Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304E08f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 30 1.2
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 30 1.2
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 3.5
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 27 8.1
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 27 8.1
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 27 8.1
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 27 8.1
AL031627-10|CAA20949.1| 301|Caenorhabditis elegans Hypothetical... 27 8.1
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 191 RQLRCWEPDSLAGVLVAAK 135
RQ+R W PDS+ G L+ AK
Sbjct: 417 RQVRMWVPDSMIGALIGAK 435
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 191 RQLRCWEPDSLAGVLVAAK 135
RQ+R W PDS+ G L+ AK
Sbjct: 541 RQVRMWVPDSMIGALIGAK 559
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 52 TSPTKLSGSTTCSSVPTCLPK*LSTTNRFAATSTPAKLSGSQQRSCRYSTASAVST 219
T+ + SG TT S T + LSTT+ + TS P+ SGS + ++ ++ ST
Sbjct: 495 TTKSTTSGPTTSSGPSTVSERTLSTTSGPSTTSGPSTTSGSTVSTTPGASTTSGST 550
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +1
Query: 52 TSPTKLSGSTTCSSVPTCLPK*LSTTNRFAATSTPAKLSGSQQRSCRYSTASAVSTCRYL 231
T P+ +SGST+ S T ST+ A+S+PA S SQ + S+ S++ T
Sbjct: 813 TRPSTVSGSTSSGSTVTVGSTEASTSGSSVASSSPAP-STSQNPNPSTSSGSSMITQSPY 871
Query: 232 PTSA 243
P+ +
Sbjct: 872 PSQS 875
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +1
Query: 52 TSPTKLSGSTTCSSVPTCLPK*LSTTNRFAATSTPAKLSGSQQRSCRYSTASAVST 219
T T S S+T ++ T P STT +++STP+ + S S ST S+ ST
Sbjct: 478 TESTSTSPSSTVTTSTTA-PS-TSTTGPSSSSSTPSSTASSSVSSTASSTQSSTST 531
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 52 TSPTKLSGSTTCSSVPTCLPK*LSTTNRFAATSTPAKLSGSQQRSCRYSTASAVSTCRYL 231
T T +S ST+ S T + +T A+TST + + Q S S+ S+ + +
Sbjct: 302 TVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSI 361
Query: 232 PTS 240
PT+
Sbjct: 362 PTT 364
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +1
Query: 52 TSPTKLSGSTTCSSVPTCLPK*LSTTNRFAATSTPAKLSGSQQRSCRYSTASAVST 219
T T S S+T ++ T P STT +++STP+ + S S ST S+ ST
Sbjct: 478 TESTSTSPSSTVTTSTTA-PS-TSTTGPSSSSSTPSSTASSSVSSTASSTQSSTST 531
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 52 TSPTKLSGSTTCSSVPTCLPK*LSTTNRFAATSTPAKLSGSQQRSCRYSTASAVSTCRYL 231
T T +S ST+ S T + +T A+TST + + Q S S+ S+ + +
Sbjct: 302 TVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSI 361
Query: 232 PTS 240
PT+
Sbjct: 362 PTT 364
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 58 PTKLSGSTTCSS-VPTCLPK*LSTTNRFAATSTPAKLSGSQQRSCRYSTASAVSTCRYLP 234
PT S +T+ ++ VPT STT T P + ++ + Y+T+++ ST LP
Sbjct: 446 PTTTSTTTSATTLVPTTSS---STTTTTTTTPVPVTSTTTEPTTTTYTTSTSTSTTTTLP 502
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical
protein F13B9.1c protein.
Length = 1609
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 5 EVQQNINRNPPLLIGEQAPPN 67
+VQQN N PP+L Q P N
Sbjct: 141 QVQQNFNPTPPVLTTSQKPGN 161
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical
protein F13B9.1b protein.
Length = 1614
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 5 EVQQNINRNPPLLIGEQAPPN 67
+VQQN N PP+L Q P N
Sbjct: 141 QVQQNFNPTPPVLTTSQKPGN 161
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical
protein F13B9.1a protein.
Length = 1632
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 5 EVQQNINRNPPLLIGEQAPPN 67
+VQQN N PP+L Q P N
Sbjct: 141 QVQQNFNPTPPVLTTSQKPGN 161
>AL031627-10|CAA20949.1| 301|Caenorhabditis elegans Hypothetical
protein Y102A5C.19 protein.
Length = 301
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = -1
Query: 140 AKRLVVDNYFGKQVGTELQVVEPDSLVGLVLRSK 39
AK++++D++ ++V LQ EP+ L + L+++
Sbjct: 145 AKKVIIDDFTAREVSEILQKFEPEILEEITLQAQ 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,017,921
Number of Sequences: 27780
Number of extensions: 141591
Number of successful extensions: 510
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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