Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304F06f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99942-9|CAB17073.3|  675|Caenorhabditis elegans Hypothetical pr...    30   0.87 
AY652945-1|AAT73712.1|  675|Caenorhabditis elegans guanylate cyc...    30   0.87 
AL008867-4|CAD56232.2|  675|Caenorhabditis elegans Hypothetical ...    30   0.87 
Z77131-3|CAB00855.1|  156|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z50863-2|CAA90737.1|  351|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF040643-7|AAM98035.1|  314|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z99942-9|CAB17073.3|  675|Caenorhabditis elegans Hypothetical
           protein C46E1.2 protein.
          Length = 675

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 344 LVPYSVTYILYEIINRACYKYTLKSVNFTEKKTFTESILIITPVQAVRYFNELY 505
           ++P SV   L + ++    +Y   +V FT+  TF + + + TP   V   NEL+
Sbjct: 426 MLPPSVAQQLKQGLSVEAREYEEATVMFTDVPTFQQIVPLCTPKDIVHLLNELF 479


>AY652945-1|AAT73712.1|  675|Caenorhabditis elegans guanylate
           cyclase-like protein protein.
          Length = 675

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 344 LVPYSVTYILYEIINRACYKYTLKSVNFTEKKTFTESILIITPVQAVRYFNELY 505
           ++P SV   L + ++    +Y   +V FT+  TF + + + TP   V   NEL+
Sbjct: 426 MLPPSVAQQLKQGLSVEAREYEEATVMFTDVPTFQQIVPLCTPKDIVHLLNELF 479


>AL008867-4|CAD56232.2|  675|Caenorhabditis elegans Hypothetical
           protein C46E1.2 protein.
          Length = 675

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 344 LVPYSVTYILYEIINRACYKYTLKSVNFTEKKTFTESILIITPVQAVRYFNELY 505
           ++P SV   L + ++    +Y   +V FT+  TF + + + TP   V   NEL+
Sbjct: 426 MLPPSVAQQLKQGLSVEAREYEEATVMFTDVPTFQQIVPLCTPKDIVHLLNELF 479


>Z77131-3|CAB00855.1|  156|Caenorhabditis elegans Hypothetical
           protein C54C6.4 protein.
          Length = 156

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -2

Query: 178 SEEPSSAFILCHLSLHYW*KLSIEVCESSIY*HLYCFFV*NLL 50
           S  P S  +  +LSLHY+   +I +  S +Y   +CFF   LL
Sbjct: 89  SNMPKSPQLCSNLSLHYFCMSNIRMTFSFVY---FCFFCFRLL 128


>Z50863-2|CAA90737.1|  351|Caenorhabditis elegans Hypothetical
           protein C14H10.4 protein.
          Length = 351

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +2

Query: 260 INIIAKS--CSS*ITKF*YISIKTFNYNNLLVPYSVTYILYEII 385
           +NI +K+  C+S +T F  I + TF   NL+  Y    +++ ++
Sbjct: 7   VNIFSKNGFCASFLTNFFVIYLTTFFVKNLIGTYKKMILIFSLL 50


>AF040643-7|AAM98035.1|  314|Caenorhabditis elegans Hypothetical
           protein F14D2.12 protein.
          Length = 314

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 356 SVTYILYEIINRACYKYTLKSVNFTEKKTFTESILIITPVQ 478
           S+T     IIN++   YT K +NF EKK     I+++   Q
Sbjct: 126 SITVEARVIINKSIGFYTPKLMNFDEKKKEYSDIVVLVDGQ 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,189,770
Number of Sequences: 27780
Number of extensions: 169894
Number of successful extensions: 416
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 416
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)