Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304E10f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70309-7|CAB54292.1| 209|Caenorhabditis elegans Hypothetical pr... 31 0.66
L12018-11|AAA65467.1| 348|Caenorhabditis elegans Hypothetical p... 31 0.66
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 29 1.5
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 29 1.5
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 29 1.5
Z72507-9|CAC35886.1| 282|Caenorhabditis elegans Hypothetical pr... 28 3.5
L10986-8|AAA28013.2| 286|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 28 4.7
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 28 4.7
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 28 4.7
Z81054-10|CAB02882.3| 561|Caenorhabditis elegans Hypothetical p... 27 6.2
Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF106582-2|AAC78213.1| 457|Caenorhabditis elegans Hypothetical ... 27 6.2
U80451-6|AAY55867.1| 200|Caenorhabditis elegans Hypothetical pr... 27 8.1
U50192-1|AAZ94735.1| 161|Caenorhabditis elegans Hypothetical pr... 27 8.1
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 27 8.1
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 27 8.1
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 27 8.1
AF016674-4|AAB66130.1| 287|Caenorhabditis elegans Hypothetical ... 27 8.1
AC026301-7|AAK68900.2| 1142|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z70309-7|CAB54292.1| 209|Caenorhabditis elegans Hypothetical
protein R102.8 protein.
Length = 209
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 3 VKKTKTTASDPKKRHSDYDLPRNSHIKFRTATY 101
+KK + T SD KKR S Y LP +++ F +TY
Sbjct: 6 IKKYQLTFSDDKKRESTYVLPESNNF-FNPSTY 37
>L12018-11|AAA65467.1| 348|Caenorhabditis elegans Hypothetical
protein F22B7.1 protein.
Length = 348
Score = 30.7 bits (66), Expect = 0.66
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
Frame = +3
Query: 6 KKTKTTASDPK-KRHSDYDLPRNSHIKFRTATYESPKGT---IVTSTDLENRRLSELDQM 173
K + A +PK RH+ L I A YE+ + I+ ENR+ SELD+
Sbjct: 208 KLNECYAMEPKCVRHALELLNFEQRIDLDLAAYENKFDSVDGIIRERLGENRKSSELDEW 267
Query: 174 QLRSVSPPQKPVLLAKPSSIPVKATEKTAKTGVSSKIP--IVSALKSSSQENLAESR 338
R+ P +L + S I +A ++ GV S + + ++S S E + R
Sbjct: 268 LHRNRPPKALQAILDERSDIEEEALQRLRDNGVLSSLKHYYKAVIESRSHEEQEDIR 324
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 117 TIVTSTDLENRRLSELDQMQLRSVSPPQKPVLLAK 221
+I STD++ RL + +Q+ PP+ PV+L K
Sbjct: 710 SIEKSTDIDKIRLMRKEDLQVIDKCPPRAPVILQK 744
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 117 TIVTSTDLENRRLSELDQMQLRSVSPPQKPVLLAK 221
+I STD++ RL + +Q+ PP+ PV+L K
Sbjct: 710 SIEKSTDIDKIRLMRKEDLQVIDKCPPRAPVILQK 744
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 150 RLSELDQMQLRSVSPPQKPVLLAKPSSIPVKATEKTAK-TGVSSKIPIV 293
++S++D ++L SPPQ PV L +IP + E +S ++P++
Sbjct: 251 KISDMDCLRLADGSPPQIPVALEDHINIPSTSQENPRDIRSLSHQLPMI 299
>Z72507-9|CAC35886.1| 282|Caenorhabditis elegans Hypothetical
protein F17C11.11 protein.
Length = 282
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = -2
Query: 382 PELPYWGGGDRGKENLLSAKFSWLEDLSAETIGIFDE 272
P + YW D+ K+NLL ++ +E+L + + D+
Sbjct: 208 PHVGYWRRVDQLKDNLLDLRYGEIENLDGKDVDEHDD 244
>L10986-8|AAA28013.2| 286|Caenorhabditis elegans Hypothetical
protein F10E9.2 protein.
Length = 286
Score = 28.3 bits (60), Expect = 3.5
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 2/97 (2%)
Frame = +3
Query: 81 KFRTATYESPKGTIVTSTDLENRRLSELDQMQLRSVSPPQKPVLLAKPSSIPVKATEKTA 260
K R +T + KG++ S RR ++ +L KPV+++ P+
Sbjct: 121 KIRGSTRATRKGSVNKSKSGRTRRHKKVPDQRLWYFLYLSKPVVVSLPTDATYHDLMARL 180
Query: 261 KT--GVSSKIPIVSALKSSSQENLAESRFSLPRSPPP 365
T GVS K +++ S E FS P P
Sbjct: 181 YTLLGVSGKTHMITLRTQKSSSEEGEGEFSGRGDPAP 217
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +3
Query: 195 PQKPVLLAKPSSIPVKATEKTAKTGVSSKIPIVSALKSSSQENLAESRFSLPRSPPPQYG 374
P+ V + PS V T T +TG+SS + + ++ E R +P++ PP+ G
Sbjct: 731 PRTEVPMTGPSRTEVPMTV-TPETGLSSTVTSKTEPPKTTTEKRITPRTEVPKTVPPRTG 789
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 27.9 bits (59), Expect = 4.7
Identities = 22/93 (23%), Positives = 38/93 (40%)
Frame = +3
Query: 3 VKKTKTTASDPKKRHSDYDLPRNSHIKFRTATYESPKGTIVTSTDLENRRLSELDQMQLR 182
V++ + + PK+R + PR R SPK + S L + S + R
Sbjct: 150 VERKRRRSPSPKRRRRPSEKPRKRSRSPRRERPRSPKRSREESRKLSRKPSSSRSKSPRR 209
Query: 183 SVSPPQKPVLLAKPSSIPVKATEKTAKTGVSSK 281
S P+K + KPS ++ E+ + S +
Sbjct: 210 SREDPRK--VARKPSRSRSRSAERLRRKSRSPR 240
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 27.9 bits (59), Expect = 4.7
Identities = 22/93 (23%), Positives = 38/93 (40%)
Frame = +3
Query: 3 VKKTKTTASDPKKRHSDYDLPRNSHIKFRTATYESPKGTIVTSTDLENRRLSELDQMQLR 182
V++ + + PK+R + PR R SPK + S L + S + R
Sbjct: 150 VERKRRRSPSPKRRRRPSEKPRKRSRSPRRERPRSPKRSREESRKLSRKPSSSRSKSPRR 209
Query: 183 SVSPPQKPVLLAKPSSIPVKATEKTAKTGVSSK 281
S P+K + KPS ++ E+ + S +
Sbjct: 210 SREDPRK--VARKPSRSRSRSAERLRRKSRSPR 240
>Z81054-10|CAB02882.3| 561|Caenorhabditis elegans Hypothetical
protein F01D4.3 protein.
Length = 561
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 1 RSRKPKRPPQIQRNATPTMTCPETAISSSER 93
+S KPK PP A PT T T +S +
Sbjct: 18 KSNKPKSPPNASPGAAPTSTTKTTKRASGSK 48
>Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical
protein K04D7.4 protein.
Length = 1159
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 13 PKRPPQIQRNATPTMTCPETAISSSERRRTNLQR 114
P RPPQIQ+ T C E I+ + L +
Sbjct: 237 PNRPPQIQKIRNITSECVEVTITPPDEMNGELDK 270
>AF106582-2|AAC78213.1| 457|Caenorhabditis elegans Hypothetical
protein W05F2.2 protein.
Length = 457
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = +3
Query: 105 SPKGTIVTSTDLENRRLSELDQMQLRSVSPPQKPVLLAKPSSIPVKATEKTAK 263
+P+ +V + N ++++ + + +V+PP P L A + P ++ KTA+
Sbjct: 174 TPRAYVVAESKTSNGNVTKVMEKRRSAVAPPITPALGAGSINGPYESRTKTAQ 226
>U80451-6|AAY55867.1| 200|Caenorhabditis elegans Hypothetical
protein F11G11.14 protein.
Length = 200
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 105 SPKGTIVTSTDLEN-RRLSELDQMQLRSVSPPQKPVLLAKPSSIPVKATEKTA 260
+PK T + ++S +++ + ++ PP P ++ S IP+ E TA
Sbjct: 139 TPKAASTCKTQMTTISKVSSMNKTKTCAIGPPTSPPSPSRKSEIPLFVNESTA 191
>U50192-1|AAZ94735.1| 161|Caenorhabditis elegans Hypothetical
protein T23B7.2 protein.
Length = 161
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 105 SPKGTIVTSTDLEN-RRLSELDQMQLRSVSPPQKPVLLAKPSSIPVKATEKTA 260
+PK T + ++S +++ + ++ PP P ++ S IP+ E TA
Sbjct: 107 TPKAASTCKTQMTTISKVSSMNKTKTCAIGPPTSPPSPSRKSEIPLFVNESTA 159
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 102 ESPKGTIVTSTDLENRRLSELDQMQLRSVSPP 197
ESPK TI D+ + ++ D M RS +PP
Sbjct: 24 ESPKHTIEGILDIRKKEMNVSDLMCTRSSTPP 55
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 102 ESPKGTIVTSTDLENRRLSELDQMQLRSVSPP 197
ESPK TI D+ + ++ D M RS +PP
Sbjct: 24 ESPKHTIEGILDIRKKEMNVSDLMCTRSSTPP 55
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 102 ESPKGTIVTSTDLENRRLSELDQMQLRSVSPP 197
ESPK TI D+ + ++ D M RS +PP
Sbjct: 24 ESPKHTIEGILDIRKKEMNVSDLMCTRSSTPP 55
>AF016674-4|AAB66130.1| 287|Caenorhabditis elegans Hypothetical
protein C03H5.3 protein.
Length = 287
Score = 27.1 bits (57), Expect = 8.1
Identities = 24/97 (24%), Positives = 42/97 (43%)
Frame = +3
Query: 30 DPKKRHSDYDLPRNSHIKFRTATYESPKGTIVTSTDLENRRLSELDQMQLRSVSPPQKPV 209
+PK + ++P NS S K + + + EN + + M+ S +P
Sbjct: 126 EPKNDQNPVEIPDNSDSDDDEPMEISSKNPVTSIENPENSDSDDDEPMEATSKAPEMS-- 183
Query: 210 LLAKPSSIPVKATEKTAKTGVSSKIPIVSALKSSSQE 320
+A+P SI K EK A+ S+K+ K S ++
Sbjct: 184 -VAEPKSIIEKLLEKKAEK--SAKLAAKKLKKRSKKK 217
>AC026301-7|AAK68900.2| 1142|Caenorhabditis elegans Hypothetical
protein Y54F10BM.9 protein.
Length = 1142
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 71 QPYQVQNGDVRISKGHNSDEHGSGKPEAIGARSDAAEIGQSAPK 202
Q +VQ+GD + +E+G+ E + A I Q APK
Sbjct: 598 QAGEVQDGDKLQNANIQQEEYGNNLAEEASETLELAHINQDAPK 641
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,515,755
Number of Sequences: 27780
Number of extensions: 217522
Number of successful extensions: 969
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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