Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304F06f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   6.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 435 FSVKLTDFNVYL*QALLMISYKMYVT 358
           F  KL +F+V L    LMI YK   T
Sbjct: 749 FMTKLLEFDVKLQSDRLMIDYKTQKT 774


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = +2

Query: 206 TIRFYIQVCLFYYY 247
           T+   + VC++Y+Y
Sbjct: 249 TVHLLLLVCIYYFY 262


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 426 LQKKKHLQNLFLSLRPYKLFDILTSS 503
           +QKK  L+N+F    P +L  IL SS
Sbjct: 88  VQKKHILKNVFGVAYPGELLAILGSS 113


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 426 LQKKKHLQNLFLSLRPYKLFDILTSS 503
           +QKK  L+N+F    P +L  IL SS
Sbjct: 88  VQKKHILKNVFGVAYPGELLAILGSS 113


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +2

Query: 395 CYKYTLKSVNFTEKKTFTESILIITPVQAVRYFNELYGP 511
           C++   K    ++K  FT+ I ++  ++  R F++   P
Sbjct: 761 CWQSNCKKGASSDKPNFTKLIQVVPTMELRREFDKQKPP 799


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,003
Number of Sequences: 336
Number of extensions: 2030
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)