Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304E12f
(437 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal... 126 3e-29
CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein. 126 3e-29
BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein L36a-... 126 3e-29
BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein L36a-... 126 3e-29
BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein L36a-... 126 3e-29
BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein L36a-... 126 3e-29
AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein L36a-... 126 3e-29
U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protei... 125 8e-29
CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein. 125 8e-29
BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a ... 125 8e-29
BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a ... 125 8e-29
BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a ... 125 8e-29
BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a ... 125 8e-29
AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting ... 125 8e-29
AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing prot... 125 8e-29
AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a ... 125 8e-29
BC058160-1|AAH58160.1| 25|Homo sapiens LOC554234 protein protein. 40 0.004
AL831918-1|CAD38579.1| 810|Homo sapiens hypothetical protein pr... 29 5.3
AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific prot... 29 5.3
AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein. 29 5.3
Y00706-1|CAA68698.1| 1212|Homo sapiens protein ( Human mRNA for ... 29 9.3
M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen ... 29 9.3
BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein. 29 9.3
BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein. 29 9.3
AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha ... 29 9.3
AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha ... 29 9.3
AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha ... 29 9.3
AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha ... 29 9.3
AB209646-1|BAD92883.1| 847|Homo sapiens COL4A1 protein variant ... 29 9.3
>M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal
protein mRNA, complete cds. ).
Length = 106
Score = 126 bits (304), Expect = 3e-29
Identities = 61/104 (58%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 200
MVNVPK RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 201 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMI 326
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+I
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVI 104
>CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein.
Length = 106
Score = 126 bits (304), Expect = 3e-29
Identities = 61/104 (58%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 200
MVNVPK RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 201 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMI 326
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+I
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVI 104
>BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 126 bits (304), Expect = 3e-29
Identities = 61/104 (58%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 200
MVNVPK RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 201 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMI 326
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+I
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVI 104
>BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 126 bits (304), Expect = 3e-29
Identities = 61/104 (58%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 200
MVNVPK RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 201 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMI 326
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+I
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVI 104
>BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 126 bits (304), Expect = 3e-29
Identities = 61/104 (58%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 200
MVNVPK RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 201 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMI 326
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+I
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVI 104
>BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 126 bits (304), Expect = 3e-29
Identities = 61/104 (58%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 200
MVNVPK RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 201 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMI 326
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+I
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVI 104
>AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 126 bits (304), Expect = 3e-29
Identities = 61/104 (58%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 200
MVNVPK RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 201 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMI 326
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+I
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVI 104
>U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protein
protein.
Length = 106
Score = 125 bits (301), Expect = 8e-29
Identities = 60/104 (57%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 200
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 201 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMI 326
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+I
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVI 104
>CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein.
Length = 106
Score = 125 bits (301), Expect = 8e-29
Identities = 60/104 (57%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 200
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 201 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMI 326
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+I
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVI 104
>BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 125 bits (301), Expect = 8e-29
Identities = 60/104 (57%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 200
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 201 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMI 326
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+I
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVI 104
>BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 125 bits (301), Expect = 8e-29
Identities = 60/104 (57%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 200
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 201 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMI 326
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+I
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVI 104
>BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 125 bits (301), Expect = 8e-29
Identities = 60/104 (57%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 200
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 201 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMI 326
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+I
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVI 104
>BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 125 bits (301), Expect = 8e-29
Identities = 60/104 (57%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 200
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 201 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMI 326
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+I
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVI 104
>AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting
protein 15 protein.
Length = 106
Score = 125 bits (301), Expect = 8e-29
Identities = 60/104 (57%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 200
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 201 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMI 326
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+I
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVI 104
>AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing protein
6 protein.
Length = 106
Score = 125 bits (301), Expect = 8e-29
Identities = 60/104 (57%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 200
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 201 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMI 326
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+I
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVI 104
>AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 125 bits (301), Expect = 8e-29
Identities = 60/104 (57%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 200
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 201 XXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMI 326
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+I
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVI 104
>BC058160-1|AAH58160.1| 25|Homo sapiens LOC554234 protein protein.
Length = 25
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +3
Query: 261 VALKRCKHFELGGDKKRKGQMI 326
+ +KR KHF+LGGDKKRKGQ+I
Sbjct: 2 LTIKRYKHFKLGGDKKRKGQVI 23
>AL831918-1|CAD38579.1| 810|Homo sapiens hypothetical protein
protein.
Length = 810
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 183 WVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVL 76
W+W D+ + D N+F F W C+ IP L
Sbjct: 538 WIWHDNMQ-FLQDKNIFEHTYFGFMWQLCSCIPSTL 572
>AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific
proteinase 34 protein.
Length = 3395
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 183 WVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVL 76
W+W D+ + D N+F F W C+ IP L
Sbjct: 2109 WIWHDNMQ-FLQDKNIFEHTYFGFMWQLCSCIPSTL 2143
>AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein.
Length = 3412
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 183 WVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVL 76
W+W D+ + D N+F F W C+ IP L
Sbjct: 2126 WIWHDNMQ-FLQDKNIFEHTYFGFMWQLCSCIPSTL 2160
>Y00706-1|CAA68698.1| 1212|Homo sapiens protein ( Human mRNA for
alpha1 chain of basement membrane (type IV) collagen.in
neoplastic tissue). ).
Length = 1212
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 297 GDKKRKGQMIPILNASNK*DPGTRGGP 377
GD+ KGQ+ PI ++ DPGT G P
Sbjct: 906 GDQGEKGQIGPIGEKGSRGDPGTPGVP 932
>M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen
protein.
Length = 1669
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 297 GDKKRKGQMIPILNASNK*DPGTRGGP 377
GD+ KGQ+ PI ++ DPGT G P
Sbjct: 951 GDQGEKGQIGPIGEKGSRGDPGTPGVP 977
>BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein.
Length = 1669
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 297 GDKKRKGQMIPILNASNK*DPGTRGGP 377
GD+ KGQ+ PI ++ DPGT G P
Sbjct: 951 GDQGEKGQIGPIGEKGSRGDPGTPGVP 977
>BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein.
Length = 1075
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 297 GDKKRKGQMIPILNASNK*DPGTRGGP 377
GD+ KGQ+ PI ++ DPGT G P
Sbjct: 357 GDQGEKGQIGPIGEKGSRGDPGTPGVP 383
>AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 297 GDKKRKGQMIPILNASNK*DPGTRGGP 377
GD+ KGQ+ PI ++ DPGT G P
Sbjct: 600 GDQGEKGQIGPIGEKGSRGDPGTPGVP 626
>AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 297 GDKKRKGQMIPILNASNK*DPGTRGGP 377
GD+ KGQ+ PI ++ DPGT G P
Sbjct: 951 GDQGEKGQIGPIGEKGSRGDPGTPGVP 977
>AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 297 GDKKRKGQMIPILNASNK*DPGTRGGP 377
GD+ KGQ+ PI ++ DPGT G P
Sbjct: 600 GDQGEKGQIGPIGEKGSRGDPGTPGVP 626
>AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 297 GDKKRKGQMIPILNASNK*DPGTRGGP 377
GD+ KGQ+ PI ++ DPGT G P
Sbjct: 951 GDQGEKGQIGPIGEKGSRGDPGTPGVP 977
>AB209646-1|BAD92883.1| 847|Homo sapiens COL4A1 protein variant
protein.
Length = 847
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 297 GDKKRKGQMIPILNASNK*DPGTRGGP 377
GD+ KGQ+ PI ++ DPGT G P
Sbjct: 129 GDQGEKGQIGPIGEKGSRGDPGTPGVP 155
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,822,980
Number of Sequences: 237096
Number of extensions: 1439266
Number of successful extensions: 3125
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3109
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -