Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304F05f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)... 177 5e-45
At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putat... 175 2e-44
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 72 3e-13
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 63 1e-10
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 34 0.050
At1g80910.1 68414.m09493 expressed protein 34 0.067
At1g16020.2 68414.m01922 expressed protein 32 0.27
At1g16020.1 68414.m01921 expressed protein 32 0.27
At5g57370.1 68418.m07168 expressed protein low similarity to nuc... 31 0.62
At3g62170.1 68416.m06985 pectinesterase family protein contains ... 28 3.3
At4g16146.1 68417.m02449 expressed protein 28 4.4
At5g65760.1 68418.m08275 serine carboxypeptidase S28 family prot... 27 5.8
At4g28395.1 68417.m04064 lipid transfer protein, putative identi... 27 5.8
At3g58950.1 68416.m06569 F-box family protein contains F-box dom... 27 7.7
At2g01190.1 68415.m00030 octicosapeptide/Phox/Bem1p (PB1) domain... 27 7.7
At1g34110.1 68414.m04230 leucine-rich repeat transmembrane prote... 27 7.7
>At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)
identical to SP|Q96291 2-cys peroxiredoxin BAS1,
chloroplast precursor {Arabidopsis thaliana}; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 266
Score = 177 bits (430), Expect = 5e-45
Identities = 88/150 (58%), Positives = 108/150 (72%), Gaps = 1/150 (0%)
Frame = +2
Query: 74 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 250
+PL K AP F+A AV + EF + LSDY GK YV+LFFYPLDFTFVCPTEI AFS++
Sbjct: 72 LPLVGNK-APDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRH 130
Query: 251 DEFRKIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEET 430
EF K+ EVLG S DS F+HLAW+ T RK GGLG +N PLISD + IS+ +GVL +
Sbjct: 131 SEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQ 190
Query: 431 GIPFRGLFIIDDKQNLRQITINDLPVGRSV 520
GI RGLFIID + ++ TIN+L +GRSV
Sbjct: 191 GIALRGLFIIDKEGVIQHSTINNLGIGRSV 220
>At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putative
very strong similarity to SP|Q96291 2-cys peroxiredoxin
BAS1, chloroplast precursor {Arabidopsis thaliana};
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 273
Score = 175 bits (425), Expect = 2e-44
Identities = 86/150 (57%), Positives = 109/150 (72%), Gaps = 1/150 (0%)
Frame = +2
Query: 74 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 250
+PL K AP F+A AV + EF + LS+Y GK YV+LFFYPLDFTFVCPTEI AFS++
Sbjct: 79 LPLVGNK-APDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRY 137
Query: 251 DEFRKIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEET 430
+EF K+ EVLG S DS F+HLAW+ T RK GGLG +N PL+SD + IS+ +GVL +
Sbjct: 138 EEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQ 197
Query: 431 GIPFRGLFIIDDKQNLRQITINDLPVGRSV 520
GI RGLFIID + ++ TIN+L +GRSV
Sbjct: 198 GIALRGLFIIDKEGVIQHSTINNLGIGRSV 227
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 71.7 bits (168), Expect = 3e-13
Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Frame = +2
Query: 140 KDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLA 319
K +SL YKGK VVL+FYP D T C + AF + ++F+K G EV+G S D +H A
Sbjct: 86 KPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSASHKA 145
Query: 320 WINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETG-IPFRGLFIIDDKQNLRQITIN 496
+ + + + L+SD+ +++ +D+GV + G +P R +++ DK + Q+ N
Sbjct: 146 FASKYK-------LPYTLLSDEGNKVRKDWGVPGDLFGALPGRQTYVL-DKNGVVQLIYN 197
Query: 497 D 499
+
Sbjct: 198 N 198
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 62.9 bits (146), Expect = 1e-10
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = +2
Query: 152 LSDY-KGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWIN 328
L DY + VLF +P DFT VC TE+ A ++ A EF K G ++LG S D +H WI
Sbjct: 24 LHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHKDWIK 83
Query: 329 TPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITINDLPV 508
+N P+I+D + I ++D P R L I+ ++ +
Sbjct: 84 DIEAFNHGSKVNYPIIADPNKEIIPQLNMIDPIENGPSRALHIVGPDSKIKLSFLYPSTT 143
Query: 509 GRSV 520
GR++
Sbjct: 144 GRNM 147
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 34.3 bits (75), Expect = 0.050
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +2
Query: 125 VNGEFKDISLSD-YKGKYVVLFFYPLDFTFVCPTE-IIAFSEKADEFRKIGCE-VLGAST 295
V+ +F LSD +KGK VV+F P +T VC + + ++ D+F+ G + V+ S
Sbjct: 58 VSSKFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSV 117
Query: 296 DSHFTHLAW 322
+ F W
Sbjct: 118 NDPFAINGW 126
>At1g80910.1 68414.m09493 expressed protein
Length = 497
Score = 33.9 bits (74), Expect = 0.067
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Frame = +2
Query: 143 DISLSDYKGKYV--VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDS 301
D+ ++G+ + +LFFYP D TF +I SE F ++ CEV+ A S
Sbjct: 19 DLRRGQHEGQELDKILFFYPPDLTFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHS 78
Query: 302 H 304
H
Sbjct: 79 H 79
>At1g16020.2 68414.m01922 expressed protein
Length = 502
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +2
Query: 179 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 304
+LFFYP D F +I SE F ++ CEV+ A SH
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77
>At1g16020.1 68414.m01921 expressed protein
Length = 515
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +2
Query: 179 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 304
+LFFYP D F +I SE F ++ CEV+ A SH
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77
>At5g57370.1 68418.m07168 expressed protein low similarity to
nucleic acid binding protein [Homo sapiens] GI:431953
Length = 219
Score = 30.7 bits (66), Expect = 0.62
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 346 RTRPHEHSSDKRQV-APHLPRLRSAGRGDGHSLPRTLHHRRQA-EPQADHDQRPARGEV 516
R+R +H + R V +P R RS R HHRR++ P A +RP +G V
Sbjct: 54 RSRTPDHHARARHVRSPERYRSRSRSIDRDRDRDRQRHHRRRSPSPDAPSRKRPRQGSV 112
>At3g62170.1 68416.m06985 pectinesterase family protein contains
Pfam profiles: PF01095 pectinesterase, PF04043 plant
invertase/pectin methylesterase inhibitor ;similar to
pollen-specific pectin esterase GI:1620652 from
[Brassica rapa subsp. pekinensis]
Length = 588
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 178 NIFPLVVRQRNVLELSVDDGRGLELGSGFGHLQRHLVETKD 56
+IF VV + + VDD + + +G+G G R L+E D
Sbjct: 192 DIFHSVVTAMAQMGVKVDDMKNITMGAGAGGAARRLLEDND 232
>At4g16146.1 68417.m02449 expressed protein
Length = 102
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 338 KQGGLGPMNIPLISDKSHRI---SRDYGVLDEETGIPFRGLFIID 463
K GGL P PLIS S R S D+ +L +E I R + I+
Sbjct: 25 KYGGLVPKKKPLISKDSKRAFFDSADWALLKQEASIDQRTIAAIE 69
>At5g65760.1 68418.m08275 serine carboxypeptidase S28 family protein
similar to SP|P42785 Lysosomal Pro-X carboxypeptidase
precursor (EC 3.4.16.2) (Prolylcarboxypeptidase) (PRCP)
(Proline carboxypeptidase) {Homo sapiens}; contains Pfam
profile PF05577: Serine carboxypeptidase S28
Length = 515
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 11 ASHSPVLSVFVYYSKVFSFNKMPLQMTKPAPQFKATAVVNGE 136
ASH +L +F +++ VF N L +K P+F N E
Sbjct: 2 ASHFCLLLIFTFFTLVFPSNGSSLSSSKLLPRFPRYTFQNRE 43
>At4g28395.1 68417.m04064 lipid transfer protein, putative identical
to anther-specific gene ATA7 [gi:2746339]; contains Pfam
protease inhibitor/seed storage/LTP family domain
Length = 180
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 396 MRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCES 295
M C + + G+F PSP C RGV VK S
Sbjct: 77 MPC-MGFVEGIFQQPSPDCCRGVTHLNNVVKFTS 109
>At3g58950.1 68416.m06569 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = -3
Query: 360 MGPSPPCLRGVLIQARCVKCESVEAPSTSQPILRNSS 250
+GP P L+ ++I + ++C+++E + P+L S
Sbjct: 99 LGPVLPMLKTLIIDSAWIRCDTIETFLPTFPVLEELS 135
>At2g01190.1 68415.m00030 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein Pfam profile PF00564: PB1
domain
Length = 720
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +1
Query: 328 HAAQAGRTRPHEHSSDKRQVAPHLPRLRSAGRGDGHSLP 444
H QAG +P S + + P + G GH LP
Sbjct: 389 HGVQAGYRKPPTPRSQPQNLPPQQAHQLKSNSGGGHELP 427
>At1g34110.1 68414.m04230 leucine-rich repeat transmembrane protein
kinase, putative contains similarity to receptor protein
kinase-like protein GI:10177178 from [Arabidopsis
thaliana]
Length = 1045
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = -3
Query: 360 MGPSP---PCLRGVLIQARCVKCESVEAPSTSQPILRNSSA 247
+ PSP P ++ V+ VKC E TSQP+++ SS+
Sbjct: 1005 VNPSPVERPTMKEVVTLLMEVKCSPEEWGKTSQPLIKPSSS 1045
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,923,364
Number of Sequences: 28952
Number of extensions: 192181
Number of successful extensions: 721
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -