Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304F07f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3154|AAF55995.2|  761|Drosophila melanogaster CG13847-P...    67   2e-11
U22182-2|AAB03639.1|  791|Drosophila melanogaster unknown protein.     28   8.8  
AY061036-1|AAL28584.1|  101|Drosophila melanogaster HL07357p pro...    28   8.8  
AL031366-4|CAA20518.1|  773|Drosophila melanogaster EG:100G7.2,F...    28   8.8  

>AE014297-3154|AAF55995.2|  761|Drosophila melanogaster CG13847-PA
           protein.
          Length = 761

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
 Frame = +3

Query: 132 PKPTHNEDGENIEDVDKRDVQVYQAPLVAAFTVHQDANGLPKKVIPLY--QQTHGQ--QL 299
           P+PTHNEDGENIE VDK+D+++ +APLV AFTV  D  G  ++  PL    Q H +    
Sbjct: 267 PRPTHNEDGENIELVDKQDIRIQEAPLVTAFTVDLDERGTAQRFRPLLAGNQLHQRTANF 326

Query: 300 LRPSPTNIVPNV---FTPQPLRQTIPLPTNLPNR 392
             P     +P++    T   + +T P  T LP +
Sbjct: 327 AAPQQQQQLPHIGPTITKLNVLETEPPATQLPTQ 360


>U22182-2|AAB03639.1|  791|Drosophila melanogaster unknown protein.
          Length = 791

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
 Frame = +3

Query: 135 KPTHNEDGENI--EDVDKRDVQVYQAPLVAAFTVHQDANGLPKKVIPLYQQTHGQQLLRP 308
           KP   E  E +  E+V   +++  + P        +     P+K  P  ++   ++  + 
Sbjct: 711 KPKEEEQKEKLPKEEVQLEEIKK-EEPQKEELQKEEPQKEEPQKEEPRKEEPQKEEPQKE 769

Query: 309 SPTNIVPNVFTPQPLRQT 362
            P    P V TPQPL Q+
Sbjct: 770 EPQKEEPKVETPQPLEQS 787


>AY061036-1|AAL28584.1|  101|Drosophila melanogaster HL07357p
           protein.
          Length = 101

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 246 GLPKKVIPLYQQTHGQQLLRPSPTNIVPNVF 338
           G PKK I +Y +    Q  +P PT + P +F
Sbjct: 22  GEPKKSIYIYIRKRSLQARQPLPTPVFPTIF 52


>AL031366-4|CAA20518.1|  773|Drosophila melanogaster
           EG:100G7.2,FBgn0014097;anon-3Cb protein.
          Length = 773

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
 Frame = +3

Query: 135 KPTHNEDGENI--EDVDKRDVQVYQAPLVAAFTVHQDANGLPKKVIPLYQQTHGQQLLRP 308
           KP   E  E +  E+V   +++  + P        +     P+K  P  ++   ++  + 
Sbjct: 693 KPKEEEQKEKLPKEEVQLEEIKK-EEPQKEELQKEEPQKEEPQKEEPRKEEPQKEEPQKE 751

Query: 309 SPTNIVPNVFTPQPLRQT 362
            P    P V TPQPL Q+
Sbjct: 752 EPQKEEPKVETPQPLEQS 769


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,194,914
Number of Sequences: 53049
Number of extensions: 374134
Number of successful extensions: 1105
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)