Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304E10f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110371-1|AAI10372.1| 1506|Homo sapiens VPRBP protein protein. 33 0.61
BC022792-1|AAH22792.1| 1058|Homo sapiens VPRBP protein protein. 33 0.61
AF061935-1|AAG27134.1| 1401|Homo sapiens HIV-1 Vpr-binding prote... 33 0.61
AB018343-1|BAA34520.2| 1521|Homo sapiens KIAA0800 protein protein. 33 0.61
BC021134-1|AAH21134.1| 903|Homo sapiens centrobin, centrosomal ... 32 1.4
BC014055-1|AAH14055.3| 805|Homo sapiens CNTROB protein protein. 32 1.4
AY160227-1|AAO22136.1| 925|Homo sapiens centrobin beta protein. 32 1.4
AY160226-1|AAO22135.1| 903|Homo sapiens centrobin alpha protein. 32 1.4
AF331638-1|AAL56068.2| 903|Homo sapiens PP1221 protein. 32 1.4
AY576779-1|AAT39521.1| 860|Homo sapiens nucleolar protein with ... 31 3.2
BC038670-1|AAH38670.1| 948|Homo sapiens zinc finger CCCH-type c... 30 5.7
AL591380-1|CAH71475.1| 817|Homo sapiens enabled homolog (Drosop... 30 5.7
AL356216-2|CAI22020.1| 817|Homo sapiens enabled homolog (Drosop... 30 5.7
BC045737-1|AAH45737.1| 296|Homo sapiens LOC136288 protein protein. 29 7.5
BC031107-1|AAH31107.1| 365|Homo sapiens LOC136288 protein protein. 29 7.5
Z26317-1|CAA81226.1| 1117|Homo sapiens desmoglein 2 protein. 29 9.9
BC099657-1|AAH99657.1| 1118|Homo sapiens desmoglein 2 protein. 29 9.9
BC099656-1|AAH99656.1| 1118|Homo sapiens desmoglein 2 protein. 29 9.9
BC099655-1|AAH99655.1| 1118|Homo sapiens desmoglein 2 protein. 29 9.9
AF012304-1|AAC33511.1| 194|Homo sapiens nuclear mitotic apparat... 29 9.9
>BC110371-1|AAI10372.1| 1506|Homo sapiens VPRBP protein protein.
Length = 1506
Score = 33.1 bits (72), Expect = 0.61
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Frame = +3
Query: 66 RNSHIKF---RTATYESPKGT-IVTSTDLENRRLSELDQMQLRSVSPPQKPVLLAKPSSI 233
R+ H+KF E G ++ TD+ RL + D + +S P+K +LL + +
Sbjct: 798 RSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRISFPEKELLLLIRNHL 857
Query: 234 PVKATEKTAKT-GVSSKIPIVSALKSS--SQENLAESRFSLPRSP 359
K +TA + +P+ +A SS + A S SLPR+P
Sbjct: 858 ISKGLGETATVLTKEADLPMTAASHSSAFTPVTAAASPVSLPRTP 902
>BC022792-1|AAH22792.1| 1058|Homo sapiens VPRBP protein protein.
Length = 1058
Score = 33.1 bits (72), Expect = 0.61
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Frame = +3
Query: 66 RNSHIKF---RTATYESPKGT-IVTSTDLENRRLSELDQMQLRSVSPPQKPVLLAKPSSI 233
R+ H+KF E G ++ TD+ RL + D + +S P+K +LL + +
Sbjct: 350 RSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRISFPEKELLLLIRNHL 409
Query: 234 PVKATEKTAKT-GVSSKIPIVSALKSS--SQENLAESRFSLPRSP 359
K +TA + +P+ +A SS + A S SLPR+P
Sbjct: 410 ISKGLGETATVLTKEADLPMTAASHSSAFTPVTAAASPVSLPRTP 454
>AF061935-1|AAG27134.1| 1401|Homo sapiens HIV-1 Vpr-binding protein
protein.
Length = 1401
Score = 33.1 bits (72), Expect = 0.61
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Frame = +3
Query: 66 RNSHIKF---RTATYESPKGT-IVTSTDLENRRLSELDQMQLRSVSPPQKPVLLAKPSSI 233
R+ H+KF E G ++ TD+ RL + D + +S P+K +LL + +
Sbjct: 693 RSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRISFPEKELLLLIRNHL 752
Query: 234 PVKATEKTAKT-GVSSKIPIVSALKSS--SQENLAESRFSLPRSP 359
K +TA + +P+ +A SS + A S SLPR+P
Sbjct: 753 ISKGLGETATVLTKEADLPMTAASHSSAFTPVTAAASPVSLPRTP 797
>AB018343-1|BAA34520.2| 1521|Homo sapiens KIAA0800 protein protein.
Length = 1521
Score = 33.1 bits (72), Expect = 0.61
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Frame = +3
Query: 66 RNSHIKF---RTATYESPKGT-IVTSTDLENRRLSELDQMQLRSVSPPQKPVLLAKPSSI 233
R+ H+KF E G ++ TD+ RL + D + +S P+K +LL + +
Sbjct: 813 RSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRISFPEKELLLLIRNHL 872
Query: 234 PVKATEKTAKT-GVSSKIPIVSALKSS--SQENLAESRFSLPRSP 359
K +TA + +P+ +A SS + A S SLPR+P
Sbjct: 873 ISKGLGETATVLTKEADLPMTAASHSSAFTPVTAAASPVSLPRTP 917
>BC021134-1|AAH21134.1| 903|Homo sapiens centrobin, centrosomal
BRCA2 interacting protein protein.
Length = 903
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +3
Query: 159 ELDQMQLRSVSPPQKPVLLAKPSSIPVKATEKTAKTGVSSKIPIVSALKSSSQENLAESR 338
E +Q+ ++ PP P A PSS + EK + V + P+ ALK Q++ E+R
Sbjct: 563 EANQLLSTTLPPPNPPAPPAGPSSPGPQEPEKEERR-VWTMPPMAVALKPVLQQS-REAR 620
Query: 339 FSLPRSPP 362
LP +PP
Sbjct: 621 DELPGAPP 628
>BC014055-1|AAH14055.3| 805|Homo sapiens CNTROB protein protein.
Length = 805
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +3
Query: 159 ELDQMQLRSVSPPQKPVLLAKPSSIPVKATEKTAKTGVSSKIPIVSALKSSSQENLAESR 338
E +Q+ ++ PP P A PSS + EK + V + P+ ALK Q++ E+R
Sbjct: 464 EANQLLSTTLPPPNPPAPPAGPSSPGPQEPEKEERR-VWTMPPMAVALKPVLQQS-REAR 521
Query: 339 FSLPRSPP 362
LP +PP
Sbjct: 522 DELPGAPP 529
>AY160227-1|AAO22136.1| 925|Homo sapiens centrobin beta protein.
Length = 925
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +3
Query: 159 ELDQMQLRSVSPPQKPVLLAKPSSIPVKATEKTAKTGVSSKIPIVSALKSSSQENLAESR 338
E +Q+ ++ PP P A PSS + EK + V + P+ ALK Q++ E+R
Sbjct: 563 EANQLLSTTLPPPNPPAPPAGPSSPGPQEPEKEERR-VWTMPPMAVALKPVLQQS-REAR 620
Query: 339 FSLPRSPP 362
LP +PP
Sbjct: 621 DELPGAPP 628
>AY160226-1|AAO22135.1| 903|Homo sapiens centrobin alpha protein.
Length = 903
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +3
Query: 159 ELDQMQLRSVSPPQKPVLLAKPSSIPVKATEKTAKTGVSSKIPIVSALKSSSQENLAESR 338
E +Q+ ++ PP P A PSS + EK + V + P+ ALK Q++ E+R
Sbjct: 563 EANQLLSTTLPPPNPPAPPAGPSSPGPQEPEKEERR-VWTMPPMAVALKPVLQQS-REAR 620
Query: 339 FSLPRSPP 362
LP +PP
Sbjct: 621 DELPGAPP 628
>AF331638-1|AAL56068.2| 903|Homo sapiens PP1221 protein.
Length = 903
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +3
Query: 159 ELDQMQLRSVSPPQKPVLLAKPSSIPVKATEKTAKTGVSSKIPIVSALKSSSQENLAESR 338
E +Q+ ++ PP P A PSS + EK + V + P+ ALK Q++ E+R
Sbjct: 563 EANQLLSTTLPPPNPPAPPAGPSSPGPQEPEKEERR-VWTMPPMAVALKPVLQQS-REAR 620
Query: 339 FSLPRSPP 362
LP +PP
Sbjct: 621 DELPGAPP 628
>AY576779-1|AAT39521.1| 860|Homo sapiens nucleolar protein with
MIF4G domain 1 protein.
Length = 860
Score = 30.7 bits (66), Expect = 3.2
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +3
Query: 180 RSVSPPQKPVLLAKPSSIPVKATEKTAKTGVSSKIPIVSALKSSSQENLAESR 338
R SPP+KP +PS + KAT TAKT S+ + ++ N E R
Sbjct: 136 RDPSPPRKP----RPSRVKAKATAATAKTRPSAAATAAARKRALLAANEEEDR 184
>BC038670-1|AAH38670.1| 948|Homo sapiens zinc finger CCCH-type
containing 3 protein.
Length = 948
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 195 PQKPVLLAKPSSIPVKATEKTAKTGVSSKIPIVSALKSSSQENLAESRFSLPRSP 359
P+KP +KP S P K K + SS ++SS+++ ++ L RSP
Sbjct: 361 PRKPATSSKPGSAPSKYKWKASSPSASSSSSFRWQSEASSKDHASQLSPVLSRSP 415
>AL591380-1|CAH71475.1| 817|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 817
Score = 29.9 bits (64), Expect = 5.7
Identities = 19/62 (30%), Positives = 24/62 (38%)
Frame = +3
Query: 189 SPPQKPVLLAKPSSIPVKATEKTAKTGVSSKIPIVSALKSSSQENLAESRFSLPRSPPPQ 368
SPP + + PSS P +A S + P+ S L SS S P P Q
Sbjct: 491 SPPPSTPIASTPSSKPSVLPSPSAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQ 550
Query: 369 YG 374
G
Sbjct: 551 QG 552
>AL356216-2|CAI22020.1| 817|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 817
Score = 29.9 bits (64), Expect = 5.7
Identities = 19/62 (30%), Positives = 24/62 (38%)
Frame = +3
Query: 189 SPPQKPVLLAKPSSIPVKATEKTAKTGVSSKIPIVSALKSSSQENLAESRFSLPRSPPPQ 368
SPP + + PSS P +A S + P+ S L SS S P P Q
Sbjct: 491 SPPPSTPIASTPSSKPSVLPSPSAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQ 550
Query: 369 YG 374
G
Sbjct: 551 QG 552
>BC045737-1|AAH45737.1| 296|Homo sapiens LOC136288 protein protein.
Length = 296
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 231 IPVKATEKTAKTGVSSKIPIVSALKSSSQENLAESR 338
+PVK +EK +S+IP +S L S ENL +R
Sbjct: 45 VPVKRSEKAVDAPPASQIPGLSNLGDSHSENLPGTR 80
>BC031107-1|AAH31107.1| 365|Homo sapiens LOC136288 protein protein.
Length = 365
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 231 IPVKATEKTAKTGVSSKIPIVSALKSSSQENLAESR 338
+PVK +EK +S+IP +S L S ENL +R
Sbjct: 94 VPVKRSEKAVDAPPASQIPGLSNLGDSHSENLPGTR 129
>Z26317-1|CAA81226.1| 1117|Homo sapiens desmoglein 2 protein.
Length = 1117
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 219 KPSSIPVKATEKTAKTGVSSKIPIVSALKSSSQENLAESR 338
KP+ IP+K K K G+ K ++S S S + ++ +
Sbjct: 368 KPTPIPIKVKVKNVKEGIHFKSSVISIYVSESMDRSSKGQ 407
>BC099657-1|AAH99657.1| 1118|Homo sapiens desmoglein 2 protein.
Length = 1118
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 219 KPSSIPVKATEKTAKTGVSSKIPIVSALKSSSQENLAESR 338
KP+ IP+K K K G+ K ++S S S + ++ +
Sbjct: 369 KPTPIPIKVKVKNVKEGIHFKSSVISIYVSESMDRSSKGQ 408
>BC099656-1|AAH99656.1| 1118|Homo sapiens desmoglein 2 protein.
Length = 1118
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 219 KPSSIPVKATEKTAKTGVSSKIPIVSALKSSSQENLAESR 338
KP+ IP+K K K G+ K ++S S S + ++ +
Sbjct: 369 KPTPIPIKVKVKNVKEGIHFKSSVISIYVSESMDRSSKGQ 408
>BC099655-1|AAH99655.1| 1118|Homo sapiens desmoglein 2 protein.
Length = 1118
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 219 KPSSIPVKATEKTAKTGVSSKIPIVSALKSSSQENLAESR 338
KP+ IP+K K K G+ K ++S S S + ++ +
Sbjct: 369 KPTPIPIKVKVKNVKEGIHFKSSVISIYVSESMDRSSKGQ 408
>AF012304-1|AAC33511.1| 194|Homo sapiens nuclear mitotic apparatus
protein-retinoic acid receptor alpha fusion protein
protein.
Length = 194
Score = 29.1 bits (62), Expect = 9.9
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 210 LLAKPSSIPV-KATEKTAKTGVSSKIPIVSALKSSSQENLAESRFSLPRSPPP 365
LL+ P P +++ + ++ GVSS P +SSS E + S P SPPP
Sbjct: 36 LLSLPGYRPTTRSSARRSQAGVSSGAPPAIETQSSSSEEIVPS----PPSPPP 84
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,843,064
Number of Sequences: 237096
Number of extensions: 1440163
Number of successful extensions: 4503
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4493
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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