Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304F06f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    29   0.038
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   3.3  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    22   4.4  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    22   4.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   7.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   7.7  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   7.7  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   7.7  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 28.7 bits (61), Expect = 0.038
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 395 CYKYTLKSVNFTEKKTFTESILIITPVQAVRYFNELY 505
           C  +   S+ F++  TFTE    ITP++ V   N +Y
Sbjct: 417 CEMFDSVSILFSDVVTFTEICSRITPMEVVSMLNAMY 453


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 159 AELGSSECKNKLLHDKQSVFI 221
           AE    + KNKL+ + ++VFI
Sbjct: 186 AETLDEDTKNKLIEESKTVFI 206


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 311 ISIKTFNYNNLLVPYSVTYILYEIIN 388
           IS   +NY N    Y+   + Y IIN
Sbjct: 304 ISSNNYNYKNYNNNYNSKKLYYNIIN 329


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 311 ISIKTFNYNNLLVPYSVTYILYEIIN 388
           IS   +NY N    Y+   + Y IIN
Sbjct: 315 ISSNNYNYKNYNNNYNSKKLYYNIIN 340


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 141 KWHNINAELG 170
           KWHNI +E G
Sbjct: 349 KWHNIYSEKG 358


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 141 KWHNINAELG 170
           KWHNI +E G
Sbjct: 349 KWHNIYSEKG 358


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 260 FSYFHNNKINKLVYKN 213
           ++Y +NN   KL YKN
Sbjct: 104 YNYNNNNYNKKLYYKN 119


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 260 FSYFHNNKINKLVYKN 213
           + Y +NN   KL YKN
Sbjct: 329 YKYNYNNYNKKLYYKN 344


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,998
Number of Sequences: 438
Number of extensions: 2193
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)