Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304E09f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X67219-1|CAA47659.1|  597|Drosophila melanogaster Rop protein.         29   5.1  
X67218-1|CAA47658.1|  597|Drosophila melanogaster Rop protein.         29   5.1  
U15967-2|AAB60242.1|  597|Drosophila melanogaster Rop protein.         29   5.1  
AY052094-1|AAK93518.1|  597|Drosophila melanogaster SD04216p pro...    29   5.1  
AE014296-773|AAF47844.1|  597|Drosophila melanogaster CG15811-PA...    29   5.1  
BT022488-1|AAY54904.1|  446|Drosophila melanogaster IP11787p pro...    28   6.7  
AE014297-1215|AAF54567.2|  446|Drosophila melanogaster CG14694-P...    28   6.7  
AE014296-1872|AAF50117.3|  410|Drosophila melanogaster CG32079-P...    28   8.8  

>X67219-1|CAA47659.1|  597|Drosophila melanogaster Rop protein.
          Length = 597

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
 Frame = +1

Query: 316 FIQDSIDSFQCKYTSGVSKI---YIVFLADSNQS-CFDVGEF---RYRSYLTVRIDKRFF 474
           F  DS D+FQC Y+   + I   +I  +A+   + C  +GE+   RYRS     ID    
Sbjct: 156 FSLDSPDTFQCLYSPAFASIRSKHIERIAEQIATLCATLGEYPNVRYRSDWDRNIDLAAS 215

Query: 475 VRIESREVEAVDGTM 519
           V+ +    +A D TM
Sbjct: 216 VQQKLDAYKADDATM 230


>X67218-1|CAA47658.1|  597|Drosophila melanogaster Rop protein.
          Length = 597

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
 Frame = +1

Query: 316 FIQDSIDSFQCKYTSGVSKI---YIVFLADSNQS-CFDVGEF---RYRSYLTVRIDKRFF 474
           F  DS D+FQC Y+   + I   +I  +A+   + C  +GE+   RYRS     ID    
Sbjct: 156 FSLDSPDTFQCLYSPAFASIRSKHIERIAEQIATLCATLGEYPNVRYRSDWDRNIDLAAS 215

Query: 475 VRIESREVEAVDGTM 519
           V+ +    +A D TM
Sbjct: 216 VQQKLDAYKADDATM 230


>U15967-2|AAB60242.1|  597|Drosophila melanogaster Rop protein.
          Length = 597

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
 Frame = +1

Query: 316 FIQDSIDSFQCKYTSGVSKI---YIVFLADSNQS-CFDVGEF---RYRSYLTVRIDKRFF 474
           F  DS D+FQC Y+   + I   +I  +A+   + C  +GE+   RYRS     ID    
Sbjct: 156 FSLDSPDTFQCLYSPAFASIRSKHIERIAEQIATLCATLGEYPNVRYRSDWDRNIDLAAS 215

Query: 475 VRIESREVEAVDGTM 519
           V+ +    +A D TM
Sbjct: 216 VQQKLDAYKADDATM 230


>AY052094-1|AAK93518.1|  597|Drosophila melanogaster SD04216p
           protein.
          Length = 597

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
 Frame = +1

Query: 316 FIQDSIDSFQCKYTSGVSKI---YIVFLADSNQS-CFDVGEF---RYRSYLTVRIDKRFF 474
           F  DS D+FQC Y+   + I   +I  +A+   + C  +GE+   RYRS     ID    
Sbjct: 156 FSLDSPDTFQCLYSPAFASIRSKHIERIAEQIATLCATLGEYPNVRYRSDWDRNIDLAAS 215

Query: 475 VRIESREVEAVDGTM 519
           V+ +    +A D TM
Sbjct: 216 VQQKLDAYKADDATM 230


>AE014296-773|AAF47844.1|  597|Drosophila melanogaster CG15811-PA
           protein.
          Length = 597

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
 Frame = +1

Query: 316 FIQDSIDSFQCKYTSGVSKI---YIVFLADSNQS-CFDVGEF---RYRSYLTVRIDKRFF 474
           F  DS D+FQC Y+   + I   +I  +A+   + C  +GE+   RYRS     ID    
Sbjct: 156 FSLDSPDTFQCLYSPAFASIRSKHIERIAEQIATLCATLGEYPNVRYRSDWDRNIDLAAS 215

Query: 475 VRIESREVEAVDGTM 519
           V+ +    +A D TM
Sbjct: 216 VQQKLDAYKADDATM 230


>BT022488-1|AAY54904.1|  446|Drosophila melanogaster IP11787p
           protein.
          Length = 446

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 412 FDVGEFRYRSYLTVRIDKRFFVRIES 489
           +  GE  Y SY+  ++DK+++ R+ S
Sbjct: 108 YQAGEVAYYSYIYAKVDKQYYPRVTS 133


>AE014297-1215|AAF54567.2|  446|Drosophila melanogaster CG14694-PA
           protein.
          Length = 446

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 412 FDVGEFRYRSYLTVRIDKRFFVRIES 489
           +  GE  Y SY+  ++DK+++ R+ S
Sbjct: 108 YQAGEVAYYSYIYAKVDKQYYPRVTS 133


>AE014296-1872|AAF50117.3|  410|Drosophila melanogaster CG32079-PA
           protein.
          Length = 410

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 328 SIDSFQCKYTSGVSKIYIVFLADS 399
           S+D   C Y  GV  +Y+VF+A S
Sbjct: 92  SVDILLCAYHFGVDCVYVVFIAKS 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,462,976
Number of Sequences: 53049
Number of extensions: 425242
Number of successful extensions: 803
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)