Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304E12f
(437 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33724| Best HMM Match : Ribosomal_L44 (HMM E-Value=0) 124 3e-29
SB_37591| Best HMM Match : Ribosomal_L44 (HMM E-Value=0.026) 62 1e-10
SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 4e-05
SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 44 7e-05
SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37) 44 7e-05
SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4) 44 7e-05
SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40) 44 7e-05
SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 44 7e-05
SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_4159| Best HMM Match : Vpu (HMM E-Value=2) 44 7e-05
SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8) 40 9e-04
SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5) 39 0.002
SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6) 39 0.002
SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.006
SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.42
SB_57013| Best HMM Match : Pico_P2A (HMM E-Value=3.2) 25 2.7
SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_29219| Best HMM Match : 7tm_1 (HMM E-Value=9.8e-06) 28 3.9
SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_52318| Best HMM Match : Pox_A32 (HMM E-Value=0.066) 27 5.1
SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_22849| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 27 5.1
SB_11815| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.002) 27 5.1
SB_11515| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_14409| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_8267| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2) 27 5.1
SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_52639| Best HMM Match : 7tm_1 (HMM E-Value=0) 27 6.8
SB_4035| Best HMM Match : DUF1279 (HMM E-Value=0.15) 27 6.8
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 27 8.9
SB_55929| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_42699| Best HMM Match : SIR2 (HMM E-Value=1.6e-12) 27 8.9
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23) 27 8.9
SB_30079| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09) 27 8.9
SB_34643| Best HMM Match : GLTT (HMM E-Value=3.6) 27 8.9
>SB_33724| Best HMM Match : Ribosomal_L44 (HMM E-Value=0)
Length = 113
Score = 124 bits (299), Expect = 3e-29
Identities = 60/106 (56%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Frame = +3
Query: 15 SKMVNVPKQRRTYXXXXXXXXXXXX--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIF 188
S +VNVPKQR+T+ +QYK K AQG+RRYDRKQ G+GGQ+KP+F
Sbjct: 6 SPVVNVPKQRKTFCKGKKCRRHTLHKVTQYKTGKASLFAQGKRRYDRKQSGFGGQTKPVF 65
Query: 189 XXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKGQMI 326
IVLR+EC CK R Q+ LKRCKHFELGGDKKRKGQMI
Sbjct: 66 HKKAKTTKKIVLRMECTQCKYRKQMPLKRCKHFELGGDKKRKGQMI 111
>SB_37591| Best HMM Match : Ribosomal_L44 (HMM E-Value=0.026)
Length = 39
Score = 62.5 bits (145), Expect = 1e-10
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 216 IVLRLECADCKVRSQVALKRCKHFELGGDKKRK 314
IVLR+EC CK R Q+ LKRCKHFELGGDKKRK
Sbjct: 7 IVLRMECTQCKYRKQMPLKRCKHFELGGDKKRK 39
>SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 44.4 bits (100), Expect = 4e-05
Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 11/70 (15%)
Frame = -3
Query: 429 KRRPVNCNTTHYRANW----------VPGPPSCRGLIY*KHLKLGSSVPFSSCHH-QAQS 283
KRRPVNCNTTHYRANW + PP CR I + G + +H ++ S
Sbjct: 6 KRRPVNCNTTHYRANWSSTAVAAALELVDPPGCRNSIDGNGVSDGDGGSGDNDNHRKSDS 65
Query: 282 ACISSMQPVI 253
+ I S Q I
Sbjct: 66 SAIKSSQTEI 75
>SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 44.0 bits (99), Expect = 6e-05
Identities = 23/45 (51%), Positives = 27/45 (60%), Gaps = 11/45 (24%)
Frame = -3
Query: 429 KRRPVNCNTTHYRANW----------VPGPPSCR-GLIY*KHLKL 328
KRRPVNCNTTHYRANW + PP CR +IY ++ L
Sbjct: 65 KRRPVNCNTTHYRANWSSTAVAAALELVDPPGCRNSMIYENYILL 109
>SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 43.6 bits (98), Expect = 7e-05
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 429 KRRPVNCNTTHYRANW 382
KRRPVNCNTTHYRANW
Sbjct: 9 KRRPVNCNTTHYRANW 24
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 43.6 bits (98), Expect = 7e-05
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 429 KRRPVNCNTTHYRANW 382
KRRPVNCNTTHYRANW
Sbjct: 633 KRRPVNCNTTHYRANW 648
>SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 43.6 bits (98), Expect = 7e-05
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 429 KRRPVNCNTTHYRANW 382
KRRPVNCNTTHYRANW
Sbjct: 44 KRRPVNCNTTHYRANW 59
>SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37)
Length = 257
Score = 43.6 bits (98), Expect = 7e-05
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 429 KRRPVNCNTTHYRANW 382
KRRPVNCNTTHYRANW
Sbjct: 6 KRRPVNCNTTHYRANW 21
>SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4)
Length = 117
Score = 43.6 bits (98), Expect = 7e-05
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 429 KRRPVNCNTTHYRANW 382
KRRPVNCNTTHYRANW
Sbjct: 46 KRRPVNCNTTHYRANW 61
>SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 43.6 bits (98), Expect = 7e-05
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 429 KRRPVNCNTTHYRANW 382
KRRPVNCNTTHYRANW
Sbjct: 1884 KRRPVNCNTTHYRANW 1899
>SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 43.6 bits (98), Expect = 7e-05
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 429 KRRPVNCNTTHYRANW 382
KRRPVNCNTTHYRANW
Sbjct: 44 KRRPVNCNTTHYRANW 59
>SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40)
Length = 768
Score = 43.6 bits (98), Expect = 7e-05
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 429 KRRPVNCNTTHYRANW 382
KRRPVNCNTTHYRANW
Sbjct: 38 KRRPVNCNTTHYRANW 53
>SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 43.6 bits (98), Expect = 7e-05
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 429 KRRPVNCNTTHYRANW 382
KRRPVNCNTTHYRANW
Sbjct: 87 KRRPVNCNTTHYRANW 102
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 43.6 bits (98), Expect = 7e-05
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 429 KRRPVNCNTTHYRANW 382
KRRPVNCNTTHYRANW
Sbjct: 65 KRRPVNCNTTHYRANW 80
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 43.6 bits (98), Expect = 7e-05
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 429 KRRPVNCNTTHYRANW 382
KRRPVNCNTTHYRANW
Sbjct: 76 KRRPVNCNTTHYRANW 91
>SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 43.6 bits (98), Expect = 7e-05
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 429 KRRPVNCNTTHYRANW 382
KRRPVNCNTTHYRANW
Sbjct: 52 KRRPVNCNTTHYRANW 67
>SB_4159| Best HMM Match : Vpu (HMM E-Value=2)
Length = 779
Score = 43.6 bits (98), Expect = 7e-05
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 429 KRRPVNCNTTHYRANW 382
KRRPVNCNTTHYRANW
Sbjct: 76 KRRPVNCNTTHYRANW 91
>SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8)
Length = 142
Score = 39.9 bits (89), Expect = 9e-04
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +1
Query: 367 GGARYPIRPIVSRITIHWPSF 429
GGA PIRPIVSRITIHWP+F
Sbjct: 36 GGA--PIRPIVSRITIHWPAF 54
>SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5)
Length = 131
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1
Query: 367 GGARYPIRPIVSRITIHWPSF 429
GGA PIRPIVS ITIHWPSF
Sbjct: 38 GGA--PIRPIVSHITIHWPSF 56
>SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6)
Length = 237
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 429 KRRPVNCNTTHYRAN 385
KRRPVNCNTTHYRAN
Sbjct: 83 KRRPVNCNTTHYRAN 97
>SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 429 KRRPVNCNTTHYRAN 385
KRRPVNCNTTHYRAN
Sbjct: 26 KRRPVNCNTTHYRAN 40
>SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 37.1 bits (82), Expect = 0.006
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 385 IRPIVSRITIHWPSF 429
IRPIVSRITIHWPSF
Sbjct: 18 IRPIVSRITIHWPSF 32
>SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 32.7 bits (71), Expect = 0.14
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 385 IRPIVSRITIHWPSF 429
+RP+VSRITIHW SF
Sbjct: 33 LRPVVSRITIHWTSF 47
>SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 31.1 bits (67), Expect = 0.42
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 340 LLINKTPARGGARYPIRPIVSRITIHWPSF 429
L++ + P R + P +SRITIHWPSF
Sbjct: 63 LVLERPPPRWSSN---SPYMSRITIHWPSF 89
>SB_57013| Best HMM Match : Pico_P2A (HMM E-Value=3.2)
Length = 474
Score = 24.6 bits (51), Expect(2) = 2.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 252 RSQVALKRCKHFELGGD 302
+S++A RC H LGGD
Sbjct: 419 QSRIAFPRCAHGPLGGD 435
Score = 22.2 bits (45), Expect(2) = 2.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 105 SKERHAAQGRRRYDRKQQGYGGQSKPIF 188
++ RH + RRRY + G QS+ F
Sbjct: 397 AERRHNGRDRRRYGQPDSGDVRQSRIAF 424
>SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1442
Score = 27.9 bits (59), Expect = 3.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 228 LECADCKVRSQVALKRCKHFELG 296
+EC +CK R +A C HF+ G
Sbjct: 1113 IECPNCKFRYDLAKGGCMHFKCG 1135
>SB_29219| Best HMM Match : 7tm_1 (HMM E-Value=9.8e-06)
Length = 863
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 385 LGTGPPLVPGSYLLEAFKIGIICPFLFLS 299
LG PL+PG L F I I+ P L +S
Sbjct: 687 LGFFTPLIPGKISLTLFSIYILLPLLIMS 715
>SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1289
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +1
Query: 4 AERTQKW*TYQNSAGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNP 183
AE +W T + + +K + + K R T P + D+ +R+T VSP
Sbjct: 1021 AESFHRWLTQRQFCAQYSKELASGKTNREWVTALPIV-----ISDINATKTRMTGVSPKD 1075
Query: 184 SSKRRQKPLR 213
+ K R+ PL+
Sbjct: 1076 AIKLRRVPLK 1085
>SB_52318| Best HMM Match : Pox_A32 (HMM E-Value=0.066)
Length = 716
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 162 NPAVYDHNVFYPGQRAFPWTF-CTVIPCVLCGIYIFCSTSCA 40
+P + DH VFYP P TF T+ P + I ++ ST+ A
Sbjct: 167 HPILNDHGVFYPKALPHPLTFEITLAP--VSDIVVYSSTTPA 206
>SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 400 SRITIHWPSF 429
SRITIHWPSF
Sbjct: 2 SRITIHWPSF 11
>SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 400 SRITIHWPSF 429
SRITIHWPSF
Sbjct: 2 SRITIHWPSF 11
>SB_22849| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1359
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 162 NPAVYDHNVFYPGQRAFPWTFCTVIPCVLCGIYIFCSTSCA 40
+P + DH VFYP P TF + + I ++ ST+ A
Sbjct: 1172 HPILNDHGVFYPKALPHPLTF-EITLATVSDIVVYSSTTPA 1211
>SB_11815| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.002)
Length = 1725
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 162 NPAVYDHNVFYPGQRAFPWTF-CTVIPCVLCGIYIFCSTSCA 40
+P + DH VFYP P TF T+ P + I ++ ST+ A
Sbjct: 1243 HPILNDHGVFYPKALPHPLTFEITLAP--VSDIVVYSSTTQA 1282
>SB_11515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 400 SRITIHWPSF 429
SRITIHWPSF
Sbjct: 2 SRITIHWPSF 11
>SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 400 SRITIHWPSF 429
SRITIHWPSF
Sbjct: 2 SRITIHWPSF 11
>SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 400 SRITIHWPSF 429
SRITIHWPSF
Sbjct: 2 SRITIHWPSF 11
>SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 400 SRITIHWPSF 429
SRITIHWPSF
Sbjct: 2 SRITIHWPSF 11
>SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 400 SRITIHWPSF 429
SRITIHWPSF
Sbjct: 2 SRITIHWPSF 11
>SB_14409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 400 SRITIHWPSF 429
SRITIHWPSF
Sbjct: 2 SRITIHWPSF 11
>SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 400 SRITIHWPSF 429
SRITIHWPSF
Sbjct: 2 SRITIHWPSF 11
>SB_8267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 400 SRITIHWPSF 429
SRITIHWPSF
Sbjct: 2 SRITIHWPSF 11
>SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 400 SRITIHWPSF 429
SRITIHWPSF
Sbjct: 2 SRITIHWPSF 11
>SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2)
Length = 98
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 400 SRITIHWPSF 429
SRITIHWPSF
Sbjct: 2 SRITIHWPSF 11
>SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 400 SRITIHWPSF 429
SRITIHWPSF
Sbjct: 2 SRITIHWPSF 11
>SB_52639| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 359
Score = 27.1 bits (57), Expect = 6.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 414 NCNTTHYRANWVPGPPSCRGLIY*KHLKLGSSV 316
N T Y +WV GP C+ ++Y + + + SSV
Sbjct: 82 NMITEQYIRHWVFGPIVCKLVVYLQSVSVASSV 114
>SB_4035| Best HMM Match : DUF1279 (HMM E-Value=0.15)
Length = 1575
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 88 YHSTKSPRK-GTLPRVEDV--MIVNSRVTVVSPNPSSKRRQK 204
Y + P+K G RV+++ ++ R T+ PN S RRQ+
Sbjct: 1011 YEAAWDPKKSGNTERVQELQGVVTTDRQTIDDPNTSESRRQE 1052
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 26.6 bits (56), Expect = 8.9
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 76 KYTRYHS-TKSPRKGTLPRVEDVMI--VNSRVTVVSPNPSSKRRQ 201
K TRY S T S R P ++ + +NS SP+PS+KR +
Sbjct: 2061 KSTRYSSRTSSNRDSRTPPADEKIRADINSNEVQSSPSPSTKREE 2105
>SB_55929| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -2
Query: 127 WAACLSLDFLYCDTLCTLWHLHFLQYVLRCFG 32
W L F+ C TLC W + Y R G
Sbjct: 283 WIGAWWLGFVICGTLCIFWSIWLFGYPKRIPG 314
>SB_42699| Best HMM Match : SIR2 (HMM E-Value=1.6e-12)
Length = 501
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 102 KSKERHAAQGRRRYDRKQQGY 164
K K+RHA Q YD+K Q Y
Sbjct: 471 KQKDRHARQLGINYDKKHQNY 491
>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
Length = 581
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = -2
Query: 388 ELGTGPPLVPGSYLLEAFKIGIICPF---LFLSPPSSKCLHLFNATC 257
+L GP P S ++ + + CP +F +P CLH F C
Sbjct: 124 DLDLGP--TPDSPMMPGSNVNLFCPLCHEMFANPRLLPCLHTFCKRC 168
>SB_30079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 877
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 252 RSQVALKRCKHFELGGDKKR 311
+S++A RC H LGGD +R
Sbjct: 495 QSRIASPRCAHRPLGGDSRR 514
>SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09)
Length = 321
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 325 IICPFLFLSPPSSKCLHLFNATCDLTLQSAHSR 227
I+C F +P +KCLH F C L +S+
Sbjct: 246 IMCRKTFKNPVVTKCLHYFCEACALQHYKKNSK 278
>SB_34643| Best HMM Match : GLTT (HMM E-Value=3.6)
Length = 399
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -3
Query: 138 VFYPGQRAFPWTFCTVIPCVLCGIYIFCSTSCAVLV 31
VFYP P V+ C+ + + C C +LV
Sbjct: 105 VFYPPSNGLPVFTLLVMDCLCFTLLVMCYLCCTLLV 140
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,986,791
Number of Sequences: 59808
Number of extensions: 302969
Number of successful extensions: 1134
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 847047381
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -