Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304E10f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   3.6  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   8.2  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +3

Query: 168 QMQLRSVSPPQKPVLLAKPSSIPVKATEKTAKTGVSSKIPIVSAL--KSSSQENLAESRF 341
           Q Q  S  PP+K   L  PSS  ++ +E  A++G     P+   L   + +    A S F
Sbjct: 312 QQQRSSPQPPEKMPRLNPPSSNTIQ-SELLARSGFQPYRPVDERLAHPAGAFPIDAYSAF 370

Query: 342 -SLPRSPP 362
            S+P  PP
Sbjct: 371 GSIPGMPP 378


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 116 HNSDEHGSGKPEAIGARSDAAEIGQSAPKT 205
           HN  E  +GK    G R DA   G +  +T
Sbjct: 307 HNGKEQRTGKDVENGGRGDALVNGNAEIRT 336


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 508,565
Number of Sequences: 2352
Number of extensions: 9033
Number of successful extensions: 36
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)