Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304F06f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9G8N7 Cluster: Haem lyase; n=1; Naegleria gruberi|Rep:...    34   2.3  
UniRef50_A5K7K3 Cluster: D123 (Regulator of eIF2), putative; n=1...    32   6.9  
UniRef50_Q6F0I0 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  
UniRef50_Q4HR88 Cluster: Acylneuraminate cytidylyltransferase, p...    32   9.2  
UniRef50_Q2PDM3 Cluster: CG33978-PA; n=1; Drosophila melanogaste...    32   9.2  

>UniRef50_Q9G8N7 Cluster: Haem lyase; n=1; Naegleria gruberi|Rep:
           Haem lyase - Naegleria gruberi
          Length = 474

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
 Frame = +2

Query: 227 VCLFYYYENS*INIIAKSCSS*ITKF*YISIKTFN-YNNLLVPYSVTYILYEIINRACYK 403
           +C+F+Y  N  I  I  +    I  + Y  +K  N YNN +    + YILY I N    +
Sbjct: 325 ICIFFYINNIYIYTILYT----IIIYTYTIVKKINMYNNHITYIIIIYILYSITNE-INE 379

Query: 404 YTLKSVNFTEKK-TFTESILIITPVQAVRYFNE 499
            T++  N  E + ++ + I I   +  + Y N+
Sbjct: 380 ITIQIANTYENEFSYNKIIEIDININYIEYINK 412


>UniRef50_A5K7K3 Cluster: D123 (Regulator of eIF2), putative; n=1;
           Plasmodium vivax|Rep: D123 (Regulator of eIF2), putative
           - Plasmodium vivax
          Length = 761

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +3

Query: 273 LNHAHLKLLSF-NIFPLKRSIITTY*FRIRSHTFYMKSLTELVTSIH*NRLILQKKKHLQ 449
           +N+ +LK  SF N F L+ + +      ++S T   K+L E  TS   N LIL K  HL 
Sbjct: 486 VNYKNLKKGSFVNSFSLEVNTLYDALLMLKSSTDVYKTLKENQTSSENNHLILSKYVHLN 545

Query: 450 NLFL 461
             FL
Sbjct: 546 LCFL 549


>UniRef50_Q6F0I0 Cluster: Putative uncharacterized protein; n=1;
           Mesoplasma florum|Rep: Putative uncharacterized protein
           - Mesoplasma florum (Acholeplasma florum)
          Length = 625

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 21/65 (32%), Positives = 35/65 (53%)
 Frame = +3

Query: 162 ELGSSECKNKLLHDKQSVFIYKFVYFIIMKIAK*I**LNHAHLKLLSFNIFPLKRSIITT 341
           E  + +  NKLL  ++++F YK   FI+ K  K +  +    L+L S  +F  KR+I T 
Sbjct: 226 EFNTKKSNNKLLRKRKNLFEYKQTKFIVEKQLKFL-NIRLNKLRLESILLFFRKRTISTQ 284

Query: 342 Y*FRI 356
           + F +
Sbjct: 285 FKFEL 289


>UniRef50_Q4HR88 Cluster: Acylneuraminate cytidylyltransferase,
           putative; n=2; Campylobacter|Rep: Acylneuraminate
           cytidylyltransferase, putative - Campylobacter
           upsaliensis RM3195
          Length = 236

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +2

Query: 329 NYNNLLVPYSVTYILYEIINRACYKYTLKSVNFTEKKTFT--ESILIITPVQAVRYFNEL 502
           NY++L+  Y   + L +      +K   K +N  + K F    + +I TPV+ +  FN  
Sbjct: 125 NYDSLIAIYKFRHFLLDEKGPFNFKPGKKHLNSQDLKPFDFFTNGIIYTPVENIAKFNYF 184

Query: 503 YGP 511
           YGP
Sbjct: 185 YGP 187


>UniRef50_Q2PDM3 Cluster: CG33978-PA; n=1; Drosophila
            melanogaster|Rep: CG33978-PA - Drosophila melanogaster
            (Fruit fly)
          Length = 4056

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +2

Query: 350  PYSVTYILYEIINRACYKYTLKSVNFTEKKTFTESILIITPVQAVRYFN 496
            P + TY  Y +  R  Y     S++ T KK FTE +++  P     Y N
Sbjct: 2597 PSTKTYFSYILFTRTLYDELGNSIHITRKKNFTE-VVLTQPFHDSTYMN 2644


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,083,586
Number of Sequences: 1657284
Number of extensions: 6612761
Number of successful extensions: 15050
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15047
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)