Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304E05f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   1.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   2.9  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   2.9  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    22   3.8  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   8.7  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 267 DHLLIKSRVEESDFGSNSF 211
           +HLLI+  +  S FGS+SF
Sbjct: 44  EHLLIQCYIAVSIFGSSSF 62


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 373 LLLDVSPTKFVFLAQTPFVKVIDLEGTVDV 462
           + L +  T F FLA+   +K  D+   VDV
Sbjct: 99  MALTLIVTLFTFLARGTLIKSFDMLSHVDV 128


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 373 LLLDVSPTKFVFLAQTPFVKVIDLEGTVDV 462
           + L +  T F FLA+   +K  D+   VDV
Sbjct: 99  MALTLIVTLFTFLARGTLIKSFDMLSHVDV 128


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 142 DKKKQGHKTSVRYL 183
           DK+KQG KT +++L
Sbjct: 79  DKQKQGAKTVIQHL 92


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 169 RSCVPVSSYPGR 134
           R C   SS+PGR
Sbjct: 29  RDCTTASSWPGR 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.133    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,935
Number of Sequences: 336
Number of extensions: 2866
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)