Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304E06f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E4816E Cluster: PREDICTED: similar to ENSANGP000...    36   0.74 
UniRef50_Q6BK45 Cluster: Similar to CA5234|IPF3014 Candida albic...    34   2.3  
UniRef50_Q8I3N2 Cluster: Putative uncharacterized protein PFE116...    33   3.0  
UniRef50_Q15061 Cluster: WD repeat-containing protein 43; n=33; ...    33   5.2  
UniRef50_Q5LKH1 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  
UniRef50_Q6CGR4 Cluster: Similarity; n=1; Yarrowia lipolytica|Re...    32   9.2  
UniRef50_Q5B386 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_UPI0000E4816E Cluster: PREDICTED: similar to
           ENSANGP00000012923; n=3; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to ENSANGP00000012923
           - Strongylocentrotus purpuratus
          Length = 1085

 Score = 35.5 bits (78), Expect = 0.74
 Identities = 22/100 (22%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
 Frame = +3

Query: 165 TAMTEILRDRSLARCYSKRSSATATSHPLCA--ILTTKINGVN-PPTVLQTTTLRSRLQN 335
           TA+T      +        ++AT T+ P     + TTK++      T++ T + ++R ++
Sbjct: 504 TALTTTQPTTTKPTTRQSSTTATTTTQPTTTKPMTTTKLSTTTVTTTIITTASPKARQRS 563

Query: 336 *RTRRMATSRSLCVSSFLHRMRSWTILQCTVSCSTGCKRN 455
            R + +A  +++  S+ + R  + T+++C   C+  CK +
Sbjct: 564 NRYKIIAQDKTIMDSAVVKRDPTSTLIECAALCTPTCKED 603


>UniRef50_Q6BK45 Cluster: Similar to CA5234|IPF3014 Candida albicans
           IPF3014; n=2; Saccharomycetaceae|Rep: Similar to
           CA5234|IPF3014 Candida albicans IPF3014 - Debaryomyces
           hansenii (Yeast) (Torulaspora hansenii)
          Length = 347

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 215 EEEFSDGDEPPTLCDLNYEDKWRESSDCASDDNSAQSAAELKDSANGNES 364
           +EEF+  DE   + D+  E +  + +  A DDNS Q ++   D  N  E+
Sbjct: 287 DEEFTWDDEEEDVVDVAKEAQGEQDAKSAKDDNSVQESSRDSDEKNNKEN 336


>UniRef50_Q8I3N2 Cluster: Putative uncharacterized protein PFE1160w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFE1160w - Plasmodium falciparum
           (isolate 3D7)
          Length = 1101

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 20/98 (20%), Positives = 44/98 (44%)
 Frame = +2

Query: 218 EEFSDGDEPPTLCDLNYEDKWRESSDCASDDNSAQSAAELKDSANGNESLTLREFLSSPN 397
           ++FS G     L   +Y  K +   +  S+ N  ++  ++  + N N+++     +++ N
Sbjct: 328 DDFSCGQLVNILLSYSYFFKKQPEGNKKSNTNQKKNEKDIHKNDNKNDNINNNNIINNNN 387

Query: 398 AELDYPTVHSLMFHWLQT*HLNVTTISLQVLFRYCLIN 511
              DY   +  M ++ +   +    I L  +F  CL+N
Sbjct: 388 NNYDYMIDNKPMLYFFKGNTIQSDDILLHNIFNKCLLN 425


>UniRef50_Q15061 Cluster: WD repeat-containing protein 43; n=33;
           Euteleostomi|Rep: WD repeat-containing protein 43 - Homo
           sapiens (Human)
          Length = 677

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
 Frame = +2

Query: 206 LLLEEEFSDGDEPPTLCDLNYEDKW---RESSDCASDDN--SAQSAAELKDSANGNESLT 370
           L+ EEE S+ +    + D + ED W    E S+   D++       AE KD  NG +  T
Sbjct: 597 LVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDT 656

Query: 371 LREFLSSPNAELD 409
             E   + +++LD
Sbjct: 657 ASEKELNGDSDLD 669


>UniRef50_Q5LKH1 Cluster: Putative uncharacterized protein; n=1;
           Silicibacter pomeroyi|Rep: Putative uncharacterized
           protein - Silicibacter pomeroyi
          Length = 642

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 221 EFSDGDEPPTLCDLNYEDKWRESSDCASDDNSAQSAAELKDSAN-GNES 364
           EF +GDE  T  D N++D++ E  D    +       +  D  N GNE+
Sbjct: 159 EFDEGDEDSTYWDFNFDDEYDEGIDANMHEADEGDEGDEGDENNEGNEN 207


>UniRef50_Q6CGR4 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
           Similarity - Yarrowia lipolytica (Candida lipolytica)
          Length = 181

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 189 DRSLARCYSKRSSATATSHPLCAILTTKINGVNPPTV--LQTTTLRSRL 329
           +R  +RCY  RSSA   S   CA L  +    +P      QT+T++ RL
Sbjct: 31  ERHCSRCYVSRSSAREQSVSKCASLYKRARNAHPEPARYTQTSTMKLRL 79


>UniRef50_Q5B386 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 715

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +2

Query: 383 LSSPNAELDYPTVHSLMFHWLQT*HLNVTTISLQVLFRYCLINSS 517
           L SP+AELD  T   L  +  Q  H N+     +VL+RY  +N S
Sbjct: 523 LDSPHAELDKETYEQLFVNAFQNKHFNI----CRVLWRYACMNES 563


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 422,107,519
Number of Sequences: 1657284
Number of extensions: 6875113
Number of successful extensions: 22381
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22358
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)