Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304E04f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   2.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   2.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   2.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   3.8  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   5.0  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   8.7  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 461 ISAMRLXKICTGISDPYLY 517
           I A RL   C+G++  YLY
Sbjct: 101 IEANRLFFYCSGLASGYLY 119


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 461 ISAMRLXKICTGISDPYLY 517
           I A RL   C+G++  YLY
Sbjct: 101 IEANRLFFYCSGLASGYLY 119


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 461 ISAMRLXKICTGISDPYLY 517
           I A RL   C+G++  YLY
Sbjct: 101 IEANRLFFYCSGLASGYLY 119


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +2

Query: 368 YXQGPASSSYAISIILQPRGLISAFWV*T*EISAMRLXKICTGISD 505
           Y +  A   YAI +IL  R L+S     + + +A  L  I   +SD
Sbjct: 178 YTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPIIHNLLSD 223


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 148 RIIFADNTNLNLRGLEVDRQHLRQTRDGKLNRIIGAE 258
           ++I  D   LNL   E     + +T DG+LN  I A+
Sbjct: 133 KLIDPDLKELNLDTKESYALTVAETADGRLNATIIAD 169


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 402 IAYDDEAGPCXYKTDPSGYYCSYKAV 325
           + Y+D+AG C +  +     CS + V
Sbjct: 142 LVYNDKAGICSWPDEAKKKGCSSEEV 167


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,340
Number of Sequences: 336
Number of extensions: 1669
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)