Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304F07f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC132726-1|AAI32727.1|  386|Homo sapiens LOC441476 protein protein.    31   3.2  
BC033939-1|AAH33939.2|  331|Homo sapiens LOC441476 protein protein.    31   3.2  
AK097565-1|BAC05104.1|  389|Homo sapiens protein ( Homo sapiens ...    31   3.2  
AK056918-1|BAB71310.1|  126|Homo sapiens protein ( Homo sapiens ...    31   3.2  
BC133019-1|AAI33020.1| 1427|Homo sapiens CCDC144A protein protein.     29   9.9  

>BC132726-1|AAI32727.1|  386|Homo sapiens LOC441476 protein protein.
          Length = 386

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 246 GLPKKVIPLYQQTHGQQLLRPSPTNIVPNVFTPQPLRQTIPLPT 377
           G P++ +P Y QT  + LL   P  I  ++  P P R  +P P+
Sbjct: 73  GTPQESLPTYTQTLRELLLEQRPL-ITADLEVPSPTRYQVPSPS 115


>BC033939-1|AAH33939.2|  331|Homo sapiens LOC441476 protein protein.
          Length = 331

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 246 GLPKKVIPLYQQTHGQQLLRPSPTNIVPNVFTPQPLRQTIPLPT 377
           G P++ +P Y QT  + LL   P  I  ++  P P R  +P P+
Sbjct: 73  GTPQESLPTYTQTLRELLLEQRPL-ITADLEVPSPTRYQVPSPS 115


>AK097565-1|BAC05104.1|  389|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40246 fis, clone TESTI2024009. ).
          Length = 389

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 246 GLPKKVIPLYQQTHGQQLLRPSPTNIVPNVFTPQPLRQTIPLPT 377
           G P++ +P Y QT  + LL   P  I  ++  P P R  +P P+
Sbjct: 73  GTPQESLPTYTQTLRELLLEQRPL-ITADLEVPSPTRYQVPSPS 115


>AK056918-1|BAB71310.1|  126|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32356 fis, clone PROST2007974, weakly similar to
           ANTER-SPECIFIC PROLINE-RICH PROTEIN APG. ).
          Length = 126

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +3

Query: 294 QLLRPSPTNIVPNVFTPQPLRQTIPLPTNLPN 389
           Q  RP   N +P V  PQP  Q++PLP +LP+
Sbjct: 2   QKQRPREMNSLPGV--PQPQPQSLPLPPSLPS 31


>BC133019-1|AAI33020.1| 1427|Homo sapiens CCDC144A protein protein.
          Length = 1427

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 304  GLHRLISCLTYSHLN-H*DKLSHCQPIYLTET*ILKMNL 417
            GLHR+  C ++S  + H    S CQP +L    +L MNL
Sbjct: 1386 GLHRIPQCSSFSSSSLHLLLCSICQPFFLILQLLLNMNL 1424


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,156,535
Number of Sequences: 237096
Number of extensions: 1283711
Number of successful extensions: 2979
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2977
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)