Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304F03f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 48 6e-08
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 48 6e-08
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 48 6e-08
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 40 2e-05
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 31 0.009
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 5.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 7.7
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 48.0 bits (109), Expect = 6e-08
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 55 VVLPCRVKGHPKPKITWFNGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAF 234
V LPC G P P++TW + ++ + R++ L G L I + +D EY+C EN F
Sbjct: 1294 VKLPCLAVGVPAPEVTW-KVRGAVLQSSDRLRQLPEGSLFIKEVDRTDAGEYSCYVENTF 1352
Query: 235 GSE 243
G +
Sbjct: 1353 GHD 1355
Score = 32.7 bits (71), Expect = 0.002
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = +1
Query: 46 GNRVVLPCRVKGHPKPKITWFNGQNVPIEKNPRMK-VLRSGELVISSLLWSDMDE----- 207
G V+ C+ +G+P+P I W + P ++ VL +G LV D +
Sbjct: 18 GTGAVVECQARGNPQPDIIWVRADGSAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQ 77
Query: 208 -YTCQAENAFGS 240
Y+C A + GS
Sbjct: 78 VYSCLARSPAGS 89
Score = 32.7 bits (71), Expect = 0.002
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = +1
Query: 46 GNRVVLPCRVKGHPKPKITWFN------GQNVPIE-KNPRMKVLRSGELVISSLLWSDMD 204
G+ + C+ G PKP++TW G ++ NP + V G L I+++ ++
Sbjct: 693 GSDARVECKADGFPKPQVTWKKAAGDTPGDYTDLKLSNPDISV-EDGTLSINNIQKTNEG 751
Query: 205 EYTCQAENAFGS 240
Y C+A N G+
Sbjct: 752 YYLCEAVNGIGA 763
Score = 30.3 bits (65), Expect = 0.013
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Frame = +1
Query: 4 PRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITW-FNGQNVPIEKNPRM----KVLRSG- 165
P + G VL C +G I W N + + + + R ++L +G
Sbjct: 777 PHFEIKLKNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDPKSDSRYTIREEILANGV 836
Query: 166 --ELVISSLLWSDMDEYTCQAENAFGSE 243
+L I SD +TC A NAFGS+
Sbjct: 837 LSDLSIKRTERSDSALFTCVATNAFGSD 864
Score = 28.3 bits (60), Expect = 0.051
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Frame = +1
Query: 4 PRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITW-FNGQNVPIEKNPRM--KVLRSGELV 174
P+I +++ G + L C G+P P+ITW +G+ + + ++ V +G++V
Sbjct: 394 PQIRQAFAEETLQPGPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVV 453
Query: 175 ----ISSLLWSDMDEYTCQAENAFGS 240
ISS +D Y C A + GS
Sbjct: 454 SHLNISSTHTNDGGLYKCIAASKVGS 479
Score = 25.0 bits (52), Expect = 0.47
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 157 RSGELVISSLLWSDMDEYTCQAENAFGSEKAKT 255
R L+IS + EY C AENA G+ T
Sbjct: 639 RVSMLMISVITARHAGEYVCTAENAAGTASHST 671
Score = 24.6 bits (51), Expect = 0.62
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +1
Query: 25 STYVDNIGNRVVLPCRVKGHPKPKITWF-NGQNVPIEKNPRMKVLRSGELVISSLLWSDM 201
ST + G C V+G+P ++W +G+ + +E+ VLR I S+ D
Sbjct: 315 STQTIDFGRPATFTCNVRGNPIKTVSWLKDGKPLGLEE----AVLR-----IESVKKEDK 365
Query: 202 DEYTCQAENAFGSEKA 249
Y C N S +A
Sbjct: 366 GMYQCFVRNDQESAQA 381
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 48.0 bits (109), Expect = 6e-08
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +1
Query: 61 LPCRVKGHPKPKITWFNGQNVPI--EKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAF 234
L C G P + W+ GQ I + +++L SGEL++S+L D +YTCQ ENA
Sbjct: 1333 LACNAVGDPTRE--WYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQDGGDYTCQVENAQ 1390
Query: 235 GSEK 246
G++K
Sbjct: 1391 GNDK 1394
Score = 38.7 bits (86), Expect = 4e-05
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 46 GNRVVLPCRVKGHPKPKITWFNGQNVPIEKNPRMKVLRSGELVISSL-LWSDMDEYTCQA 222
G + L C V G+P +I W N + + R KVL G LVI+S+ D YTC A
Sbjct: 533 GETLRLKCPVAGYPIEEIKW-ERANRELPDDLRQKVLPDGTLVITSVQKKGDAGVYTCSA 591
Query: 223 ENAFG 237
N G
Sbjct: 592 RNKQG 596
Score = 36.7 bits (81), Expect = 1e-04
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Frame = +1
Query: 4 PRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITWF------NGQNVPIEKNPRMKVLRSG 165
PR +V + V L C+ +G P P I W +G+ + + K+L +G
Sbjct: 710 PRWIVEPTDVSVERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNG 769
Query: 166 ELVISSLLWSDMDEYTCQAENAFGS 240
L++ + Y CQA N GS
Sbjct: 770 TLLLQHVKEDREGFYLCQASNGIGS 794
Score = 36.3 bits (80), Expect = 2e-04
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Frame = +1
Query: 46 GNRVVLPCRVKGHPKPKITWFNGQNVPIEK--NPRMKVLRS-------GELVISSLLWSD 198
G+ L C V G +TW G + + N R+ V R +L ISS SD
Sbjct: 822 GDTATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASD 881
Query: 199 MDEYTCQAENAFGSEK 246
Y CQA N +G ++
Sbjct: 882 SGAYFCQASNLYGRDQ 897
Score = 35.9 bits (79), Expect = 3e-04
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Frame = +1
Query: 4 PRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITW-FNGQNVPIEKNPRM--KVLRSGELV 174
P ++ S+ G V L C G+P P++TW +G +P + V G+++
Sbjct: 422 PMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVHGDVI 481
Query: 175 ----ISSLLWSDMDEYTCQAENAFG 237
IS ++ D EY+C AEN G
Sbjct: 482 SHVNISHVMVEDGGEYSCMAENRAG 506
Score = 29.1 bits (62), Expect = 0.029
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Frame = +1
Query: 61 LPCRVKGHPKPKITWFNGQNVPIEKNPRM-KVLRSGELVI----SSLLWSDMDE--YTCQ 219
L C G P I W P+ P + +VLR+G LV+ ++ D+ Y C
Sbjct: 50 LDCTATGSPPLNIDWSTADGHPVNDVPGVRRVLRNGTLVLLPFPAAAFRQDVHSAAYRCV 109
Query: 220 AENAFG 237
A N+ G
Sbjct: 110 ASNSVG 115
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 48.0 bits (109), Expect = 6e-08
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +1
Query: 61 LPCRVKGHPKPKITWFNGQNVPI--EKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAF 234
L C G P + W+ GQ I + +++L SGEL++S+L D +YTCQ ENA
Sbjct: 1329 LACNAVGDPTRE--WYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQDGGDYTCQVENAQ 1386
Query: 235 GSEK 246
G++K
Sbjct: 1387 GNDK 1390
Score = 38.7 bits (86), Expect = 4e-05
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 46 GNRVVLPCRVKGHPKPKITWFNGQNVPIEKNPRMKVLRSGELVISSL-LWSDMDEYTCQA 222
G + L C V G+P +I W N + + R KVL G LVI+S+ D YTC A
Sbjct: 533 GETLRLKCPVAGYPIEEIKW-ERANRELPDDLRQKVLPDGTLVITSVQKKGDAGVYTCSA 591
Query: 223 ENAFG 237
N G
Sbjct: 592 RNKQG 596
Score = 36.7 bits (81), Expect = 1e-04
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Frame = +1
Query: 4 PRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITWF------NGQNVPIEKNPRMKVLRSG 165
PR +V + V L C+ +G P P I W +G+ + + K+L +G
Sbjct: 706 PRWIVEPTDVSVERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNG 765
Query: 166 ELVISSLLWSDMDEYTCQAENAFGS 240
L++ + Y CQA N GS
Sbjct: 766 TLLLQHVKEDREGFYLCQASNGIGS 790
Score = 36.3 bits (80), Expect = 2e-04
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Frame = +1
Query: 46 GNRVVLPCRVKGHPKPKITWFNGQNVPIEK--NPRMKVLRS-------GELVISSLLWSD 198
G+ L C V G +TW G + + N R+ V R +L ISS SD
Sbjct: 818 GDTATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASD 877
Query: 199 MDEYTCQAENAFGSEK 246
Y CQA N +G ++
Sbjct: 878 SGAYFCQASNLYGRDQ 893
Score = 35.9 bits (79), Expect = 3e-04
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Frame = +1
Query: 4 PRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITW-FNGQNVPIEKNPRM--KVLRSGELV 174
P ++ S+ G V L C G+P P++TW +G +P + V G+++
Sbjct: 422 PMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVHGDVI 481
Query: 175 ----ISSLLWSDMDEYTCQAENAFG 237
IS ++ D EY+C AEN G
Sbjct: 482 SHVNISHVMVEDGGEYSCMAENRAG 506
Score = 29.1 bits (62), Expect = 0.029
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Frame = +1
Query: 61 LPCRVKGHPKPKITWFNGQNVPIEKNPRM-KVLRSGELVI----SSLLWSDMDE--YTCQ 219
L C G P I W P+ P + +VLR+G LV+ ++ D+ Y C
Sbjct: 50 LDCTATGSPPLNIDWSTADGHPVNDVPGVRRVLRNGTLVLLPFPAAAFRQDVHSAAYRCV 109
Query: 220 AENAFG 237
A N+ G
Sbjct: 110 ASNSVG 115
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 39.9 bits (89), Expect = 2e-05
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 43 IGNRVVLPCRVKGHPKPKITWF-NGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQ 219
+G+ V + C V G P P + W NG ++ P ++V G L ++ + YTC
Sbjct: 324 VGDNVEIKCDVTGTPPPPLVWRRNGADLETLNEPEIRVFNDGSLYLTKVQLIHAGNYTCH 383
Query: 220 A 222
A
Sbjct: 384 A 384
Score = 35.1 bits (77), Expect = 4e-04
Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 4 PRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITWF-NGQNVPIEKNPRMKVLRSG-ELVI 177
P + V+ + + C V G P P++ W N + + ++ + ++ +G +L+I
Sbjct: 402 PEVKVTPRFQAKRLKEEANIRCHVAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLII 461
Query: 178 SSLLWSDMDEYTCQAENAFG 237
++ ++D Y CQA + G
Sbjct: 462 KNVDYADTGAYMCQASSIGG 481
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 30.7 bits (66), Expect = 0.009
Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Frame = +1
Query: 43 IGNRVVLPCRVKGHPKPKITW-------FNGQNVPIEKNPRMKVLRSGELVISSLLWSDM 201
+G ++ C G P+P+ITW ++ + + + P ++ I D
Sbjct: 36 LGRKITFFCMATGFPRPEITWLKDGIELYHHKFFQVHEWPVGNDTLKSKMEIDPATQKDA 95
Query: 202 DEYTCQAENAFGSEK 246
Y CQA+N + ++
Sbjct: 96 GYYECQADNQYAVDR 110
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/42 (21%), Positives = 15/42 (35%)
Frame = +3
Query: 36 GQHRQQGGAPVPRQGTPQAQDHLVQRTECAH*KEPAHEGASL 161
G H G +P + P + T H ++P H +
Sbjct: 282 GHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTDI 323
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.0 bits (42), Expect = 7.7
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 27 HLRGQHRQQGGAPVPRQGTP 86
H Q Q+G P P QG P
Sbjct: 28 HQSPQAPQRGSPPNPSQGPP 47
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,024
Number of Sequences: 438
Number of extensions: 3348
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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