Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304F07f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 24 1.1
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 24 1.1
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 24 1.1
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 24 1.1
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 1.9
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 1.9
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 1.9
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 1.9
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 4.4
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 21 5.8
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 5.8
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 5.8
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 5.8
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 7.7
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 7.7
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 7.7
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 7.7
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 7.7
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.1
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 258 KVIPLYQQTHGQQLLRPSPTNIVPNVFTPQPLRQTIPLPTNLPN-RNINTQNEF 416
K + Y + +Q+ P P I F P+PL I + +P R+I F
Sbjct: 108 KKLQYYNINYIEQIPIPVPVPIYCGNFPPRPLGPWISIQEQIPRFRHIGPSTPF 161
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.1
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 258 KVIPLYQQTHGQQLLRPSPTNIVPNVFTPQPLRQTIPLPTNLPN-RNINTQNEF 416
K + Y + +Q+ P P I F P+PL I + +P R+I F
Sbjct: 108 KKLQYYNINYIEQIPIPVPVPIYCGNFPPRPLGPWISIQEQIPRFRHIGPSTPF 161
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.1
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 258 KVIPLYQQTHGQQLLRPSPTNIVPNVFTPQPLRQTIPLPTNLPN-RNINTQNEF 416
K + Y + +Q+ P P I F P+PL I + +P R+I F
Sbjct: 108 KKLQYYNINYIEQIPIPVPVPIYCGNFPPRPLGPWISIQEQIPRFRHIGPSTPF 161
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.1
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 258 KVIPLYQQTHGQQLLRPSPTNIVPNVFTPQPLRQTIPLPTNLPN-RNINTQNEF 416
K + Y + +Q+ P P I F P+PL I + +P R+I F
Sbjct: 108 KKLQYYNINYIEQIPIPVPVPIYCGNFPPRPLGPWISIQEQIPRFRHIGPSTPF 161
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.0 bits (47), Expect = 1.9
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 225 TVHQDANGLPKKVIPLYQQTHGQQLLRPSPTNIVPNVFTPQPLRQTIPLPTNLP 386
T+H + N K + Y + +Q+ P P I F P+P+ I + +P
Sbjct: 311 TIHNNNN---YKKLQYYNINYIEQIPVPVPIPIYCGNFPPRPMGPWISIQEQIP 361
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.0 bits (47), Expect = 1.9
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 225 TVHQDANGLPKKVIPLYQQTHGQQLLRPSPTNIVPNVFTPQPLRQTIPLPTNLP 386
T+H + N K + Y + +Q+ P P I F P+P+ I + +P
Sbjct: 322 TIHNNNN---YKKLQYYNINYIEQIPVPVPIPIYCGNFPPRPMGPWISIQEQIP 372
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.0 bits (47), Expect = 1.9
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 225 TVHQDANGLPKKVIPLYQQTHGQQLLRPSPTNIVPNVFTPQPLRQTIPLPTNLP 386
T+H + N K + Y + +Q+ P P I F P+P+ I + +P
Sbjct: 322 TIHNNNN---YKKLQYYNINYIEQIPVPVPIPIYCGNFPPRPMGPWISIQEQIP 372
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.0 bits (47), Expect = 1.9
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 225 TVHQDANGLPKKVIPLYQQTHGQQLLRPSPTNIVPNVFTPQPLRQTIPLPTNLP 386
T+H + N K + Y + +Q+ P P I F P+P+ I + +P
Sbjct: 311 TIHNNNN---YKKLQYYNINYIEQIPVPVPIPIYCGNFPPRPMGPWISIQEQIP 361
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 4.4
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +3
Query: 273 YQQTHGQQLLRPSPTNIVPNVFTPQPLRQTIPLPTNLPN-RNINTQNEF 416
Y + +Q+ P P I F P+P+ I + +P R+I F
Sbjct: 111 YNINYIEQIPIPVPVPIYCGNFPPRPMGPWISIQEQIPRFRHIGPSTPF 159
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 481 CVSCSYSKVNK 513
C CSYS VNK
Sbjct: 19 CEKCSYSCVNK 29
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.4 bits (43), Expect = 5.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 297 LLRPSPTNIVPNVFTPQPLRQTIPLPTNL 383
+L P +N V V +P PL IP+ L
Sbjct: 434 ILTPPSSNPVSPVPSPDPLDLAIPVRETL 462
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 88 ESFCLNDAFLSFLIF 44
ES C+ F SFL+F
Sbjct: 76 ESHCMTITFASFLLF 90
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 5.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 330 NVFTPQPLRQTIPLPTNLPNRNINTQNEFI 419
NV QPL +IP P + N NT ++ I
Sbjct: 753 NVNLWQPLSVSIPPPPSAQNVPQNTNSQAI 782
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.0 bits (42), Expect = 7.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 373 GNGIVCLSG*GVNTLGTILVGEG 305
GN + + G+N LG I+ G G
Sbjct: 347 GNHVKLYTKQGLNVLGNIVQGNG 369
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.0 bits (42), Expect = 7.7
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +3
Query: 231 HQDANGLPKKVIPLYQQTHGQQLLRPSPTNIVPNVFTPQPLRQTIPLPTNLP 386
+ + N KK+ Y + +Q+ P P I F P+P+ I + +P
Sbjct: 96 YNNNNNYNKKLY--YNINYIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIP 145
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.0 bits (42), Expect = 7.7
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +3
Query: 231 HQDANGLPKKVIPLYQQTHGQQLLRPSPTNIVPNVFTPQPLRQTIPLPTNLP 386
+ + N KK+ Y + +Q+ P P I F P+P+ I + +P
Sbjct: 96 YNNDNNYNKKLY--YNINYIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIP 145
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.0 bits (42), Expect = 7.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 373 GNGIVCLSG*GVNTLGTILVGEG 305
GN + + G+N LG I+ G G
Sbjct: 347 GNHVKLYTKQGLNVLGNIVQGNG 369
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.0 bits (42), Expect = 7.7
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +3
Query: 231 HQDANGLPKKVIPLYQQTHGQQLLRPSPTNIVPNVFTPQPLRQTIPLPTNLP 386
+ + N KK+ Y + +Q+ P P I F P+P+ I + +P
Sbjct: 334 YNNNNNYNKKLY--YNINYIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIP 383
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,927
Number of Sequences: 438
Number of extensions: 2310
Number of successful extensions: 23
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -