Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304F01f
         (310 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   0.97 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   1.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   3.0  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   3.9  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    20   5.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   5.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    20   5.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   6.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   6.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   6.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   6.8  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    20   6.8  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    20   6.8  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      20   6.8  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      20   6.8  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    19   9.0  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    19   9.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    19   9.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    19   9.0  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    19   9.0  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    19   9.0  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    19   9.0  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    19   9.0  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    19   9.0  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 0.97
 Identities = 16/59 (27%), Positives = 24/59 (40%)
 Frame = +1

Query: 13  VIFKA*LRLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSK 189
           ++F+  L  S  T+   Q++ S        G G+D  E    E    GD  S  A  S+
Sbjct: 654 LLFETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEEEAMITEDAQGGDAPSADAAESE 712


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
 Frame = -1

Query: 277 VSRDIRTTTEARRPGTARNTRRPKPTELSACC-RERSETPRH--RNKPSRP 134
           V   I TTT+A     A+      P E +    RER     H  RN+P RP
Sbjct: 282 VLEKICTTTDAAEFLAAQEIPGQNPGEKTNIAPRERPRATDHQRRNEPKRP 332


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 296 SGRVQSREQGHQDHHRGPAPRHSEKHSASEAD 201
           +G V S E  HQ  H G A +  +   A + D
Sbjct: 15  NGGVVSAEHPHQHQHYGAAVQVPQGGGAVQPD 46


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 11/47 (23%), Positives = 18/47 (38%)
 Frame = -1

Query: 259 TTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRR 119
           +TT       A +T     TE +      S++ +  N P    W +R
Sbjct: 160 STTSQNLSSPASSTSSTSSTEKAGTNNNNSKSSQSSNPPQIYPWMKR 206


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -3

Query: 260 DHHRGPAPRH-SEKHSASEADRAERLLPGA 174
           D HR   PRH  E+H    A  +  ++P A
Sbjct: 252 DDHRDRPPRHFHEEHDTRRAS-SRGIIPRA 280


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -1

Query: 259  TTTEARRPGTARNTRRPKPTELSACCRERSETP 161
            +TT +  PG+  N    +PTE        SE P
Sbjct: 1353 STTTSWNPGSTTNYPEWQPTEWHPPIPPTSEKP 1385


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 296 SGRVQSREQGHQDHHRGPA 240
           +G V S E  HQ  H G A
Sbjct: 15  NGGVVSAEHPHQHQHYGAA 33


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 202  TELSACCRERSE 167
            TEL+ CC ++ E
Sbjct: 1360 TELNLCCTKKKE 1371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 202  TELSACCRERSE 167
            TEL+ CC ++ E
Sbjct: 1360 TELNLCCTKKKE 1371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 202  TELSACCRERSE 167
            TEL+ CC ++ E
Sbjct: 1360 TELNLCCTKKKE 1371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 202  TELSACCRERSE 167
            TEL+ CC ++ E
Sbjct: 1360 TELNLCCTKKKE 1371


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 239 APGLCGGPDV 268
           APG+C G D+
Sbjct: 418 APGVCHGDDI 427


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 239 APGLCGGPDV 268
           APG+C G D+
Sbjct: 420 APGVCHGDDI 429


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 239 APGLCGGPDV 268
           APG+C G D+
Sbjct: 418 APGVCHGDDI 427


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 239 APGLCGGPDV 268
           APG+C G D+
Sbjct: 420 APGVCHGDDI 429


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 209 EADRAERLLPGALR 168
           +AD  +R+LP AL+
Sbjct: 54  DADELKRVLPDALK 67


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 242 PGLCGGPDVPA 274
           PG  GG D+PA
Sbjct: 179 PGEVGGYDIPA 189


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = +2

Query: 200 CRLRTPSVSRCAWAPGLCGGPDVPAHGSAPARR 298
           C++ TP+ +   W+   C   D    G   A R
Sbjct: 137 CQVCTPNATNTVWSHCQCVLADGVERGILTANR 169



 Score = 19.4 bits (38), Expect = 9.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 125 RPNRSRRFIPVTG 163
           RPN   RF+  TG
Sbjct: 508 RPNTYNRFLAATG 520


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = +2

Query: 200 CRLRTPSVSRCAWAPGLCGGPDVPAHGSAPARR 298
           C++ TP+ +   W+   C   D    G   A R
Sbjct: 137 CQVCTPNATNTVWSHCQCVLADGVERGILTANR 169


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 231 VPGRRASVVVLMSLLTALHPPGG 299
           +PG   +V V+  +    H PGG
Sbjct: 189 IPGMSENVDVINLMTYDFHIPGG 211


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 263 QDHHRGPAPRHSEKHSASEADRA 195
           Q HH G A   +   SA+ A  A
Sbjct: 74  QHHHNGAAVSAASSVSAASASMA 96


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 263 QDHHRGPAPRHSEKHSASEADRA 195
           Q HH G A   +   SA+ A  A
Sbjct: 133 QHHHNGAAVSAASSVSAASASMA 155


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 263 QDHHRGPAPRHSEKHSASEADRA 195
           Q HH G A   +   SA+ A  A
Sbjct: 74  QHHHNGAAVSAASSVSAASASMA 96


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 263 QDHHRGPAPRHSEKHSASEADRA 195
           Q HH G A   +   SA+ A  A
Sbjct: 133 QHHHNGAAVSAASSVSAASASMA 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,270
Number of Sequences: 336
Number of extensions: 1675
Number of successful extensions: 25
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5624413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)