Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304F03f
         (521 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g38560.1 68418.m04662 protein kinase family protein contains ...    33   0.12 
At2g20320.1 68415.m02373 DENN (AEX-3) domain-containing protein ...    30   0.82 
At3g51630.1 68416.m05662 protein kinase family protein contains ...    28   4.4  
At2g37780.1 68415.m04639 DC1 domain-containing protein contains ...    27   5.8  
At5g37970.1 68418.m04573 S-adenosyl-L-methionine:carboxyl methyl...    27   7.7  
At4g03080.1 68417.m00416 kelch repeat-containing serine/threonin...    27   7.7  
At3g45350.1 68416.m04896 hypothetical protein similar to At4g094...    27   7.7  
At1g26120.1 68414.m03188 esterase-related contains similaity to ...    27   7.7  

>At5g38560.1 68418.m04662 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 681

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 35/96 (36%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
 Frame = +2

Query: 8   ASWSPIAPTWTTSATGWCSRAASRDTPSPR----SPGSTDRMCPLKRTRA*RCFARASWS 175
           AS SP APT TT+     S +   +TPSP     SP       P   T        A+ +
Sbjct: 121 ASPSPPAPT-TTNPPPKPSPSPPGETPSPPGETPSPPKPSPSTPTPTTTTSPPPPPATSA 179

Query: 176 YPPSSGATWTSTLAKPKT-LSARRRLKHSSTPLNPS 280
            PPSS  T  STLA P T L    R K  + P  P+
Sbjct: 180 SPPSSNPTDPSTLAPPPTPLPVVPREKPIAKPTGPA 215


>At2g20320.1 68415.m02373 DENN (AEX-3) domain-containing protein
           contains Pfam domain PF02141: DENN (AEX-3) domain
          Length = 976

 Score = 30.3 bits (65), Expect = 0.82
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = +1

Query: 79  GHPKPKITWFNGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAFGSE 243
           GH  P++T  + +  PIE+N   + + S      S+L  D+DE +  +EN FG +
Sbjct: 672 GHTSPEVTCSDPRTQPIERNESCESVFSS---ARSVLSDDVDELS-NSENDFGDD 722


>At3g51630.1 68416.m05662 protein kinase family protein contains
           Pfam profile: PF00069 protein kinase domain
          Length = 549

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 138 VLFNGHILSVEPGDLGLGVSLDAAREHHPV 49
           +  NGH+  V+ GDLGL   L  ++  H V
Sbjct: 159 IFVNGHLGQVKIGDLGLAAILRGSQNAHSV 188


>At2g37780.1 68415.m04639 DC1 domain-containing protein contains
           Pfam PF03107: DC1 domain
          Length = 286

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 39  QHRQQGGAPVPRQGTPQAQDHLVQRTECAH*KEPAHEGA 155
           QH+QQ   P    G+P+++   V  T     K+P   GA
Sbjct: 220 QHQQQNHHPYMNSGSPKSESSAVSTTTKTKKKKPGFFGA 258


>At5g37970.1 68418.m04573 S-adenosyl-L-methionine:carboxyl
           methyltransferase family protein similar to
           defense-related protein cjs1 [Brassica
           carinata][GI:14009292], theobromine synthase [Coffea
           arabica][GI:13365751], SAM:jasmonic acid carboxyl
           methyltransferase [GI:13676829]
          Length = 412

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -2

Query: 508 KKNST-LGASATNQIILNSKRC*TNNTVYRSVFFFKRTQRFSYAV 377
           K+N T +GA    Q+  N +     NT++R+  FF R + FS  V
Sbjct: 139 KENKTYIGAPLEFQVCFNDQPNNDFNTLFRTQPFFSRKEYFSVGV 183


>At4g03080.1 68417.m00416 kelch repeat-containing serine/threonine
           phosphoesterase family protein contains Pfam profiles:
           PF00149 calcineurin-like phosphoesterase, PF01344 kelch
           motif
          Length = 881

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 127 IEKNPRMKVLRSGELVISSLLWSDMDE 207
           IEK  R   + +G LV+  LLWSD  E
Sbjct: 716 IEKIERPITMDAGSLVLMDLLWSDPTE 742


>At3g45350.1 68416.m04896 hypothetical protein similar to At4g09400,
           At2g14330
          Length = 291

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 12/16 (75%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
 Frame = +1

Query: 55  VVLPC-RVKGHPKPKI 99
           VVL C RV GHPKPK+
Sbjct: 250 VVLVCWRVSGHPKPKL 265


>At1g26120.1 68414.m03188 esterase-related contains similaity to
           esterase 6 GI:606998 from [Drosophila simulans] and
           esterase GI:12584120 from [Sphingomonas elodea]
          Length = 476

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 183 GGYDQLARAKHLHARVLFNGHILSVEPGDLGL 88
           GGY+ L    H H+R L+    LS+  G+  L
Sbjct: 325 GGYNLLNLVDHFHSRGLYRSIFLSIMEGEESL 356


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,973,459
Number of Sequences: 28952
Number of extensions: 225066
Number of successful extensions: 629
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)