), Expect = 2e-68
Identities = 122/138 (88%), Positives = 130/138 (94%)
Frame = +2
Query: 107 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 286
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 287 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 466
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 467 GRAGTVRRQAVDVSPLRR 520
GRAGTVRRQAVDVSPLRR
Sbjct: 129 GRAGTVRRQAVDVSPLRR 146
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 218 bits (532), Expect = 7e-56
Identities = 102/132 (77%), Positives = 117/132 (88%), Gaps = 1/132 (0%)
Frame = +2
Query: 128 EIKLFGRWSCYDVQVSDMSLQDYISV-KEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTN 304
E+KLF RWS DVQ+SD+SL DYI V K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67
Query: 305 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 484
SLMMHGRNNGKKLMAVRI+KHA EIIHLLT +NP+QV+V A++NSGPRED+TRIG AG V
Sbjct: 68 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 127
Query: 485 RRQAVDVSPLRR 520
RRQAVD+SPLRR
Sbjct: 128 RRQAVDISPLRR 139
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 184 bits (448), Expect = 1e-45
Identities = 96/149 (64%), Positives = 115/149 (77%)
Frame = +2
Query: 74 AGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYA 253
A S++ + +SL + IKLF ++ V+V D+SL DYI++ + LPH+AGR+
Sbjct: 2 AASIIPKEVSLDETG---HIKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRFQ 56
Query: 254 HKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAII 433
KRFRKA+C IVERLTNSLMM+GRNNGKKL+A RIVKHAFEII LLT +NPLQVLV A+
Sbjct: 57 TKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVA 116
Query: 434 NSGPREDSTRIGRAGTVRRQAVDVSPLRR 520
GPREDSTRIG AGTVRRQAVDVSPLRR
Sbjct: 117 ACGPREDSTRIGSAGTVRRQAVDVSPLRR 145
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 145 bits (352), Expect = 5e-34
Identities = 63/131 (48%), Positives = 92/131 (70%)
Frame = +2
Query: 128 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 307
++K+F RW V+++D+S+ +YI +KY + +PHS+G Y K F+K CPI+ERL S
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVPHSSGNYDKKPFKKTYCPILERLVCS 78
Query: 308 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 487
LM+ RN+GKK+ + IVKHAF ++H TG+NP+Q+LV AI N P EDS + +G +
Sbjct: 79 LMLKSRNSGKKIKTIAIVKHAFYLLHKTTGKNPIQLLVDAISNCAPHEDSLMLSNSGQKK 138
Query: 488 RQAVDVSPLRR 520
R+AVDVSP R+
Sbjct: 139 REAVDVSPYRK 149
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 138 bits (334), Expect = 7e-32
Identities = 70/131 (53%), Positives = 90/131 (68%)
Frame = +2
Query: 128 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 307
E+K+FG+W +V+V D L+DYI +K Y LPH+ GR+A KRF KA+ PIVERL N
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLKPMY---LPHTGGRHAKKRFAKAEVPIVERLINR 68
Query: 308 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 487
+M +N GKK +A IVK AF+IIH TGENP+QVLV A+ N+ PRE++T I G
Sbjct: 69 VMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETTTIIYGGISY 128
Query: 488 RQAVDVSPLRR 520
+AVD SP RR
Sbjct: 129 HEAVDSSPQRR 139
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 134 bits (323), Expect = 2e-30
Identities = 68/131 (51%), Positives = 94/131 (71%)
Frame = +2
Query: 128 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 307
EI LF ++S +V+V+++SL+ YI++ + +PH+A KA+ PI ER S
Sbjct: 22 EINLFEKYSYEEVKVNNVSLRPYINLSRR--GIVPHAATTITKGTTGKARIPIAERFVCS 79
Query: 308 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 487
LM HGRN+GKK +A+ I + A IIH +T +NPLQVLV AI+NSGPRED+ RIGRAG++R
Sbjct: 80 LMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGRAGSMR 139
Query: 488 RQAVDVSPLRR 520
R +VDVSPL+R
Sbjct: 140 RTSVDVSPLKR 150
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 131 bits (317), Expect = 8e-30
Identities = 70/130 (53%), Positives = 85/130 (65%)
Frame = +2
Query: 131 IKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSL 310
I LFG+WS DV V D L+ YI +K LPH+ GRY + RF KA+ PIVERL N +
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPVI---LPHTEGRYQNTRFGKARIPIVERLINLM 95
Query: 311 MMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRR 490
M GRN GKK A IVK AF++I+ TG+NPLQV + AIIN+ PRE+ TRI G
Sbjct: 96 MRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRIIMGGIAYS 155
Query: 491 QAVDVSPLRR 520
+VDVSP RR
Sbjct: 156 VSVDVSPQRR 165
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 118 bits (284), Expect = 8e-26
Identities = 64/159 (40%), Positives = 95/159 (59%)
Frame = +2
Query: 44 EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 223
E+ D+ EA + +T + A KLFG+W ++ D S + Y++V
Sbjct: 4 EQPAEDETEEAAAESEDTQEVAANA-----KLFGKWDVAEIHYEDPSTRRYLAVTP---- 54
Query: 224 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 403
+ H+ GR+A K+F+K++ IVERL N LM G N GKK A++IV+ AF+I+H T EN
Sbjct: 55 -VAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDEN 113
Query: 404 PLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRR 520
P+QVLV+A+ N+ PRE++ R+ G QAVD +P RR
Sbjct: 114 PIQVLVSAVENAAPREETVRLKYGGISVPQAVDTAPQRR 152
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 115 bits (276), Expect = 8e-25
Identities = 62/131 (47%), Positives = 81/131 (61%)
Frame = +2
Query: 128 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 307
EIKLFG+W V V D SL+ +IS+ +PH+AGR + K F K + +VERL N
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISLNPVL---IPHTAGRNSKKMFDKNKMHVVERLANK 64
Query: 308 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 487
LM N GKK + I++ A I+ T ENP+QV+V A+ NSGPRE++TRI G
Sbjct: 65 LMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAF 124
Query: 488 RQAVDVSPLRR 520
Q+VDVSP RR
Sbjct: 125 LQSVDVSPSRR 135
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 115 bits (276), Expect = 8e-25
Identities = 55/129 (42%), Positives = 86/129 (66%)
Frame = +2
Query: 134 KLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 313
K+FG+W +V+V D+ ++ Y+S+ +PHS+G++A ++F K++ IVERL N+LM
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTPVI---VPHSSGKHARQQFNKSEISIVERLANNLM 62
Query: 314 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQ 493
N GKK + +R V+ AF+I++ T +NP+QVLV AI N+GPRE+ R+ G +
Sbjct: 63 RTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPK 122
Query: 494 AVDVSPLRR 520
AVD +P RR
Sbjct: 123 AVDTAPQRR 131
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 114 bits (274), Expect = 1e-24
Identities = 60/145 (41%), Positives = 90/145 (62%), Gaps = 2/145 (1%)
Frame = +2
Query: 92 ETMSLPQAADIPEIK--LFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 265
E + P+ P+ K LF +W +V+V+D SL Y+++ + +PHS G+++ + F
Sbjct: 5 EVKAQPEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQI---IPHSCGKFSRQEF 61
Query: 266 RKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 445
KA IVERL N LM N GKK +A+ IV+ AFE+I+ T NP++VLV AI N+GP
Sbjct: 62 NKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGP 121
Query: 446 REDSTRIGRAGTVRRQAVDVSPLRR 520
RE++ R+ G ++VD +PLRR
Sbjct: 122 REETVRLKYGGINVPKSVDTAPLRR 146
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 114 bits (274), Expect = 1e-24
Identities = 68/147 (46%), Positives = 88/147 (59%), Gaps = 16/147 (10%)
Frame = +2
Query: 128 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 307
EIK+ GRWS DV+V D SL+ YI+++ + LPH+ GR+A K F KA IVERL N
Sbjct: 17 EIKVMGRWSTEDVEVKDPSLKPYINLEPRL---LPHTHGRHAKKHFGKANVHIVERLINK 73
Query: 308 LMMHGRN----------------NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINS 439
+M G + N KK+ A +VK AF+II TG+NP+QVLV AI N+
Sbjct: 74 VMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENA 133
Query: 440 GPREDSTRIGRAGTVRRQAVDVSPLRR 520
PRED+T + G AVD+SPLRR
Sbjct: 134 APREDTTSVMFGGIRYHVAVDISPLRR 160
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 92.3 bits (219), Expect = 6e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +2
Query: 272 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 427
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 88.2 bits (209), Expect = 1e-16
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = +2
Query: 374 EIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRR 520
++ HLL +NPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRR
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRR 222
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 82.6 bits (195), Expect = 5e-15
Identities = 47/120 (39%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Frame = +2
Query: 164 VQVSDMSLQDYISVKEKYAKYLP-HSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKK 340
+Q+ D L YI++ YL + GR+++ K +ERL N+LM + GKK
Sbjct: 9 IQIKDQGLATYINL----TSYLNLDTGGRFSNYLSGKRNVNTIERLLNNLMRTEKWTGKK 64
Query: 341 LMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRR 520
A +++ AF+II T +NP+Q+LV+AI NS PRE+ TR+ G ++VDVSP RR
Sbjct: 65 YSAYKVMSQAFDIIATKTKQNPVQILVSAIENSAPREEVTRLKYGGIAVPKSVDVSPSRR 124
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 52.0 bits (119), Expect = 8e-06
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +2
Query: 38 MAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYIS 202
M+E D+ E V E + Q A++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 48.8 bits (111), Expect = 7e-05
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = -3
Query: 378 ISNACLTIRTAISFLPLFRPCIIREFVRRSTIGHWALRKRLCAYLPAE*GKYFAY 214
+S A LT+ A FLP+F P I F+ ST+G W L KRLC+ LP G+Y +
Sbjct: 1 MSKAFLTMWYARCFLPMFLPGRITLFISLSTMGTWVLPKRLCSCLPPVCGRYTGF 55
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 45.6 bits (103), Expect = 7e-04
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +2
Query: 257 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 436
KRF +A L + L+ +GKK +A IV AFEII + T E+PL V AI N
Sbjct: 9 KRFPEADSTYNSYLVSLLITRILKSGKKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRN 68
Query: 437 SGP--REDSTRIGRAGTVRRQAVDVSPLR 517
+ P + RIG G+ + V+VS R
Sbjct: 69 ASPVVEVKARRIG--GSTYQVPVEVSGFR 95
>UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein S7;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein S7 - Candida albicans (Yeast)
Length = 251
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/87 (29%), Positives = 45/87 (51%)
Frame = +2
Query: 245 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 424
+YA+K+ P V+ LTN +M H GKK A ++V A I+ L ++P++VL
Sbjct: 105 KYANKKIPLRSDPTVDNLTNLIMRH----GKKAKAQKVVSRALYIVQLKLRKDPIEVLRE 160
Query: 425 AIINSGPREDSTRIGRAGTVRRQAVDV 505
+ GP +T+ G +++ V +
Sbjct: 161 TLDKLGPLV-NTKTMSTGVAKKRVVPI 186
>UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albicans
IPF3361; n=2; Saccharomycetaceae|Rep: Similar to
CA4785|IPF3361 Candida albicans IPF3361 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 263
Score = 40.3 bits (90), Expect = 0.026
Identities = 25/91 (27%), Positives = 47/91 (51%)
Frame = +2
Query: 248 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 427
+A+KR P ++ TN +M +GKK A +I+ A I++L T ++PL +L
Sbjct: 118 FANKRIPLPSNPTIDNFTNLIM----RDGKKSKAQKILSRALYIVYLKTRKDPLVILEET 173
Query: 428 IINSGPREDSTRIGRAGTVRRQAVDVSPLRR 520
+ P +T++ + G + + V PL++
Sbjct: 174 LDKMAPLM-ATKVQKTGAAKNRTVPY-PLKK 202
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 37.5 bits (83), Expect = 0.18
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +2
Query: 287 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 445
V+ L N +M +GKK A +IV A II TGENP+ VL AI P
Sbjct: 126 VQHLVNLIM----RDGKKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISP 174
>UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7;
n=94; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Zea mays (Maize)
Length = 156
Score = 37.5 bits (83), Expect = 0.18
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +2
Query: 251 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 430
A KR K+ RL N ++ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAI 66
Query: 431 INSGPRED-STRIGRAGTVRRQAVDV 505
P TR + G+ R+ +++
Sbjct: 67 RRVTPNIGVKTRRNKKGSTRKVPIEI 92
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 37.1 bits (82), Expect = 0.24
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 293 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 430
RL N L + GKK +A RI+ +AF+II TGE+ + V +AI
Sbjct: 21 RLVNMLTVRILKEGKKHLAQRIIYNAFDIIKQRTGEDAILVFESAI 66
>UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n=3;
Chlorophyceae|Rep: Chloroplast 30S ribosomal protein S7
- Stigeoclonium helveticum (Green alga)
Length = 174
Score = 36.7 bits (81), Expect = 0.32
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 281 PIVERLTNSLMMHG-RNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDS 457
PI +++ ++++ NGKK +A RIV F I +NP++V A+ N PR +
Sbjct: 16 PIYNKVSVHMLVNRILKNGKKSIAYRIVYSVFRKISETMNQNPVEVWEKALNNVKPRVEV 75
Query: 458 TRIGRAGTVRR 490
RAG++++
Sbjct: 76 KPRRRAGSIQQ 86
>UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. CcI3|Rep: Putative uncharacterized protein -
Frankia sp. (strain CcI3)
Length = 374
Score = 36.3 bits (80), Expect = 0.43
Identities = 29/99 (29%), Positives = 42/99 (42%)
Frame = +2
Query: 182 SLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIV 361
+LQ + + K A P +A R R + TN L G +G +A+
Sbjct: 93 NLQQELEYRNKVAPVAPAAADRTLRMRVSLHVGSTTDSGTNRL---GDGSGAARIALHRQ 149
Query: 362 KHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 478
A + HLL NP LV AI++S ED+ G +G
Sbjct: 150 LDAAAVRHLLEESNPRTTLVAAILSSRAYEDAVLSGYSG 188
>UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 299
Score = 36.3 bits (80), Expect = 0.43
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +2
Query: 281 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 445
P +E LTN LM +GKK A R + II +T NPL ++ AI + P
Sbjct: 164 PTLEFLTNLLM----KDGKKAQAQRFITRTLSIISSVTNSNPLPLIHDAIYKAAP 214
>UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD+]
2, mitochondrial precursor; n=37; Saccharomycetales|Rep:
Glycerol-3-phosphate dehydrogenase [NAD+] 2,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 440
Score = 35.9 bits (79), Expect = 0.56
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +2
Query: 26 KVPIMAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISV 205
KV ++ NW +A+ V+ E L PE+++ W +D ++ D +L D I+
Sbjct: 85 KVTVIGSGNWGTTIAK---VIAENTELHSHIFEPEVRM---W-VFDEKIGDENLTDIINT 137
Query: 206 KEKYAKYLPH 235
+ + KYLP+
Sbjct: 138 RHQNVKYLPN 147
>UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyces
cerevisiae YJR113c RSM7; n=2; Saccharomycetales|Rep:
Similarities with sp|P47150 Saccharomyces cerevisiae
YJR113c RSM7 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 274
Score = 35.5 bits (78), Expect = 0.74
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 281 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 445
P V+ +TN +M H GKK A +I+ A +H T ++P+++L A+ + P
Sbjct: 139 PTVQHVTNMIMRH----GKKDRAQKIISRALYFLHCKTRKDPVELLKKALDDMAP 189
>UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 468
Score = 35.1 bits (77), Expect = 0.98
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Frame = +2
Query: 17 SNRKVPIMAEENWNDDVAEAGSVVVE-TMSLPQAADIPEIKLF--GRWSCYDVQVSDMSL 187
S+ + ++AEENW +A+AG + + MS+ +D+ E+ L+ GR + ++++ D
Sbjct: 201 SDEEEALVAEENWGQSIADAGGYMHKGKMSVWARSDMDEMCLWGAGRGNIGEIELQDH-- 258
Query: 188 QDYISVKEKYAKYLPHSAG 244
+ Y S + K+ + P G
Sbjct: 259 KQYPSSEFKFKTFTPPKTG 277
>UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|Rep:
30S ribosomal protein S7 - Elegia fenestrata
Length = 217
Score = 34.7 bits (76), Expect = 1.3
Identities = 27/87 (31%), Positives = 40/87 (45%)
Frame = +2
Query: 251 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 430
A KR K+ RL N ++ +GKK +A +I A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIYRNRLVNMVVNRIMKHGKKALAYQIFYRAAQKIQQ-TETNPLFVLREAI 65
Query: 431 INSGPREDSTRIGRAGTVRRQAVDVSP 511
P+ +AG R+ +++ P
Sbjct: 66 RRITPQIGVKARRKAGLTRQVPIEIQP 92
>UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211;
Bacteria|Rep: 30S ribosomal protein S7 - Streptococcus
pneumoniae
Length = 156
Score = 34.7 bits (76), Expect = 1.3
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 284 IVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTR 463
+V RL N +M+ +GK+ A IV AFE I TG + L+V TA+ N P + R
Sbjct: 22 LVTRLINRVML----DGKRGTAASIVYGAFEQIKEATGNDALEVFETAMENIMPVLE-VR 76
Query: 464 IGRAGTVRRQA-VDVSPLRR 520
R G Q V V P RR
Sbjct: 77 ARRVGGSNYQVPVKVRPERR 96
>UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor;
n=1; Desulfuromonas acetoxidans DSM 684|Rep: Multicopper
oxidase, type 3 precursor - Desulfuromonas acetoxidans
DSM 684
Length = 782
Score = 33.5 bits (73), Expect = 3.0
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 426 PLSTLDPVKIRLGSVVRVQFVVKPLMFHP 512
PLS D ++IR G VVR V + +M+HP
Sbjct: 507 PLSAGDDIRIRQGEVVRFMMVNRTMMYHP 535
>UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 589
Score = 33.1 bits (72), Expect = 4.0
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +2
Query: 290 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENP--LQVLVTAIINSGPREDSTR 463
ER ++ L+ + +K + V++ KH FEI+H + G P + VL T +++S R+ +
Sbjct: 477 ERNSSKLLSQRQKQYQKFLHVKM-KHVFEILHSIEGNKPYTMTVLSTLVVDS-LRDGNNP 534
Query: 464 IG 469
IG
Sbjct: 535 IG 536
>UniRef50_A6G0N7 Cluster: Serine/threonine protein kinase; n=1;
Plesiocystis pacifica SIR-1|Rep: Serine/threonine
protein kinase - Plesiocystis pacifica SIR-1
Length = 592
Score = 32.3 bits (70), Expect = 6.9
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 59 DDVAEAGSVVVETMSLPQAADIPEIKLFGR 148
DD+ G VV++ +SL QAAD +++LF R
Sbjct: 56 DDLDSGGPVVIKELSLAQAADWKQVELFER 85
>UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7;
n=191; Magnoliophyta|Rep: Chloroplast 30S ribosomal
protein S7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 155
Score = 32.3 bits (70), Expect = 6.9
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +2
Query: 293 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 430
RL N L+ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 21 RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAI 66
>UniRef50_A6SU82 Cluster: DNA topoisomerase III; n=57;
Betaproteobacteria|Rep: DNA topoisomerase III -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 881
Score = 31.9 bits (69), Expect = 9.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -2
Query: 433 DNGSHEYLQRVFSS*QVNNFKRMFDNTYGHQFFAIVPT 320
+N H++ +++ + V KR+FDNT FAI+PT
Sbjct: 353 NNNYHQFAKQITDNKWVKPNKRIFDNTKISDHFAIIPT 390
>UniRef50_A7EQB6 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 573
Score = 31.9 bits (69), Expect = 9.2
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +3
Query: 144 ADGVATMCKSLICLCRTTFPLKRSTQNIYLIQLAGMHTSVSV 269
ADGVAT+ +L+ + +T +TQN YLI + G T+V V
Sbjct: 351 ADGVATVL-TLVSIAQTQVVEFSATQNTYLIMVQGGSTTVGV 391
>UniRef50_A6RZ06 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 569
Score = 31.9 bits (69), Expect = 9.2
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +3
Query: 144 ADGVATMCKSLICLCRTTFPLKRSTQNIYLIQLAGMHTSVSV 269
ADGVAT+ +L+ + +T +TQN YLI + G T+V V
Sbjct: 350 ADGVATVL-TLVSIAQTQVVEFSATQNTYLIMVQGGSTTVGV 390
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,302,527
Number of Sequences: 1657284
Number of extensions: 10578442
Number of successful extensions: 26430
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 25741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26413
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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