Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304E09f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC071702-1|AAH71702.1|  476|Homo sapiens DBC1 protein protein.         30   5.7  
BC065196-1|AAH65196.1|  761|Homo sapiens deleted in bladder canc...    30   5.7  
AL353773-1|CAI16000.1|  761|Homo sapiens deleted in bladder canc...    30   5.7  
AL138894-1|CAH72027.1|  761|Homo sapiens deleted in bladder canc...    30   5.7  
AF027734-1|AAC39691.1|  761|Homo sapiens IB3089A protein.              30   5.7  

>BC071702-1|AAH71702.1|  476|Homo sapiens DBC1 protein protein.
          Length = 476

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = +2

Query: 137 MLPSAAKATPQIDSPSCTLMTRSNVPASSFM*KISFGVEKYNLPLMSLANPLTVKV 304
           + P  A   PQ+D  SC L  R  +  S  + +++  ++ YN  ++  ++ +T K+
Sbjct: 421 LAPPVAPGKPQLDLFSCMLKHRLKLTNSEII-RVNHALDLYNTEILKQSDQMTAKL 475


>BC065196-1|AAH65196.1|  761|Homo sapiens deleted in bladder cancer
           1 protein.
          Length = 761

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = +2

Query: 137 MLPSAAKATPQIDSPSCTLMTRSNVPASSFM*KISFGVEKYNLPLMSLANPLTVKV 304
           + P  A   PQ+D  SC L  R  +  S  + +++  ++ YN  ++  ++ +T K+
Sbjct: 706 LAPPVAPGKPQLDLFSCMLKHRLKLTNSEII-RVNHALDLYNTEILKQSDQMTAKL 760


>AL353773-1|CAI16000.1|  761|Homo sapiens deleted in bladder cancer
           1 protein.
          Length = 761

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = +2

Query: 137 MLPSAAKATPQIDSPSCTLMTRSNVPASSFM*KISFGVEKYNLPLMSLANPLTVKV 304
           + P  A   PQ+D  SC L  R  +  S  + +++  ++ YN  ++  ++ +T K+
Sbjct: 706 LAPPVAPGKPQLDLFSCMLKHRLKLTNSEII-RVNHALDLYNTEILKQSDQMTAKL 760


>AL138894-1|CAH72027.1|  761|Homo sapiens deleted in bladder cancer
           1 protein.
          Length = 761

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = +2

Query: 137 MLPSAAKATPQIDSPSCTLMTRSNVPASSFM*KISFGVEKYNLPLMSLANPLTVKV 304
           + P  A   PQ+D  SC L  R  +  S  + +++  ++ YN  ++  ++ +T K+
Sbjct: 706 LAPPVAPGKPQLDLFSCMLKHRLKLTNSEII-RVNHALDLYNTEILKQSDQMTAKL 760


>AF027734-1|AAC39691.1|  761|Homo sapiens IB3089A protein.
          Length = 761

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = +2

Query: 137 MLPSAAKATPQIDSPSCTLMTRSNVPASSFM*KISFGVEKYNLPLMSLANPLTVKV 304
           + P  A   PQ+D  SC L  R  +  S  + +++  ++ YN  ++  ++ +T K+
Sbjct: 706 LAPPVAPGKPQLDLFSCMLKHRLKLTNSEII-RVNHALDLYNTEILKQSDQMTAKL 760


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,056,373
Number of Sequences: 237096
Number of extensions: 1404875
Number of successful extensions: 2154
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2153
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)