Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304E10f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   0.94 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   2.9  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   5.0  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   6.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.6  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   6.6  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   8.7  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 183 SVSPPQKPVLLAKPSSIPVKAT 248
           S  P  KPV++ KP   P  AT
Sbjct: 182 STKPTNKPVVVTKPPQAPPFAT 203


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 131 HGSGKPEAIGARSDAAEIG 187
           HG+  P+ I  RSD   +G
Sbjct: 48  HGNPTPDIIWVRSDGTAVG 66


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 358 PLPNTGAPVTFP*PRSRVAPE 420
           PLP+ G     P P   VAPE
Sbjct: 71  PLPSDGTTSPEPDPEIPVAPE 91


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +1

Query: 1   RSRKPKRPPQIQRNATPTMTCPETAISSSERRRTNLQRAQ 120
           R+R+ K+P   Q   T     P TA S ++  R   + A+
Sbjct: 210 RTRRVKKPGAKQGAPTAEEKRPRTAFSGAQLARLKHEFAE 249


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 439 FKSKHGHTVENGNLFVQAILNLRPT 513
           F S H H V +  L ++ +  + PT
Sbjct: 347 FCSPHPHKVYDFELLIKGVYQVNPT 371


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 130  LVTIVPFGDSYVAVLNLIWLFLG 62
            + TI+    S+V + N+I  FLG
Sbjct: 1222 IFTIITATSSFVTIHNVIGQFLG 1244


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -2

Query: 367 WGGGDRGKENLLSAKFSWLEDLSAETIGIFDETPVLA 257
           +G  DR      + +  +LE    ET+ +F   P++A
Sbjct: 30  FGDSDRPATFADTLEMKYLERCLMETLRMFPPVPIIA 66


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 427 AAENFKSKHGHTVENGNLFVQAILNL 504
           A+E+F +K G+T+  G +    I +L
Sbjct: 68  ASEDFVTKTGNTIPEGTVLHIHIFDL 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,562
Number of Sequences: 336
Number of extensions: 2214
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)