Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304E08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.6  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   3.8  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   3.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.6  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +1

Query: 145 TSTPAKLSGSQQRSCR--YSTASAVSTCRYLPTSA 243
           +STP+ L   +  +    YS+ S +++C  +PT+A
Sbjct: 78  SSTPSSLPTQRTSTSNPTYSSRSVMTSCSSVPTTA 112


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +3

Query: 321 QPKNQRTAIGKRLKISSLKFINLNLNRTTSNLKYISR 431
           QP+  +   GKR + +      + L R   + KY+SR
Sbjct: 79  QPQRTKPTAGKRARTAYTSAQLVELEREFHHGKYLSR 115


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +3

Query: 321 QPKNQRTAIGKRLKISSLKFINLNLNRTTSNLKYISR 431
           QP+  +   GKR + +      + L R   + KY+SR
Sbjct: 70  QPQRTKPTAGKRARTAYTSAQLVELEREFHHGKYLSR 106


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = -1

Query: 518 PLIELILTXSAGQGKVGPDID*RVAERRQAADILEVAGSSVEVEVD 381
           PL+   +   A  G  GPD+     + +   +   + G  V +EVD
Sbjct: 283 PLVSQRVPQLAKNGAYGPDMIYTPEDVKALVEYARIRGIRVVLEVD 328


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 194 YRQLRCWEPDSLAGVL 147
           Y Q R W P ++A +L
Sbjct: 614 YNQRRRWMPSTMANIL 629


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 194 YRQLRCWEPDSLAGVL 147
           Y Q R W P ++A +L
Sbjct: 847 YNQRRRWMPSTMANIL 862


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 194 YRQLRCWEPDSLAGVL 147
           Y Q R W P ++A +L
Sbjct: 847 YNQRRRWMPSTMANIL 862


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,889
Number of Sequences: 336
Number of extensions: 1501
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)