Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304F05f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14608| Best HMM Match : AhpC-TSA (HMM E-Value=0) 221 2e-58
SB_22073| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 1e-30
SB_29430| Best HMM Match : AhpC-TSA (HMM E-Value=0.00012) 98 3e-21
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_49729| Best HMM Match : Vps54 (HMM E-Value=3.7) 30 1.0
SB_7173| Best HMM Match : dDENN (HMM E-Value=1.5e-08) 29 2.3
SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_41164| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_37636| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_7856| Best HMM Match : F5_F8_type_C (HMM E-Value=3.6e-11) 28 5.4
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_17596| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_13940| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_57709| Best HMM Match : RVT_1 (HMM E-Value=0.00081) 27 9.4
SB_13227| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_8778| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_36665| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_31170| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_27396| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_14500| Best HMM Match : Vicilin_N (HMM E-Value=5.3) 27 9.4
SB_7813| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_14608| Best HMM Match : AhpC-TSA (HMM E-Value=0)
Length = 265
Score = 221 bits (541), Expect = 2e-58
Identities = 104/160 (65%), Positives = 127/160 (79%), Gaps = 4/160 (2%)
Frame = +2
Query: 53 KVFSFNKMPLQMT---KPAPQFKATAV-VNGEFKDISLSDYKGKYVVLFFYPLDFTFVCP 220
++ SF++ + T KPAP F TAV +GEF D+ LSDYKGKYVVLFFYPLDFTFVCP
Sbjct: 39 RMMSFSRADMSKTAIQKPAPAFSGTAVNKHGEFIDLKLSDYKGKYVVLFFYPLDFTFVCP 98
Query: 221 TEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRIS 400
TEIIAFS++ DEF+ I CEV+ S DS ++HLAW N PRK+GG+G +NIP++SD + +IS
Sbjct: 99 TEIIAFSDRVDEFKAINCEVIACSVDSEYSHLAWTNVPRKKGGIGNINIPILSDLTKQIS 158
Query: 401 RDYGVLDEETGIPFRGLFIIDDKQNLRQITINDLPVGRSV 520
+DYGVL E+ G+ RGLFIIDDK LRQITINDLPVGRSV
Sbjct: 159 KDYGVLLEDQGVALRGLFIIDDKGILRQITINDLPVGRSV 198
>SB_22073| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 129 bits (312), Expect = 1e-30
Identities = 56/80 (70%), Positives = 69/80 (86%)
Frame = +2
Query: 83 QMTKPAPQFKATAVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFR 262
Q++KPAP ++ TAVVNGEFK++ LSD++GKY+V FFYPLDFTFVCPTEIIAFS++ +EFR
Sbjct: 55 QISKPAPFWEGTAVVNGEFKELKLSDFEGKYLVFFFYPLDFTFVCPTEIIAFSDRIEEFR 114
Query: 263 KIGCEVLGASTDSHFTHLAW 322
I EV+G S DS FTHLAW
Sbjct: 115 AINTEVVGCSVDSVFTHLAW 134
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +2
Query: 446 GLFIIDDKQNLRQITINDLPVGRSV 520
GLFIIDDK LRQIT+NDLPVGRSV
Sbjct: 135 GLFIIDDKGVLRQITMNDLPVGRSV 159
>SB_29430| Best HMM Match : AhpC-TSA (HMM E-Value=0.00012)
Length = 704
Score = 98.3 bits (234), Expect = 3e-21
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = +2
Query: 326 NTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITINDLP 505
N PRK+GG+G +NIP++SD + +IS+DYGVL E+ G+ RGLFIIDDK LRQITINDLP
Sbjct: 3 NVPRKKGGIGNINIPILSDLTKQISKDYGVLLEDQGVALRGLFIIDDKGILRQITINDLP 62
Query: 506 VGRSV 520
VGRSV
Sbjct: 63 VGRSV 67
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +1
Query: 334 AQAGRTRPHEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADHDQRPARG 510
+ AG + +R+ A H PR+ G G+ HS+P + +P + P +G
Sbjct: 18 SSAGEESLADSGEGRRENARHKPRVMIGGEGEKHSVPAVITIPSVTDPGVAEGRPPRKG 76
>SB_49729| Best HMM Match : Vps54 (HMM E-Value=3.7)
Length = 353
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +1
Query: 358 HEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADHDQRPARGEVG 519
H+ + K + P LP ++ R + L LH EP A + P R E G
Sbjct: 151 HKWRNLKEVLVPSLPERQTGQRNRTNKLLMNLHRVTSPEPPATRPKHPGRVEAG 204
>SB_7173| Best HMM Match : dDENN (HMM E-Value=1.5e-08)
Length = 416
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/56 (39%), Positives = 28/56 (50%)
Frame = +2
Query: 5 SKASHSPVLSVFVYYSKVFSFNKMPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK 172
S +S SPVLSV + V S + +Q T P F AT + G F D L+ GK
Sbjct: 204 SSSSRSPVLSVTDGIA-VQSSSTESVQPTLILPPFTATGLHTGSFYDDCLAVLSGK 258
>SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3293
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/61 (29%), Positives = 24/61 (39%)
Frame = +1
Query: 325 QHAAQAGRTRPHEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADHDQRPA 504
QH+ T P + SS +Q PH P R R T H+ + PQ+ A
Sbjct: 784 QHSESVSETSP-QLSSTAQQTPPHSPATRHNARTSSPQSLATRHNAWTSSPQSPATLHNA 842
Query: 505 R 507
R
Sbjct: 843 R 843
>SB_41164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 364 HSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADHDQRPARGE 513
HSS K+ + RLRSA G+ ++P+T Q P H + P+ G+
Sbjct: 38 HSSKKKGLVK-TKRLRSASVGEAQNMPKTT--AGQLRPSRRHLKAPSTGK 84
>SB_37636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/57 (29%), Positives = 21/57 (36%)
Frame = +1
Query: 337 QAGRTRPHEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADHDQRPAR 507
Q GR RP++H V H PR R R S P + R H + R
Sbjct: 147 QTGRMRPYDHQRRGCIVRNHRPRDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPR 203
>SB_7856| Best HMM Match : F5_F8_type_C (HMM E-Value=3.6e-11)
Length = 334
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 380 DKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQI--TIND 499
D ++ Y V+D+ET I GL I +K+N +++ T ND
Sbjct: 275 DTIREVNCRYNVVDKETRIKVTGLLTIKEKKNGKELYRTRND 316
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 340 AGRTRPHEHSSDKRQVAPHLPRLRSAGRGDGHSLPR 447
+G+ P SSD R L LRS G +SLPR
Sbjct: 399 SGKEGPMSDSSDLRAALKELAYLRSIQTGGEYSLPR 434
>SB_17596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = +1
Query: 337 QAGRTRPHEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADH-DQRPARG 510
+ GR RP++H V H PR R R S P + R H Q P G
Sbjct: 43 KTGRMRPYDHQRRGCIVRNHRPRDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSG 101
>SB_13940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = +1
Query: 337 QAGRTRPHEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADH-DQRPARG 510
+ GR RP++H V H PR R R S P + R H Q P G
Sbjct: 43 KTGRMRPYDHQRRGCIVRNHRPRDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSG 101
>SB_57709| Best HMM Match : RVT_1 (HMM E-Value=0.00081)
Length = 754
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 53 KVFSFNKMPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK 172
K FSF P + +P P+ K V + + ISL+ K
Sbjct: 321 KTFSFELAPSAIARPLPKSKHAKTVENDVRLISLTSQVAK 360
>SB_13227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = +1
Query: 343 GRTRPHEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADH-DQRPARG 510
GR RP++H V H PR R R S P + R H Q P G
Sbjct: 2 GRMRPYDHQRRGCIVRNHRPRDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSG 58
>SB_8778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 95
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/57 (28%), Positives = 21/57 (36%)
Frame = +1
Query: 337 QAGRTRPHEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADHDQRPAR 507
+ GR RP++H V H PR R R S P + R H + R
Sbjct: 37 ETGRMRPYDHQRRGCIVRNHRPRDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPR 93
>SB_36665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +1
Query: 169 EICCAVLLSFGLHVRVPDGDHRVLGEGGRVPQD 267
+ CC V +FG DHR+LG D
Sbjct: 475 DFCCTVKAAFGYKKNATTKDHRMLGTNNVASND 507
>SB_31170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = +1
Query: 343 GRTRPHEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADH-DQRPARG 510
GR RP++H V H PR R R S P + R H Q P G
Sbjct: 2 GRMRPYDHQRRGCIVRNHRPRDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPRSG 58
>SB_27396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 95
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/57 (28%), Positives = 21/57 (36%)
Frame = +1
Query: 337 QAGRTRPHEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADHDQRPAR 507
+ GR RP++H V H PR R R S P + R H + R
Sbjct: 37 ETGRMRPYDHQRRGCIVRNHRPRDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPR 93
>SB_14500| Best HMM Match : Vicilin_N (HMM E-Value=5.3)
Length = 237
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/57 (28%), Positives = 21/57 (36%)
Frame = +1
Query: 337 QAGRTRPHEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADHDQRPAR 507
+ GR RP++H V H PR R R S P + R H + R
Sbjct: 99 ETGRMRPYDHQRRGCIVRNHRPRDRQQSRRTARSPPHSTTDREDGTLAERHAPQAPR 155
>SB_7813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 58
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +1
Query: 343 GRTRPHEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADHDQRPAR 507
GR RP++H V H PR R R S P + R+ H + R
Sbjct: 2 GRMRPYDHQRRGCIVRNHRPRDRQQSRRTARSPPHSTTDRKDGTLAERHAPQAPR 56
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,252,407
Number of Sequences: 59808
Number of extensions: 277786
Number of successful extensions: 1171
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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