Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304F01f
(310 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002
SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.19
SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.44
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 29 0.58
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.77
SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.77
SB_43189| Best HMM Match : PGAMP (HMM E-Value=2.1) 29 0.77
SB_19124| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_9087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 28 1.8
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 28 1.8
SB_31178| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.8
SB_58135| Best HMM Match : bZIP_1 (HMM E-Value=1.4e-09) 27 2.4
SB_31697| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_26402| Best HMM Match : K-box (HMM E-Value=1) 27 3.1
SB_59620| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 27 3.1
SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 27 3.1
SB_49940| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_41435| Best HMM Match : Cu2_monoox_C (HMM E-Value=4e-36) 27 4.1
SB_28880| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_26081| Best HMM Match : Ribosomal_S8 (HMM E-Value=3.8) 27 4.1
SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_32622| Best HMM Match : Ank (HMM E-Value=2.2e-05) 26 5.4
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35) 26 7.2
SB_39039| Best HMM Match : Drf_FH1 (HMM E-Value=6.4) 26 7.2
SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_6936| Best HMM Match : TP2 (HMM E-Value=1.1) 26 7.2
SB_57666| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_32907| Best HMM Match : Gly_radical (HMM E-Value=6) 26 7.2
SB_26701| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_26602| Best HMM Match : SNF (HMM E-Value=0) 26 7.2
SB_14911| Best HMM Match : Amelogenin (HMM E-Value=1.7) 26 7.2
SB_34906| Best HMM Match : Cadherin (HMM E-Value=0) 25 9.5
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 25 9.5
SB_28528| Best HMM Match : TUDOR (HMM E-Value=0.34) 25 9.5
SB_23288| Best HMM Match : MMR_HSR1 (HMM E-Value=8.3e-06) 25 9.5
SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_34800| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_26487| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_21662| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_3882| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 37.5 bits (83), Expect = 0.002
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = -1
Query: 283 RAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPHHF 104
R+ SR R +R P R +R P P S R RS +PR R+ SR RR
Sbjct: 225 RSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSRSRSPRRRHSRSRSPTHRRHRSRS 284
Query: 103 H 101
H
Sbjct: 285 H 285
>SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 31.1 bits (67), Expect = 0.19
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -1
Query: 274 SRDIRTTTEARRPGTARNTRRPKPTELSACCR----ERSETPRHRNKPSRPVWSRRSPHH 107
+RD R T R P ++ R P+P++ R +R P + + RP +R P H
Sbjct: 191 NRDTRDTINNRHPRPSQQQRHPRPSQQQRHPRPSQQQRYPRPSQQQRQPRPSQQQRYPRH 250
>SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 29.9 bits (64), Expect = 0.44
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +1
Query: 76 SSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSASDAECFSLCLGAGPL 252
++ +S+Y ++++ + ++++Y + P S +A SD FSLC+ GPL
Sbjct: 137 NTRLSEYLESRDCEAMDVR-LQRLYEHELVMYRLPESSATATPLSDLFDFSLCMCYGPL 194
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 29.5 bits (63), Expect = 0.58
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 262 RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRN-KPSR 137
R+ T R+ T+ N R P P S R S +PR R+ PSR
Sbjct: 543 RSYTSPRQRRTSPNNRSPPPRRRSPSPRRPSPSPRRRSTSPSR 585
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.1 bits (62), Expect = 0.77
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +2
Query: 116 TPSRPNR-SRRFIPVTGRL*ALPAASAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAP 289
TPS P+ S P T + P+ + TPS APG G P P+ SAP
Sbjct: 466 TPSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSAPGTPGTPSTPSTPSAP 524
>SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1221
Score = 29.1 bits (62), Expect = 0.77
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = -3
Query: 299 PSGRVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFST 135
P G+ +S ++H++ P+ + SE + + +P A+ P P F T
Sbjct: 689 PQGKTESANPSEEEHNKEDKPQEKD-DDKSEEETDDESIPEAMDTTPEPGKDFGT 742
>SB_43189| Best HMM Match : PGAMP (HMM E-Value=2.1)
Length = 461
Score = 29.1 bits (62), Expect = 0.77
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = -1
Query: 280 AVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPH 110
A+ + T RP + R R P S R +T PSRP + R PH
Sbjct: 4 ALHNTLTRTRVPSRPCSLRTVRHPHTGTKSTMAYARDDTLTRTRVPSRPSRTVRHPH 60
>SB_19124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -1
Query: 274 SRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSP 113
+RD R T R P ++ R P+P++ ++R P + + RP +R P
Sbjct: 151 NRDTRDTINNRHPRPSQQQRYPRPSQ-----QQRYPRPSQQQRHPRPSQQQRHP 199
>SB_9087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 221 VSRCAWAPGLCGGPDVPAHGS 283
++R W+ LCGGPD+ GS
Sbjct: 108 ITRSWWSSRLCGGPDINDDGS 128
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 290 RVQSREQGHQDHHRGPAPRHSEKHSASEADRAER 189
R +SR H+DH PR S HS D ER
Sbjct: 206 RSRSRSLRHEDHDDA-TPRRSRSHSLRHEDEEER 238
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = -3
Query: 308 AGHPSGRVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSP 153
+G P G D H GP RH H +RL P RD P
Sbjct: 131 SGPPDRHTPPDRNGPPDRH-GPPDRHGMDHGRGRGRGRDRLSPPPHRDRGRP 181
>SB_31178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 257 HHRGPAPRHSEKHSASEADRAER 189
H GP+ RHS H +E++ A+R
Sbjct: 123 HKEGPSSRHSNVHELNESELAKR 145
>SB_58135| Best HMM Match : bZIP_1 (HMM E-Value=1.4e-09)
Length = 275
Score = 27.5 bits (58), Expect = 2.4
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
Frame = -1
Query: 307 PVTPP--GGCRAVSRDIRTTTEARRPGTAR------NTRRPKPTELSACCRERSETPRHR 152
P TPP G V +++R + RR + +RPK ELS E+ R R
Sbjct: 123 PQTPPLKGPADGVKQELRNAIKCRRVAKGLEEMPHLDAKRPKVEELSPAELEKRRIRRER 182
Query: 151 NK 146
NK
Sbjct: 183 NK 184
>SB_31697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -1
Query: 250 EARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSP 113
E ++P A+ T + S+ ++ + +P + PS+P WSR +P
Sbjct: 432 EEKKPLEAKTTPNVG-SGASSAFQKNTPSPSPKTTPSKPSWSRPTP 476
>SB_26402| Best HMM Match : K-box (HMM E-Value=1)
Length = 166
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/73 (20%), Positives = 33/73 (45%)
Frame = +1
Query: 34 RLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSASD 213
+L + ++QQ++ S + VDS++ + EK + + SK+ L+++
Sbjct: 70 KLGETEYILQQMDSSVKQTAAIKEKDVDSLQQQLAEKDRRIEELNSKLESSKKDVLNSNQ 129
Query: 214 AECFSLCLGAGPL 252
+C GP+
Sbjct: 130 EKCLEKFKANGPV 142
>SB_59620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -1
Query: 241 RPGTARNTRRPKPTELSACCRERSETPRHRNKPSRP 134
RP T +T ++CC P H N SRP
Sbjct: 184 RPETVCHTTLTLVNRTNSCCHTTPNLPSHLNTQSRP 219
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = -1
Query: 283 RAVSRDIRTTTEARRPGTARNTRR--PKPTELSACCRERSETPRHRNKPSRPV 131
R R + T+ P R P+PT+ R+R T R KP++P+
Sbjct: 257 RPTERPTKKPTKPLLPEVEPEEERATPRPTKAKPTTRKRMPTERPTKKPTKPL 309
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = -1
Query: 304 VTPPGGCRAVSRDIRTTTEARRPGTARNTRR-PKPTELSACCRERSETPRHRNKPSRPVW 128
VTP R T++ P R+ P PT+ +R T R KP++P+
Sbjct: 132 VTPKPKTTVKRRPTERPTKSLLPEEEEKERQTPTPTKAKPTTIKRRPTERPTKKPTKPLL 191
Query: 127 SRRSP 113
P
Sbjct: 192 PEVEP 196
>SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = -3
Query: 254 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE 150
H P+P HS+ E LP PSPE
Sbjct: 741 HSQPSPEHSQPSPEHSLPSQEHSLPSPEHSQPSPE 775
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -3
Query: 299 PSGRVQS-REQGHQDHHRGPAPRH 231
PS R QS R+ H + RGP+PR+
Sbjct: 1371 PSERAQSPRDYRHSEEKRGPSPRN 1394
>SB_49940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 569
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 266 HQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCLVSTESTPFP 102
H HH RH KH+A A R + D+P+ + T +S +S FP
Sbjct: 167 HPSHHHVTKSRHQTKHNAKHATRVFSI------DSPNEDSQGKTANIS-DSASFP 214
>SB_41435| Best HMM Match : Cu2_monoox_C (HMM E-Value=4e-36)
Length = 821
Score = 26.6 bits (56), Expect = 4.1
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = -1
Query: 298 PPGGCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 122
PPG R R T E R PG N +RP + C T + R P R +
Sbjct: 313 PPGRVTNKKRPPGRVTNEKRPPGRVTNEKRPPGKVTNQKCPPSRVTNKKR-PPGRITNEK 371
Query: 121 RSP 113
R P
Sbjct: 372 RPP 374
Score = 26.6 bits (56), Expect = 4.1
Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = -1
Query: 298 PPGGCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 122
PPG R R T + R PG N +RP P ++ R + P R +
Sbjct: 363 PPGRITNEKRPPGRVTNQKRPPGRVTNKKRP-PGRITNQKRPPGRVTNQKRPPGRVTNKK 421
Query: 121 RSP 113
R P
Sbjct: 422 RPP 424
Score = 26.2 bits (55), Expect = 5.4
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -1
Query: 298 PPGGCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 122
PPG R R T + R PG N +RP P ++ R + + PSR +
Sbjct: 403 PPGRVTNQKRPPGRVTNKKRPPGRVTNQKRP-PGRVTNEKRPPGKVTNQKCPPSRVTNKK 461
Query: 121 RSP 113
R P
Sbjct: 462 RPP 464
Score = 26.2 bits (55), Expect = 5.4
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = -1
Query: 298 PPGGCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 122
PPG R R T + R PG N +RP + C T + R P R +
Sbjct: 413 PPGRVTNKKRPPGRVTNQKRPPGRVTNEKRPPGKVTNQKCPPSRVTNKKR-PPGRETNKK 471
Query: 121 RSP 113
R P
Sbjct: 472 RPP 474
>SB_28880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 221 VSRCAWAPGLCGGPDVPAH 277
V RC GL GGP+ PAH
Sbjct: 45 VERCCRFEGLPGGPEDPAH 63
>SB_26081| Best HMM Match : Ribosomal_S8 (HMM E-Value=3.8)
Length = 426
Score = 26.6 bits (56), Expect = 4.1
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = +1
Query: 148 YSGDGASLSAPGSKRSALSASDAECFSLCLGAGPLWWS*CPCSRLCTRPEG*P 306
YSGDG SK +L S C S CL +S C C+ R +G P
Sbjct: 15 YSGDGLEKENIYSKYKSLKYSVQGCMSSCLANSE--FSICNCTEGKFRVKGRP 65
>SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1488
Score = 26.2 bits (55), Expect = 5.4
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = -1
Query: 250 EARRPGTARNTRRPKPTELSACCRERSETP---RHR-NKPSRPVWSRRSPHHFHCS 95
EAR G+ R P + R SE P ++R PS P +S R+P CS
Sbjct: 913 EARWCGSERQPETPVAPAKQSQMRFNSEAPLAPQYRYESPSEPRYSPRTPPETRCS 968
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 270 GTSGPPQRPGAQAQRETLGVRSRQ 199
G GPP RPG Q+ T G R ++
Sbjct: 129 GPRGPPGRPGHPGQKGTRGRRGQR 152
>SB_32622| Best HMM Match : Ank (HMM E-Value=2.2e-05)
Length = 509
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -3
Query: 305 GHPSGRVQSREQGHQDHHRGPAP-RHSEKHSAS 210
GH S + SR Q DH AP R S HS +
Sbjct: 312 GHSSSTITSRSQHQHDHVTVTAPTRSSHGHSTN 344
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 149 IPVTGRL*ALPAASAQ--LCRLRTPSVSRCAWAP 244
IP +GR L +A+ LCR +P ++R AW P
Sbjct: 534 IPTSGRCSDLDTNTAKHVLCRGLSPILTRVAWRP 567
>SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35)
Length = 850
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 154 RNKPSRPVWSRRSPHHFHC 98
+NK V S +SPHH HC
Sbjct: 589 KNKKIVSVPSGKSPHHLHC 607
>SB_39039| Best HMM Match : Drf_FH1 (HMM E-Value=6.4)
Length = 254
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -3
Query: 185 LPGALR--DAPSPE*TFSTCLVSTESTPFP 102
LPGA R AP+P+ T +T L TE P P
Sbjct: 198 LPGASRAAPAPTPQPTAATPLPETEPEPEP 227
>SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1120
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +1
Query: 61 QQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAP 180
Q + S K G+G + E KQ EK GDG S P
Sbjct: 553 QPASKSKQSEKGKQGDGQPASEPKQSEKGKQGDGQPASEP 592
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 103 GNGVDSVETKQVEKVYSGDGASLSAP 180
G+G + E+KQ EK GDG S P
Sbjct: 448 GDGQPASESKQSEKGKQGDGQPASEP 473
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 76 SSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAP 180
S K G+G + E KQ EK GDG S P
Sbjct: 456 SKQSEKGKQGDGQPASEPKQSEKGKQGDGQPASEP 490
>SB_6936| Best HMM Match : TP2 (HMM E-Value=1.1)
Length = 256
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 217 RRPKPTELSACCRERSETPRHRNK 146
+R KP E R+RS +PR R++
Sbjct: 189 KRDKPRERKKVARDRSRSPRSRSR 212
>SB_57666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -3
Query: 302 HPSGRVQSREQGHQDHHRGPAPRHSEKHS 216
HP RV G ++RGP H +H+
Sbjct: 300 HPPLRVTYDVIGQPSYYRGPVANHENRHA 328
>SB_32907| Best HMM Match : Gly_radical (HMM E-Value=6)
Length = 390
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -1
Query: 292 GGCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPR 158
G A + + T ARRP RRP PT + R + TPR
Sbjct: 11 GQNNATTTGVVPTPRARRPVPTPRARRPNPTTKA---RRPAPTPR 52
>SB_26701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 409
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -3
Query: 293 GRVQSREQGHQDHHRGPAPRHSE 225
GR+++RE+ + HHR AP H+E
Sbjct: 325 GRLENREE--RGHHRAFAPDHAE 345
>SB_26602| Best HMM Match : SNF (HMM E-Value=0)
Length = 721
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = -1
Query: 301 TPPGGCRAVSRDIRTTTEARRPGTARNTR-RPKPTELSACCRERSETPRHRN 149
T PGG R + R +RT R G T E +C R RS R+
Sbjct: 86 TVPGGERKIGRRVRTKPHLARLGQRHQTACAGGQGETESCGRTRSVADAERS 137
>SB_14911| Best HMM Match : Amelogenin (HMM E-Value=1.7)
Length = 326
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 278 REQGHQDHHRGPAPRHSEKHSASEA 204
R+ G++D P PRHS H +++
Sbjct: 212 RDSGNRDRVTDPYPRHSSPHHRAQS 236
>SB_34906| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3922
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 103 GNGVDSVETKQVEKVYSGDGASLSAPGSKRSALS 204
G ++ VET K+ SGD + AP S + +S
Sbjct: 2771 GKCINVVETSSAYKIASGDYGKVPAPASSITLVS 2804
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -1
Query: 250 EARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRP 134
+A RP A RP+ + + R R + + ++K S+P
Sbjct: 601 QAARPRQAARQARPRQSSRKSKARARQASRKSKSKTSKP 639
>SB_28528| Best HMM Match : TUDOR (HMM E-Value=0.34)
Length = 736
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 94 YYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSAL-SASDAECFSLCL 237
YY G + T+ + YSGD +LS + L S ++ FS+ L
Sbjct: 660 YYPGFIASKLSTRYTVRTYSGDNVNLSIHDTPSVILDKVSISDTFSIIL 708
>SB_23288| Best HMM Match : MMR_HSR1 (HMM E-Value=8.3e-06)
Length = 210
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 260 DHHRGPAPRHSEKHSASEADRAERLLPG 177
D GP+ H ++HS +AD+ ++ G
Sbjct: 3 DDESGPSKAHRKRHSGPKADKKKKRSDG 30
>SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1792
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 299 PSGRVQSREQGHQDHHRGPAPRHSEKH 219
P + R +G + HHR HS+KH
Sbjct: 760 PMQHLGDRREGKRRHHRRHHHSHSQKH 786
>SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 251 RGPAPRHSEKHSASEADRAERLLPGALRDAP 159
R P +HS + AD+ + +P A++ AP
Sbjct: 493 RQPMLQHSSGEESENADKENQEVPSAIKPAP 523
>SB_34800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -3
Query: 302 HPSGRVQSREQGH-QDHHRGPAPRHSEKHSASEADRAERLL 183
H G +++E+ ++ H G P EK EA +AER L
Sbjct: 21 HHGGEPETKEKRLVREKHHGGEPETKEKRLVREALKAERSL 61
>SB_26487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 214 RPKPTELSACCRERSETPRHRNKPSRPVWSRRSPHH 107
+P+P S R + KP P+ SR++P H
Sbjct: 482 QPRPRSHSQTSRRSRASTSESRKPRDPLGSRQAPGH 517
>SB_21662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 251 RGPAPRHSEKHSASEADRAERLLPGALRDAP 159
R P +HS + AD+ + +P A++ AP
Sbjct: 95 RQPMLQHSSGEESENADKENQEVPSAIKPAP 125
>SB_3882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 217 RRPKPTELSACCRERSETP 161
RRP+ + CCR+R E P
Sbjct: 100 RRPRRSHRMFCCRQREEYP 118
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,805,973
Number of Sequences: 59808
Number of extensions: 219809
Number of successful extensions: 922
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 389827759
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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