Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304E11f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22127| Best HMM Match : LRR_1 (HMM E-Value=1.1e-08) 138 3e-33
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 56 2e-08
SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15) 46 1e-05
SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27) 45 3e-05
SB_21459| Best HMM Match : LRR_1 (HMM E-Value=1.8e-11) 44 1e-04
SB_35937| Best HMM Match : LRR_1 (HMM E-Value=7.1e-09) 44 1e-04
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 43 1e-04
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_41385| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21) 42 3e-04
SB_5807| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14) 38 0.004
SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34) 37 0.012
SB_14995| Best HMM Match : LRR_1 (HMM E-Value=4e-13) 37 0.012
SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17) 36 0.015
SB_27801| Best HMM Match : LRR_1 (HMM E-Value=2.8e-15) 36 0.027
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 35 0.047
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 35 0.047
SB_11899| Best HMM Match : LRR_1 (HMM E-Value=1.2e-20) 34 0.062
SB_28448| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_57283| Best HMM Match : HEAT (HMM E-Value=6.3) 30 1.3
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_8041| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06) 29 2.3
SB_32038| Best HMM Match : ILVD_EDD (HMM E-Value=3.50002e-41) 29 3.1
SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31) 29 3.1
SB_49841| Best HMM Match : Extensin_2 (HMM E-Value=0.29) 28 4.1
SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13) 28 4.1
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 27 7.1
SB_59127| Best HMM Match : ATP-synt_F6 (HMM E-Value=2.7) 27 7.1
SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_53051| Best HMM Match : rve (HMM E-Value=1.3e-14) 27 7.1
SB_54025| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_30509| Best HMM Match : TSP_1 (HMM E-Value=0.00019) 27 9.4
SB_6580| Best HMM Match : SAC3_GANP (HMM E-Value=2.1) 27 9.4
>SB_22127| Best HMM Match : LRR_1 (HMM E-Value=1.1e-08)
Length = 175
Score = 138 bits (333), Expect = 3e-33
Identities = 59/118 (50%), Positives = 87/118 (73%)
Frame = +2
Query: 17 GNLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRL 196
G LKNLQ+L R+NDLI +P E+G+L LRELH+Q NRL+VLPPE+G L+L S + V +
Sbjct: 57 GQLKNLQVLVFRDNDLISLPPEIGELKSLRELHIQNNRLMVLPPELGALNLGSPRHVFKA 116
Query: 197 EGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAKPPPPPQTVDKSKKASRAR 370
EGN W+ ++DQ+ LGP HV+DY++++ YK +Y +H+ + PP PP +K K + ++R
Sbjct: 117 EGNPWIQQLDDQIILGPFHVMDYIKTDGYKTVYEKHLES-PPMPPAKEEKFKVSKKSR 173
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 80 ELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEGN--FWVPPIEDQLK 238
++ L +LR L+ N ++PPEIG L N VL N +PP +LK
Sbjct: 32 DISNLTQLRALYFGDNDFEMIPPEIGQL---KNLQVLVFRDNDLISLPPEIGELK 83
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 55.6 bits (128), Expect = 2e-08
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEG 202
L NL L +R+N L +P +G+ RL+ L LQGN+L +LP E+G L ++ S + L G
Sbjct: 127 LINLVWLDLRDNQLENLPNSIGEHGRLKTLLLQGNKLKILPLELG---LLNSLSAISLSG 183
Query: 203 NFWVPPIEDQLKLGPSHVLDYL 268
N P ED +K G +++ +L
Sbjct: 184 NPIEDPPEDVIKEGVTNIQVFL 205
>SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15)
Length = 272
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSV 187
L++LQ+L + N L +P+ +G L+ L+ L +QGN L LP EIG L L + +V
Sbjct: 86 LRSLQVLDVANNKLKSLPKAIGGLSSLQTLDVQGNNLQSLPLEIGNLKLLRSLNV 140
>SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTL 163
L LQ L + N IE+P LG+L L+EL+LQ N + +LP E+G L
Sbjct: 45 LYTLQSLELSYNGFIELPPALGELVNLQELYLQHNSIELLPDELGNL 91
Score = 36.3 bits (80), Expect = 0.015
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 17 GNLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLP 145
GNL NL+ L + N L +VP G+ +L L++ GN + V+P
Sbjct: 89 GNLVNLKRLGLAHNKLNDVPLYFGKFRQLEWLNISGNAIEVVP 131
Score = 34.7 bits (76), Expect = 0.047
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 17 GNLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIG 157
G L NLQ L ++ N + +P ELG L L+ L L N+L +P G
Sbjct: 66 GELVNLQELYLQHNSIELLPDELGNLVNLKRLGLAHNKLNDVPLYFG 112
>SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +2
Query: 17 GNLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDL 169
G+ L +LS+R+N L +P E+G L L + GNRL LP IGTL L
Sbjct: 25 GSCTKLSVLSLRDNLLQRLPTEIGNCRNLHVLDVSGNRLECLPLTIGTLPL 75
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = +2
Query: 17 GNLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRL 196
G L L +L++ N L +P ELG +L L L+ N L LP EIG N VL +
Sbjct: 2 GKLHKLSLLNVDRNRLEVLPVELGSCTKLSVLSLRDNLLQRLPTEIGN---CRNLHVLDV 58
Query: 197 EGN 205
GN
Sbjct: 59 SGN 61
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 83 LGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEGN 205
+G+L +L L++ NRL VLP E+G+ + SVL L N
Sbjct: 1 MGKLHKLSLLNVDRNRLEVLPVELGS---CTKLSVLSLRDN 38
>SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27)
Length = 309
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEG 202
LK++QIL + +N +I P EL L+RLREL L N+L +LP G L +N VL L
Sbjct: 67 LKHVQILLLNDNQIIMPPVELVYLSRLRELCLDHNQLTLLPSGFGRL---TNLKVLCLSH 123
Query: 203 N 205
N
Sbjct: 124 N 124
>SB_21459| Best HMM Match : LRR_1 (HMM E-Value=1.8e-11)
Length = 137
Score = 43.6 bits (98), Expect = 1e-04
Identities = 38/116 (32%), Positives = 51/116 (43%)
Frame = +2
Query: 17 GNLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRL 196
G L+ L+ L + +N L +P L +L+RLR L L NRL LP EI L N L L
Sbjct: 20 GQLRTLRALYLCDNKLESIPSTLTKLSRLRSLSLHNNRLTTLPVEIVKL---KNLEELSL 76
Query: 197 EGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAKPPPPPQTVDKSKKASR 364
N V + P +L+ L K R+ +K PPQ + A R
Sbjct: 77 RDNPLVVRFVRDMAFKPPSLLE-LSGRCIKNNSVRY--SKEDLPPQLLSYLNSARR 129
Score = 43.2 bits (97), Expect = 1e-04
Identities = 34/97 (35%), Positives = 46/97 (47%)
Frame = +2
Query: 32 LQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEGNFW 211
L+IL + N L+ +P E+GQL LR L+L N+L +P TL S L L N
Sbjct: 2 LEILYLGGNSLLRIPPEVGQLRTLRALYLCDNKLESIP---STLTKLSRLRSLSLHNNRL 58
Query: 212 VPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAKPP 322
+ +KL L LR V + R M+ KPP
Sbjct: 59 TTLPVEIVKLKNLEELS-LRDNPLVVRFVRDMAFKPP 94
>SB_35937| Best HMM Match : LRR_1 (HMM E-Value=7.1e-09)
Length = 224
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEG 202
LK+L++L + N L +P ++G+L LREL+L+GN+L +P I TL L R+
Sbjct: 51 LKDLELLDLSYNRLSFIPADIGKLRALRELNLEGNQLGAMP--ISTLFLP--LKYFRISN 106
Query: 203 NFWVP 217
NF P
Sbjct: 107 NFIHP 111
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEG 202
L NL L + EN L E+P LG+L++LR L+L GN+L L + G LAS + LR++
Sbjct: 85 LGNLTELHLNENSLEELPESLGKLSKLRVLNLTGNKLEKLRDDFGA-GLAS-LTELRIDE 142
Query: 203 N 205
N
Sbjct: 143 N 143
Score = 39.1 bits (87), Expect = 0.002
Identities = 30/87 (34%), Positives = 40/87 (45%)
Frame = +2
Query: 29 NLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEGNF 208
N+ L + NDL +P +LG LA L EL+L GN L LP L N + L L N
Sbjct: 41 NITTLKLDFNDLQRLPDDLGSLASLTELYLTGNLLTSLPDVFARL---GNLTELHLNENS 97
Query: 209 WVPPIEDQLKLGPSHVLDYLRSETYKV 289
E KL VL+ ++ K+
Sbjct: 98 LEELPESLGKLSKLRVLNLTGNKLEKL 124
Score = 35.9 bits (79), Expect = 0.020
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 20 NLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTL 163
NL N++ L + N L E+PR L +L L L L GN+L + ++ L
Sbjct: 424 NLTNVKTLDLYRNKLSEIPRVLLKLENLMRLDLDGNKLKIKADKVPKL 471
Score = 35.1 bits (77), Expect = 0.035
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +2
Query: 17 GNLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLP 145
GNL+ L+++++ +N++ ++P G L L+ + GN + LP
Sbjct: 176 GNLRKLEVVNLSQNNIEKLPESFGFLCCLKSFDITGNHIENLP 218
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 17 GNLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRL 196
GNL +L L + N L +P L ++ L L N+L +P + L+ N L L
Sbjct: 400 GNLTSLVELRLDSNQLSSLPASFANLTNVKTLDLYRNKLSEIPRVLLKLE---NLMRLDL 456
Query: 197 EGN 205
+GN
Sbjct: 457 DGN 459
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLP 145
+ NL L + EN ++ +P + G L L L + NR+ +LP
Sbjct: 333 MANLTKLHLDENQVVCLPDDFGDLVNLEWLDVGQNRIEMLP 373
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 11 HEGNL--KNLQILSMRENDLIEVPRELGQLARLRELHL 118
H G++ K L L + N + ++P +G+L L+ LHL
Sbjct: 268 HFGSISGKTLSSLDLSGNRITKLPDSMGELKELKTLHL 305
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Frame = +2
Query: 17 GNLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIG------TLDLASN 178
G L+ L++L++ EN L +P ELG + L L+ NRLV LP IG ++LASN
Sbjct: 499 GYLRKLRVLNIDENFLESIPSELGSCTAMTILSLRDNRLVHLPDSIGRMPKLQVINLASN 558
Query: 179 K 181
+
Sbjct: 559 R 559
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/43 (37%), Positives = 29/43 (67%)
Frame = +2
Query: 17 GNLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLP 145
G+ + ILS+R+N L+ +P +G++ +L+ ++L NRL LP
Sbjct: 522 GSCTAMTILSLRDNRLVHLPDSIGRMPKLQVINLASNRLEYLP 564
>SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +2
Query: 17 GNLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRL 196
GNL NL+ L M N + +P +G+L ++ + GN L LP EIG ++ + L
Sbjct: 61 GNLINLRTLDMHRNAIKSIPSTIGKLKDVKAIDFSGNSLEKLPAEIGHMEHLQTLN-LNC 119
Query: 197 EGNFWVPPIEDQLKL 241
VPP+ + L
Sbjct: 120 NALTTVPPLRNAKNL 134
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Frame = +2
Query: 17 GNLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPP-----EIGTLDLASNK 181
G LK+++ + N L ++P E+G + L+ L+L N L +PP + LD++ N+
Sbjct: 84 GKLKDVKAIDFSGNSLEKLPAEIGHMEHLQTLNLNCNALTTVPPLRNAKNLARLDISHNR 143
Query: 182 SVLRLEGNF 208
EG F
Sbjct: 144 LESLPEGIF 152
>SB_41385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTL 163
L NL+ L + N L +P E+G L LREL L N L VLP E+G L
Sbjct: 73 LCNLRHLDVSSNKLRSLPAEMGDLVTLRELLLSNNGLRVLPNELGKL 119
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEG 202
L+ L L + +N+L +P ++ +L LR L + N+L LP E+G DL + + +L
Sbjct: 50 LQFLTALFLNDNNLTRIPPDISRLCNLRHLDVSSNKLRSLPAEMG--DLVTLRELLLSNN 107
Query: 203 NFWVPPIE 226
V P E
Sbjct: 108 GLRVLPNE 115
Score = 33.1 bits (72), Expect = 0.14
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +2
Query: 17 GNLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASN 178
G+L L+ L + N L +P ELG+L +L+ L L GN LP EI L+ N
Sbjct: 94 GDLVTLRELLLSNNGLRVLPNELGKLFQLQTLGLSGN---PLPQEILNLNAEVN 144
>SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21)
Length = 791
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +2
Query: 17 GNLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASN 178
GNLK L+ LS+REN + +PR +GQL L L + N + LP I ++ N
Sbjct: 242 GNLKLLERLSLRENKIKILPRVIGQLVHLVTLDISHNHIENLPAGIDEFNIEGN 295
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEI 154
L NL++L + N L ++PR +G L +LR L ++ N+L +P EI
Sbjct: 747 LVNLEVLILSNNLLKKLPRGIGALRKLRVLDIEENKLESIPTEI 790
>SB_5807| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 41.5 bits (93), Expect = 4e-04
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +2
Query: 50 RENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEGN 205
R N+L E+P+E G LA+L +L+L GNRL P I L + VL L GN
Sbjct: 93 RNNNLDELPKEFGSLAKLEKLNLSGNRLESFGPSIFRL---TQLKVLLLGGN 141
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 17 GNLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEI 154
G+L L+ L++ N L + +L +L+ L L GN++ +PP+I
Sbjct: 105 GSLAKLEKLNLSGNRLESFGPSIFRLTQLKVLLLGGNKINNVPPQI 150
>SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDL 169
L NL++L + N L ++PR +G L +LR L ++ N+L +P EIG ++
Sbjct: 322 LVNLEVLILSNNLLKKLPRGIGALRKLRVLDIEENKLESIPTEIGIFEI 370
>SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1243
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEI 154
L+ LQ+L + +N++ +P +L L LREL+L NRL+ LP ++
Sbjct: 189 LEKLQVLILSDNEIGALPADLNALENLRELYLDDNRLMSLPKKL 232
>SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIG 157
L NL+ L +R N + EVP LG L+ L L+GN + LP E+G
Sbjct: 63 LPNLKWLDLRNNHINEVPENLGAHRCLKNLLLEGNNIRTLPFELG 107
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Frame = +2
Query: 41 LSMRENDLIEVPRELGQLARLRELHLQGNRLVVLP-------PEIGTLDLASN 178
L + +LIE+P ++ L L L+L+GN L LP P + LDL +N
Sbjct: 22 LDLNRKNLIEIPPKVLDLQHLEFLYLEGNYLTTLPETLFERLPNLKWLDLRNN 74
>SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14)
Length = 384
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +2
Query: 17 GNLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLD--LASNKSVL 190
G L +L+ L + N L E+P LARL++L L N+L+ LP IG ++ L+ N S
Sbjct: 104 GYLFHLETLFINNNKLRELPDTFCYLARLQKLDLSHNQLLHLPENIGLMESLLSINVSYN 163
Query: 191 RLE 199
LE
Sbjct: 164 ELE 166
>SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34)
Length = 409
Score = 36.7 bits (81), Expect = 0.012
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLD 166
L +L++L + N + E+P + +L L+EL L N++ LPP I L+
Sbjct: 172 LSSLEVLILSGNSIRELPDSIKELVNLKELFLGRNKIRKLPPSITKLE 219
Score = 34.7 bits (76), Expect = 0.047
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +2
Query: 32 LQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTL 163
L LSM NDL+ P E+ +L+ L L L GN + LP I L
Sbjct: 152 LAYLSMENNDLVCFPGEISKLSSLEVLILSGNSIRELPDSIKEL 195
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDL 169
L+NL L++ +N++ E+P + L L+ L N L ++P I L L
Sbjct: 264 LRNLVELNLNKNNIQELPYDFHLLKNLKTLFFSANNLEIVPESICKLPL 312
Score = 30.7 bits (66), Expect = 0.76
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTL 163
L+ LQ+L ++EN L VP ++ + L L++ N + L EI L
Sbjct: 218 LEKLQVLYLQENALDSVPAQVYGIQSLEILNISSNNITSLSDEIRLL 264
>SB_14995| Best HMM Match : LRR_1 (HMM E-Value=4e-13)
Length = 188
Score = 36.7 bits (81), Expect = 0.012
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 20 NLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEI 154
NL+NLQ+L + +N+L +P L L LR L N ++ +P I
Sbjct: 102 NLQNLQVLGLSDNELTILPSVLSNLVNLRILDFSKNGIIDIPETI 146
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 26 KNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTL 163
K L+ + + N L ++PR L L L+ L L N L +LP + L
Sbjct: 81 KALEEVYLDANQLRDLPRGLFNLQNLQVLGLSDNELTILPSVLSNL 126
>SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17)
Length = 267
Score = 36.3 bits (80), Expect = 0.015
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Frame = +2
Query: 17 GNLKNLQILSMRENDLIEVPRELGQLAR-----------LRELHLQGNRLVVLPPEIGTL 163
GN+ NL+ L + N L E+ R++ +A L L LQ N + +PPE+G +
Sbjct: 170 GNMSNLKSLVLNGNPLRELRRDIVMIAVIDVDGLLRMSVLETLDLQNNNISQVPPELGNV 229
Query: 164 DLASNKSVLRLEGNFWVPPIEDQLKLGPSHVLDYLR 271
L+L GN + P L G +L+YLR
Sbjct: 230 ---RGLKALQLGGNPFRTPRAAILAKGTQALLEYLR 262
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRL 196
L++L+ L + ND+ +P ++G ++ L+ L L GN L L +I + + +LR+
Sbjct: 149 LRDLERLDLTNNDISGLPYKIGNMSNLKSLVLNGNPLRELRRDIVMIAVIDVDGLLRM 206
>SB_27801| Best HMM Match : LRR_1 (HMM E-Value=2.8e-15)
Length = 318
Score = 35.5 bits (78), Expect = 0.027
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2
Query: 20 NLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLAS 175
N KNL L + +N L +P +G++ LR GN L VLP + L L S
Sbjct: 230 NFKNLVHLKLDDNGLHLLPIHMGRMTSLRFFSASGNNLRVLPLSLSKLRLDS 281
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 29 NLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTL 163
+L++L +REN + +P L L L N L +LP +G +
Sbjct: 210 SLKVLDLRENSIKSLPSVFCNFKNLVHLKLDDNGLHLLPIHMGRM 254
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 34.7 bits (76), Expect = 0.047
Identities = 18/68 (26%), Positives = 40/68 (58%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEG 202
L++L+ L + EN++ +P E+ +L L+ +++ N+L LP + L + + V+R
Sbjct: 168 LQSLEKLLLMENNITVLPAEIAKLPNLQFVNVFDNKLTRLPESLTDLG-PTTRIVVRGNN 226
Query: 203 NFWVPPIE 226
+ +PP++
Sbjct: 227 HLQMPPLD 234
Score = 33.9 bits (74), Expect = 0.082
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 20 NLKNLQILSMRENDLI--EVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLR 193
NL +L + + NDL +P E QL +L++L+L +L LP +IG L L+
Sbjct: 73 NLVHLSDIDLSSNDLSLNGLPNEFFQLPKLKQLYLNDCQLKTLPSDIGHLRTLEG---LQ 129
Query: 194 LEGNF 208
L NF
Sbjct: 130 LNDNF 134
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 34.7 bits (76), Expect = 0.047
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 29 NLQILSMRENDLIEVPRE-LGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEGN 205
NL + + N L E+P E L L L EL + N LV L PE+ L S + + N
Sbjct: 343 NLVRIDLANNSLHELPEELLNTLPLLEELDVSNNNLVSL-PEVSNLSFMSLEKLFAQRNN 401
Query: 206 F-WVPPIEDQLK 238
WV QLK
Sbjct: 402 LTWVSSSLFQLK 413
>SB_11899| Best HMM Match : LRR_1 (HMM E-Value=1.2e-20)
Length = 681
Score = 34.3 bits (75), Expect = 0.062
Identities = 31/95 (32%), Positives = 45/95 (47%)
Frame = +2
Query: 5 IRHEGNLKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKS 184
I+H NL+ L L + +N + E+ L L LR L L NR+ +I L+ +
Sbjct: 178 IQHLANLRRLIFLDIYDNQIEEI-SGLSSLKSLRVLMLGKNRI----RKINNLEALTKLD 232
Query: 185 VLRLEGNFWVPPIEDQLKLGPSHVLDYLRSETYKV 289
VL L GN + IE+ L VL+ +E KV
Sbjct: 233 VLDLHGN-RISKIENLSHLTELRVLNLAGNEILKV 266
>SB_28448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +2
Query: 143 PPEIGTLDLASNKSVLRLEGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHM----S 310
P EI T+D+ S +L E P+ +Q K L + + YS H+ +
Sbjct: 716 PDEIKTVDIESTPLLLEFE----TVPLGEQGKA----TLVMTNTSAIRARYSLHVEHFKA 767
Query: 311 AKPPPPPQTVDKSKKASR 364
AKPP PP+ K+K + R
Sbjct: 768 AKPPSPPEGQPKNKNSRR 785
>SB_57283| Best HMM Match : HEAT (HMM E-Value=6.3)
Length = 378
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 257 LDYLRSETYKVLYSRHMSAKPPPPPQ 334
++Y R + L S+ M + PPPPPQ
Sbjct: 221 IEYARPSNKRPLLSQRMRSPPPPPPQ 246
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 7/72 (9%)
Frame = +3
Query: 78 GSWGSWRASASCT--CRG---TASSCCRRRSEHWTSP-ATSQC*GWKVTS-GFRPSKTSS 236
G W W A SC+ C G + C + +E A Q G + S P T
Sbjct: 323 GEWSEWGAWTSCSSSCGGGKRRSRRACEKTTEILVKGGAGCQGSGLREESCNLAPCPTHG 382
Query: 237 SWGRPTCWTICA 272
WG T WT C+
Sbjct: 383 GWGAWTSWTRCS 394
>SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPP--EIGTLDLASNKSV 187
L NL+ L++ N + ++ +LREL L+ N + L P I L L NK++
Sbjct: 507 LSNLETLNLASNKITSGQEHTWKMGQLRELSLRDNNDLTLDPYTPITLLQLDVNKAM 563
>SB_8041| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06)
Length = 192
Score = 29.1 bits (62), Expect = 2.3
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = +2
Query: 32 LQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEGNFW 211
L++L + N+L + L L+ L LQGN + L EI L N + L+GN
Sbjct: 89 LELLDLSFNELSTIDPVLLDFPNLKILCLQGNNISDL-HEIDKLAALPNLHTISLQGN-- 145
Query: 212 VPPIED 229
PIED
Sbjct: 146 --PIED 149
>SB_32038| Best HMM Match : ILVD_EDD (HMM E-Value=3.50002e-41)
Length = 508
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 134 VVLPPEIGTLDLASNKSVLRLEGNFWVPPIE 226
VV+ P LDL N+ VL WVPP++
Sbjct: 455 VVIDPTTCALDLEVNEDVLAARRARWVPPVK 485
>SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31)
Length = 870
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRE-LGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLE 199
L N+ +L + N++ E+ + LAR+ L + N+L LP + L L +
Sbjct: 538 LGNITVLELSNNEIKELNMTFVDSLARVVNLAINDNKLKYLPRGVTNLTAREGFRSLSIS 597
Query: 200 GNFWV 214
NF+V
Sbjct: 598 HNFFV 602
>SB_49841| Best HMM Match : Extensin_2 (HMM E-Value=0.29)
Length = 1841
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 7/70 (10%)
Frame = +3
Query: 84 WGSWRASASCTCRGTASSCCRRRSEHWTSPA----TSQC*GWKVTSGFRP--SKTSSSW- 242
W +W + SC R C H T P + GW T R + T+S W
Sbjct: 585 WLAWNPALSCLMR---QFNCTTSGWHGTPPCCAIRANTTGGWHGTPPCRAIRASTTSGWH 641
Query: 243 GRPTCWTICA 272
G P C +CA
Sbjct: 642 GTPPCCALCA 651
>SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13)
Length = 335
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +2
Query: 23 LKNLQILSMRENDLIEVPRELGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEG 202
L NLQ L + N+ IEV L +L +L++L L NR+ +I +D +N V +
Sbjct: 86 LVNLQWLDLSFNN-IEVIEGLDKLTKLKDLTLYNNRIT----KIENMDSLTNLHVFSIGN 140
Query: 203 N 205
N
Sbjct: 141 N 141
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Frame = +3
Query: 78 GSWGSWRASASCTCRGTASSCCRRRSEHWTSPAT--SQC*GWKVTSG---FRPSKTSSSW 242
G WG+W SC+ R R + +P + C G K +G F P + ++
Sbjct: 1137 GKWGAWSDWGSCSASCGPGKRIRTRECNDPAPKSGGKMCEGAKQQTGHCEFSPCPINGNY 1196
Query: 243 GRPTCWTICAQRP 281
+ WT C RP
Sbjct: 1197 TEWSKWTEC-DRP 1208
>SB_59127| Best HMM Match : ATP-synt_F6 (HMM E-Value=2.7)
Length = 479
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 272 SETYKVLYSRHMSAKPPPPPQTVDKSKKASRA 367
S+ Y++ YS + A PPP +T++ + A A
Sbjct: 148 SQPYRIWYSLEVQASAPPPEKTLEVTCAAHSA 179
>SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 565
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +3
Query: 126 TASSCCRRRSEH--WTSPATSQC*GWKVTSGFRPSKTSSSWGRPTCWTICAQRPTKS 290
T ++C H W P T+ W P+KT ++W PT C PTK+
Sbjct: 292 TQANCGHPTKTHANWCHPTTTHA-NWCY-----PTKTQANWCHPTKTQACLCHPTKT 342
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 159 HWTSPATSQC*GWKVTSGFRPSKTSSSWGRPTCWTICAQRPTKS 290
+W P+ +Q W + PSKT S+W P+ PTK+
Sbjct: 265 NWYHPSKTQA-NW-----YHPSKTQSNWNHPSKTQANCGHPTKT 302
>SB_53051| Best HMM Match : rve (HMM E-Value=1.3e-14)
Length = 1624
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +3
Query: 42 CRCARTT*SKFPGSWGSWRASASCTCRGTASSCCRRRSEHW 164
CRC F ASC+ S C RRR+ HW
Sbjct: 488 CRCTLCDKRGFSACRSGGLRCASCS-HAMRSMCTRRRARHW 527
>SB_54025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 59
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1
Query: 509 LRARDYPSLENKDR 468
LRARD PSLENK R
Sbjct: 37 LRARDIPSLENKRR 50
>SB_30509| Best HMM Match : TSP_1 (HMM E-Value=0.00019)
Length = 448
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +3
Query: 78 GSWGSWRASASCTCRGTASSCCRRRSEHWTSPATS 182
G+WG W + CT + R R +P TS
Sbjct: 199 GNWGDWGPYSECTEKEICLQGTRSRKRECNNPPTS 233
>SB_6580| Best HMM Match : SAC3_GANP (HMM E-Value=2.1)
Length = 1187
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 224 EDQLKLGPSHVLDYLRSETYKVLYSRHMSAKP 319
E L+ SH D +RSE V+ S H +A+P
Sbjct: 305 ESMLRSALSHGQDEIRSEALGVICSTHKTAEP 336
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,225,955
Number of Sequences: 59808
Number of extensions: 257370
Number of successful extensions: 1235
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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