Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304E06f
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 23 1.2
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 23 1.2
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 23 1.2
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 6.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 6.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 6.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 6.6
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 21 6.6
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 6.6
DQ855494-1|ABH88181.1| 99|Tribolium castaneum chemosensory pro... 21 8.7
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 8.7
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 8.7
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 23.4 bits (48), Expect = 1.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 394 ECGAGLSYSAQSHVPLVANVTSECHYDLTTG 486
+C GL+Y ++ V + A+ EC + G
Sbjct: 123 QCSPGLAYDREARVCMWADQVPECKNEEVAG 153
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 23.4 bits (48), Expect = 1.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 394 ECGAGLSYSAQSHVPLVANVTSECHYDLTTG 486
+C GL+Y ++ V + A+ EC + G
Sbjct: 123 QCSPGLAYDREARVCMWADQVPECKNEEVAG 153
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 23.4 bits (48), Expect = 1.2
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = -3
Query: 492 NSTCSEIVVTFRCYVCNQWNMRLCTV 415
N +C + + F C N W + C++
Sbjct: 118 NGSCVDRIADFECNCKNGWKGKTCSL 143
Score = 21.4 bits (43), Expect = 5.0
Identities = 7/24 (29%), Positives = 11/24 (45%)
Frame = -3
Query: 486 TCSEIVVTFRCYVCNQWNMRLCTV 415
TC + + F+C W LC +
Sbjct: 82 TCVDKINAFQCICKEGWEGALCNI 105
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.6
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +1
Query: 16 EVLFWKECLEE 48
E+LFWK+ L++
Sbjct: 1232 EILFWKDLLDK 1242
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.6
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +1
Query: 16 EVLFWKECLEE 48
E+LFWK+ L++
Sbjct: 1232 EILFWKDLLDK 1242
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.6
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +1
Query: 16 EVLFWKECLEE 48
E+LFWK+ L++
Sbjct: 1232 EILFWKDLLDK 1242
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.6
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +1
Query: 16 EVLFWKECLEE 48
E+LFWK+ L++
Sbjct: 1232 EILFWKDLLDK 1242
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 21.0 bits (42), Expect = 6.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -1
Query: 410 SPAPHSVKKGTHAE*ATRCHSPSP 339
SP PH H + AT +P P
Sbjct: 279 SPPPHVYNPPDHIQQATPYSAPGP 302
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.0 bits (42), Expect = 6.6
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -3
Query: 510 LIKQYRNSTCSEIVVTFRCYVCNQWNMRLC 421
L K N TC +I + RC+ + ++ C
Sbjct: 152 LKKLCNNGTCEDIGNSHRCHCSDGYSGSYC 181
>DQ855494-1|ABH88181.1| 99|Tribolium castaneum chemosensory
protein 8 protein.
Length = 99
Score = 20.6 bits (41), Expect = 8.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 48 RHPKSWNGLMK 80
+HP WN L+K
Sbjct: 85 KHPDVWNALVK 95
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 20.6 bits (41), Expect = 8.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 269 EDKWRESSDCASDDNSAQSAAELK 340
EDK +D SA++ AELK
Sbjct: 383 EDKGMYQCFIRNDQESAEATAELK 406
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 20.6 bits (41), Expect = 8.7
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -1
Query: 176 RHCCPDCRSRFVVARSLA 123
R CP C RF+ + LA
Sbjct: 374 RFACPICNKRFMRSDHLA 391
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,906
Number of Sequences: 336
Number of extensions: 1663
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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