Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304F07f
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 23 1.2
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 21 5.0
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 6.6
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 6.6
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 21 8.7
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 21 8.7
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 21 8.7
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 21 8.7
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 21 8.7
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 21 8.7
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 23.4 bits (48), Expect = 1.2
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 312 PTNIVPNVFTPQPLRQTIPLPTNLPNRNIN 401
PT + N + P P +PLP P IN
Sbjct: 166 PTGFLCNNYPPLPQVPPLPLPPIFPPTMIN 195
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 21.4 bits (43), Expect = 5.0
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = +3
Query: 276 QQTHGQQLLRPSPTNIVPNVFTPQPLRQTIPLPTNLP 386
QQ SPT + + +P +++ PT +P
Sbjct: 189 QQNKSASRTTTSPTKVKASKASPAAAPRSVATPTGIP 225
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +1
Query: 4 INNK*GVYRLQHYKISKMTKRHHSS 78
+NN G Y++ Y M HH +
Sbjct: 330 MNNMAGTYQMTGYSAMGMAAPHHQN 354
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.0 bits (42), Expect = 6.6
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +3
Query: 240 ANGLPKKVIPLYQQTHGQQLLRPSPTNIVPNVFTPQP 350
+ G+P++ I + +GQ P N N P P
Sbjct: 1628 SEGVPRRKIVMGMPLYGQSFRLEKPENHGLNAKAPGP 1664
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.0 bits (42), Expect = 6.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 144 HNEDGENIEDVDKRDVQVYQ 203
HNE IE V K D +YQ
Sbjct: 370 HNEAVLRIESVRKEDKGMYQ 389
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +2
Query: 245 WTSQKGYTTLSTDSWP 292
W+ Q G +L T WP
Sbjct: 513 WSEQVGPDSLETRIWP 528
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.6 bits (41), Expect = 8.7
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 309 SPTNIVPNVFTPQPLRQTIPLPT 377
S T +VP QPL QT L T
Sbjct: 222 SGTMLVPWALMEQPLAQTKKLAT 244
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.6 bits (41), Expect = 8.7
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 309 SPTNIVPNVFTPQPLRQTIPLPT 377
S T +VP QPL QT L T
Sbjct: 222 SGTMLVPWALMEQPLAQTKKLAT 244
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.6 bits (41), Expect = 8.7
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 309 SPTNIVPNVFTPQPLRQTIPLPT 377
S T +VP QPL QT L T
Sbjct: 222 SGTMLVPWALMEQPLAQTKKLAT 244
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 183 RDVQVYQAPLVAAFT 227
++ QVY P +A+FT
Sbjct: 306 KNQQVYDVPWIASFT 320
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.6 bits (41), Expect = 8.7
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 309 SPTNIVPNVFTPQPLRQTIPLPT 377
S T +VP QPL QT L T
Sbjct: 222 SGTMLVPWALMEQPLAQTKKLAT 244
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.6 bits (41), Expect = 8.7
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 309 SPTNIVPNVFTPQPLRQTIPLPT 377
S T +VP QPL QT L T
Sbjct: 222 SGTMLVPWALMEQPLAQTKKLAT 244
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 183 RDVQVYQAPLVAAFT 227
++ QVY P +A+FT
Sbjct: 306 KNKQVYDVPWIASFT 320
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,405
Number of Sequences: 336
Number of extensions: 2033
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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