Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304E02f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 151 9e-36
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 149 4e-35
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 147 2e-34
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 126 4e-28
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 121 1e-26
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 121 1e-26
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 120 2e-26
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 118 6e-26
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 116 2e-25
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 115 6e-25
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 108 9e-23
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 103 2e-21
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 103 2e-21
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 103 2e-21
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 99 7e-20
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 96 4e-19
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 95 7e-19
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 95 9e-19
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 95 9e-19
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 94 2e-18
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 91 1e-17
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 90 3e-17
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 89 6e-17
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 85 9e-16
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 84 2e-15
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 84 2e-15
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 84 2e-15
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 84 2e-15
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 83 3e-15
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 79 5e-14
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 79 8e-14
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 75 8e-13
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 69 5e-11
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 67 2e-10
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 66 6e-10
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 65 1e-09
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 62 6e-09
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 62 7e-09
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 59 7e-08
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 58 2e-07
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 56 4e-07
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 54 3e-06
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 52 1e-05
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 50 3e-05
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 50 3e-05
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 48 1e-04
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 48 1e-04
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 47 3e-04
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 46 7e-04
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 45 0.001
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 45 0.001
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 44 0.002
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 44 0.003
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 42 0.009
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 41 0.020
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 41 0.020
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 41 0.020
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 40 0.046
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 39 0.060
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 38 0.11
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 38 0.11
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 38 0.14
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 38 0.18
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 37 0.32
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 36 0.74
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 35 0.98
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 35 0.98
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 35 0.98
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 34 2.3
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 33 4.0
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 33 5.2
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 33 5.2
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 151 bits (366), Expect = 9e-36
Identities = 79/139 (56%), Positives = 92/139 (66%)
Frame = -2
Query: 418 DEIPAKCSEKIARSTDLPLCAILDESGGXTVHPVXAPFSTILLEINNIREGGRSQNLILF 239
+E PAKC+EKI STD P CAI SGG TVHPV P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 238 IXGNXIXGAXSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SSPINDPGFPNSAR 59
I GN + GA ++ GTNQFPNPP KA AVT+ L I S PI PG PNSAR
Sbjct: 138 IRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSFPIKLPGCPNSAR 196
Query: 58 IKSLKDVPIIPDQIPKIKY 2
IKSL DVP +P PK+KY
Sbjct: 197 IKSLSDVPTMPAHAPKMKY 215
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 149 bits (361), Expect = 4e-35
Identities = 84/153 (54%), Positives = 89/153 (58%)
Frame = +3
Query: 63 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXIN 242
AELG PGSLIGDDQIYNTIVTAHA N LVPL+L AP + FP +N
Sbjct: 36 AELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMN 95
Query: 243 NIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 422
N+ F IVENGA TG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 96 NMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSI 155
Query: 423 XXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
S DQ+PLF AVGIT
Sbjct: 156 LGAINFITTIINMRMNNLSFDQMPLFVWAVGIT 188
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 147 bits (356), Expect = 2e-34
Identities = 82/152 (53%), Positives = 88/152 (57%)
Frame = +3
Query: 66 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINN 245
ELG PGSLIGDDQIYNTIVTAHA N L+PL+L AP + FP +NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 246 IRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 425
+ F IVENGA TG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSIL 132
Query: 426 XXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
S DQ+PLF AVGIT
Sbjct: 133 GAINFITTIINMRINKMSFDQMPLFIWAVGIT 164
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 126 bits (303), Expect = 4e-28
Identities = 73/153 (47%), Positives = 83/153 (54%)
Frame = +3
Query: 63 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXIN 242
AELG PG+L+GDDQIYN IVTAHA N LVPL++ AP + FP +N
Sbjct: 40 AELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 243 NIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 422
N+ F VE GA TG TVYPPL+ N+AH G SVDLAIFSLHLAGISS
Sbjct: 100 NMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSI 159
Query: 423 XXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
S Q PLF +V IT
Sbjct: 160 LGAINFITTAINMKPPAISQYQTPLFVWSVLIT 192
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 121 bits (291), Expect = 1e-26
Identities = 69/153 (45%), Positives = 80/153 (52%)
Frame = +3
Query: 63 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXIN 242
AEL PG+L+GDDQIYN IVTAHA N L+PL++ AP + FP +N
Sbjct: 28 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMN 87
Query: 243 NIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 422
N+ F +E GA TG TVYPPL+ N+AH G SVDL IFSLHLAGISS
Sbjct: 88 NMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSI 147
Query: 423 XXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
S Q PLF AV IT
Sbjct: 148 LGAINFITTIMNMKPPAISQYQTPLFVWAVLIT 180
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 121 bits (291), Expect = 1e-26
Identities = 69/153 (45%), Positives = 80/153 (52%)
Frame = +3
Query: 63 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXIN 242
AEL PG+L+GDDQIYN IVTAHA N LVPL++ AP + FP +N
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 243 NIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 422
N+ F VE GA TG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 99 NMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSI 158
Query: 423 XXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
S Q PLF AV +T
Sbjct: 159 LGAINFITTTINMKPPTISQYQTPLFVWAVLVT 191
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 120 bits (289), Expect = 2e-26
Identities = 62/118 (52%), Positives = 71/118 (60%)
Frame = +3
Query: 66 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINN 245
ELG PGS IG+DQ+YN +VTAHA N LVPL+L AP + FP +NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 246 IRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
+ F VE+GA TG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSS 140
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 118 bits (285), Expect = 6e-26
Identities = 67/153 (43%), Positives = 80/153 (52%)
Frame = +3
Query: 63 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXIN 242
AEL PG+L+GDDQIYN IVTAHA N LVPL++ AP + FP +N
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 243 NIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 422
N+ F VE GA TG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 99 NMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSI 158
Query: 423 XXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+ Q PLF +V +T
Sbjct: 159 LGAINFITTIINMKPPAITQYQTPLFVWSVLVT 191
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 116 bits (280), Expect = 2e-25
Identities = 66/153 (43%), Positives = 80/153 (52%)
Frame = +3
Query: 63 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXIN 242
AELG PG+L+G+D IYN IVTAHA N LVPL++ AP + FP +N
Sbjct: 39 AELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 243 NIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 422
N+ F +VE GA TG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 99 NMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSI 158
Query: 423 XXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+ Q PLF +V IT
Sbjct: 159 LGAINFITTIINMKPPAMTQYQTPLFVWSVLIT 191
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 115 bits (277), Expect = 6e-25
Identities = 64/152 (42%), Positives = 80/152 (52%)
Frame = +3
Query: 66 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINN 245
EL +PGS++GDD +YN IVTAHA N VPL++ AP + FP +NN
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 246 IRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 425
I F +VE GA TG TVYPPL+S AH G SVD+AIFSLHLAG+SS
Sbjct: 101 ISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSIL 160
Query: 426 XXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+ ++PLF +V IT
Sbjct: 161 GAMNFITTVMNMRTPGMTMSRIPLFVWSVLIT 192
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 108 bits (259), Expect = 9e-23
Identities = 62/152 (40%), Positives = 77/152 (50%)
Frame = +3
Query: 66 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINN 245
ELG PGSLIG+DQIYN+IVT+HA N L+PL+L +P + FP +NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 246 IRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 425
+ F + G TG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIM 143
Query: 426 XXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+ D++ LF +V IT
Sbjct: 144 GAVNFITTILNMRSNLFNMDKMSLFSWSVFIT 175
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 103 bits (248), Expect = 2e-21
Identities = 63/154 (40%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Frame = +3
Query: 66 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXI 239
EL PG L GD Q+YN I+TAHA N LVP+++ AP + FP +
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 240 NNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
NNI F VE GA TG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 98 NNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
Query: 420 XXXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+ +LPLF A+ +T
Sbjct: 158 MLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVT 191
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 103 bits (248), Expect = 2e-21
Identities = 63/154 (40%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Frame = +3
Query: 66 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXI 239
EL PG L GD Q+YN I+TAHA N LVP+++ AP + FP +
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 240 NNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
NNI F VE GA TG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 98 NNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
Query: 420 XXXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+ +LPLF A+ +T
Sbjct: 158 MLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVT 191
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 103 bits (248), Expect = 2e-21
Identities = 63/154 (40%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Frame = +3
Query: 66 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXI 239
EL PG L GD Q+YN I+TAHA N LVP+++ AP + FP +
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 240 NNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
NNI F VE GA TG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 98 NNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
Query: 420 XXXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+ +LPLF A+ +T
Sbjct: 158 MLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVT 191
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 98.7 bits (235), Expect = 7e-20
Identities = 57/154 (37%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Frame = +3
Query: 66 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXI 239
EL PG I G+ Q+YN ++TAHA N VP+++ AP + FP +
Sbjct: 41 ELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRL 100
Query: 240 NNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
NNI F +VE G+ TG TVYPPLS +H G +VDLAIFSLHL+G+SS
Sbjct: 101 NNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSS 160
Query: 420 XXXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+ +LPLF +V +T
Sbjct: 161 ILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVT 194
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 96.3 bits (229), Expect = 4e-19
Identities = 56/154 (36%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Frame = +3
Query: 66 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXI 239
EL P + L+G+ QIYN ++TAHA N LVP+++ +P + FP +
Sbjct: 46 ELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRL 105
Query: 240 NNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
NNI F +VE G TG TVYPPLSS +H G +VDLAIFSLH++G SS
Sbjct: 106 NNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASS 165
Query: 420 XXXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
S ++PLF ++ +T
Sbjct: 166 ILGAVNFISTILNMRSPGQSMYRIPLFVWSILVT 199
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 95.5 bits (227), Expect = 7e-19
Identities = 60/154 (38%), Positives = 75/154 (48%), Gaps = 2/154 (1%)
Frame = +3
Query: 66 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXI 239
EL PGS L G+ Q++N +V HA N ++PL++ A + FP I
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 240 NNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
N+I F +VE+GA TG TVYPPLSS AH G SVDLAIFSLHL ISS
Sbjct: 99 NSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISS 158
Query: 420 XXXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
S ++PLF A+ IT
Sbjct: 159 LLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFIT 192
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 95.1 bits (226), Expect = 9e-19
Identities = 60/154 (38%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Frame = +3
Query: 66 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXI 239
EL PGS L G+ Q++N +V HA N L+PL++ A FP I
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 240 NNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
NNI F +VE+GA TG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 99 NNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISS 158
Query: 420 XXXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+ +LPLF ++ IT
Sbjct: 159 LLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFIT 192
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 95.1 bits (226), Expect = 9e-19
Identities = 60/154 (38%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Frame = +3
Query: 66 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXI 239
EL PGS L G+ Q++N +V HA N L+PL++ A FP I
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 240 NNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
NNI F +VE+GA TG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 99 NNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISS 158
Query: 420 XXXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+ +LPLF ++ IT
Sbjct: 159 LLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFIT 192
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 94.3 bits (224), Expect = 2e-18
Identities = 52/119 (43%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = +3
Query: 66 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXIN 242
EL PG I D+Q+YN+I+TAHA N L+PL L P + FP +N
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLN 99
Query: 243 NIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
NI + +ENG TG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 100 NISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISS 158
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 91.5 bits (217), Expect = 1e-17
Identities = 57/154 (37%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Frame = +3
Query: 66 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXI 239
EL PG L G++Q++N +V HA N ++PL++ A FP I
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
Query: 240 NNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
NNI F +VE+GA TG TVYPPL+S AH G SVDLAIF+LH+ ISS
Sbjct: 99 NNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISS 158
Query: 420 XXXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+ +LPLF A+ IT
Sbjct: 159 LLGAINFIVTTLNMRTNGMTMHKLPLFVWAILIT 192
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 89.8 bits (213), Expect = 3e-17
Identities = 52/153 (33%), Positives = 70/153 (45%), Gaps = 1/153 (0%)
Frame = +3
Query: 66 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXIN 242
EL PG I D+Q+YN+I+T+H N L+P+++ P + FP +N
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 243 NIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 422
N+ + I+ENG TG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 126 NVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSL 185
Query: 423 XXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+L LF AV IT
Sbjct: 186 LGAINFIATLLNMRSPGIKLHKLALFGWAVVIT 218
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 89.0 bits (211), Expect = 6e-17
Identities = 50/123 (40%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Frame = +3
Query: 66 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXIN 242
EL PG I ++Q+YN+I+TAHA N L+PL++ P + FP +N
Sbjct: 68 ELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMAFPRLN 127
Query: 243 NIRFXXXXXXXXXXXXXXIVENGAXTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAG 410
NI F I+E G TG T+ YPPLS +H G SVDLAIF+LHL+G
Sbjct: 128 NISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSG 187
Query: 411 ISS 419
+SS
Sbjct: 188 VSS 190
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 85.0 bits (201), Expect = 9e-16
Identities = 56/154 (36%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Frame = +3
Query: 66 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXI 239
EL N GS L G+ Q +N ++TAHA N L+PL+L A + F +
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 240 NNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
NNI F +VE GA TG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 104 NNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSS 163
Query: 420 XXXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+ +PLF AV T
Sbjct: 164 LLGAINFITTFINMRTIGMKYENVPLFAWAVLFT 197
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 84.2 bits (199), Expect = 2e-15
Identities = 48/149 (32%), Positives = 71/149 (47%)
Frame = +3
Query: 75 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINNIRF 254
NP L+ + Q++N ++TAHA N LVPL + + FP INN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 255 XXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 434
+++ G +G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 435 XXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+LPLF +V IT
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLIT 209
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 84.2 bits (199), Expect = 2e-15
Identities = 48/149 (32%), Positives = 71/149 (47%)
Frame = +3
Query: 75 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINNIRF 254
NP L+ + Q++N ++TAHA N LVPL + + FP INN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 255 XXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 434
+++ G +G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 435 XXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+LPLF +V IT
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLIT 209
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 84.2 bits (199), Expect = 2e-15
Identities = 48/149 (32%), Positives = 71/149 (47%)
Frame = +3
Query: 75 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINNIRF 254
NP L+ + Q++N ++TAHA N LVPL + + FP INN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 255 XXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 434
+++ G +G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 435 XXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+LPLF +V IT
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLIT 209
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 84.2 bits (199), Expect = 2e-15
Identities = 48/149 (32%), Positives = 71/149 (47%)
Frame = +3
Query: 75 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINNIRF 254
NP L+ + Q++N ++TAHA N LVPL + + FP INN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 255 XXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 434
+++ G +G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 435 XXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+LPLF +V IT
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLIT 209
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 83.4 bits (197), Expect = 3e-15
Identities = 53/154 (34%), Positives = 62/154 (40%), Gaps = 2/154 (1%)
Frame = +3
Query: 66 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXI 239
EL PG L G+ YN I T H N VP+++ AP + FP +
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 240 NNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
NN F E G TG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 102 NNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
Query: 420 XXXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
LPLF +V +T
Sbjct: 162 IVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVT 195
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 79.4 bits (187), Expect = 5e-14
Identities = 47/118 (39%), Positives = 57/118 (48%)
Frame = +3
Query: 66 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINN 245
ELG PGSL+ DDQ+YN +VTAH N LVPL+L AP + FP +NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 246 IRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
+ F + G + PL G SVDLAIF LHLAG+SS
Sbjct: 84 MSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 78.6 bits (185), Expect = 8e-14
Identities = 44/95 (46%), Positives = 52/95 (54%)
Frame = +3
Query: 63 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXIN 242
AELG PG+L+GDDQ N IVTAHA N LVPL++ AP + FP +N
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 243 NIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLS 347
N+ F VE GA TG TVYPPL+
Sbjct: 100 NMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 75.4 bits (177), Expect = 8e-13
Identities = 48/107 (44%), Positives = 55/107 (51%)
Frame = +3
Query: 201 LILXAPXIXFPXINNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVD 380
L L AP FP N+ F VE GA TG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 381 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
LAIFSLH+AG+ S + ++PLF AV IT
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEIT 110
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 69.3 bits (162), Expect = 5e-11
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Frame = +3
Query: 63 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPX 236
A LG L G D ++N ++T H N +PL++ AP + FP
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 237 INNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 416
+NN+ + +++ GA G T YPP+S+ R+VD AIF++H++G S
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGAS 262
Query: 417 SXXXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
S + ++PLF +V +T
Sbjct: 263 SILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVT 297
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 67.3 bits (157), Expect = 2e-10
Identities = 34/65 (52%), Positives = 40/65 (61%)
Frame = +3
Query: 201 LILXAPXIXFPXINNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVD 380
L+L AP + FP +NN+ F +VENGA TG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 381 LAIFS 395
LAI+S
Sbjct: 61 LAIYS 65
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 65.7 bits (153), Expect = 6e-10
Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Frame = +3
Query: 105 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINNIRFXXXXXXXXXX 284
++N ++TAH N VP+++ AP + FP +NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152
Query: 285 XXXXIVE----NGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 452
V NGA TG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 153 LGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTI 211
Query: 453 XXXXXXXXSXDQLPLFX*AVGIT 521
+ ++PLF +V +T
Sbjct: 212 LNMRAPGMTLHKMPLFVWSVLVT 234
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 64.9 bits (151), Expect = 1e-09
Identities = 35/118 (29%), Positives = 55/118 (46%)
Frame = +3
Query: 66 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINN 245
EL +PG + +Y++I+T HA N +PL++ + P +NN
Sbjct: 42 ELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNN 101
Query: 246 IRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
+ + G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 102 LSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 62.5 bits (145), Expect = 6e-09
Identities = 33/113 (29%), Positives = 48/113 (42%)
Frame = +3
Query: 81 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINNIRFXX 260
G L GD Q YN ++T+H N +P++ P + FP +NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 261 XXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
+ E G G T+YP L H + D +F++HL GISS
Sbjct: 108 YLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISS 160
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 62.1 bits (144), Expect = 7e-09
Identities = 44/117 (37%), Positives = 52/117 (44%)
Frame = +3
Query: 69 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINNI 248
L G +IG QI VTA A L PL + AP + P + N+
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 249 RFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
F + G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 91 SFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 58.8 bits (136), Expect = 7e-08
Identities = 38/99 (38%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Frame = +3
Query: 66 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXI 239
EL PG L GD Q+YN I+TAHA N LVP+++ AP + FP +
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 240 NNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNI 356
NNI F VE GA TG TV LS I
Sbjct: 98 NNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 57.6 bits (133), Expect = 2e-07
Identities = 38/147 (25%), Positives = 55/147 (37%), Gaps = 2/147 (1%)
Frame = +3
Query: 66 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXI 239
EL +PG G Q+YN+++T H N ++PL+L AP + FP +
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 240 NNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
N + F + G + T YPPLS S+D I LH GI S
Sbjct: 109 NALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGS 167
Query: 420 XXXXXXXXXXXXXXXXXXXSXDQLPLF 500
+ DQ+ +F
Sbjct: 168 LLGAINFMVTTQNMRSTAVTLDQISMF 194
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 56.4 bits (130), Expect = 4e-07
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = +3
Query: 297 IVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
+VE G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 53.6 bits (123), Expect = 3e-06
Identities = 29/61 (47%), Positives = 36/61 (59%)
Frame = +3
Query: 339 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGI 518
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 519 T 521
T
Sbjct: 132 T 132
Score = 37.5 bits (83), Expect = 0.18
Identities = 19/42 (45%), Positives = 20/42 (47%)
Frame = +2
Query: 173 WRIWKLIXXXXXXXXXXXIPTNK*YKILTPTPLPYIINFKKN 298
W IWKLI P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 51.6 bits (118), Expect = 1e-05
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +3
Query: 66 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXI 239
EL PG+ I G+ Q+YN ++TAHA N VP+++ +P + FP +
Sbjct: 42 ELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRL 101
Query: 240 NNIRFXXXXXXXXXXXXXXIVENGAXTG*TV 332
NNI F +VE G +G TV
Sbjct: 102 NNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 50.0 bits (114), Expect = 3e-05
Identities = 34/99 (34%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +3
Query: 66 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXI 239
EL N GS L G+ Q +N ++TAHA N L+PL+L A + F +
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 240 NNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNI 356
NNI F +VE GA TG TV SS +
Sbjct: 104 NNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 50.0 bits (114), Expect = 3e-05
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +3
Query: 105 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINNIRFXXXXXXXXXX 284
+YN I T H N +P++ +P + +P IN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLV 117
Query: 285 XXXXIVENGAXTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 419
E G TG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 118 ILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 48.4 bits (110), Expect = 1e-04
Identities = 30/106 (28%), Positives = 47/106 (44%)
Frame = +3
Query: 102 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINNIRFXXXXXXXXX 281
+IYN + T H N L P++L + +P +N
Sbjct: 60 EIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVL 119
Query: 282 XXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
+E G+ TG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 120 VVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 48.0 bits (109), Expect = 1e-04
Identities = 37/118 (31%), Positives = 50/118 (42%)
Frame = +3
Query: 66 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINN 245
+L P L D +YN VT H N L+P P + FP +N
Sbjct: 37 QLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNA 94
Query: 246 IRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
+ F ++ + A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 95 LSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 46.8 bits (106), Expect = 3e-04
Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Frame = +3
Query: 66 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINN 245
EL +PG + + YN+++T+H N L+PL++ A + FP IN
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 246 IRF--XXXXXXXXXXXXXXIVE-NGAXTG*TVYPPLS-----SNIAHRGRSVDLAIFSLH 401
I F I E A TG T+Y PLS N A+ G VDL + LH
Sbjct: 181 IAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGEGMGNQANAG--VDLMLLGLH 238
Query: 402 LAGISS 419
L+G+S+
Sbjct: 239 LSGVSA 244
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 45.6 bits (103), Expect = 7e-04
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +3
Query: 66 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXI 239
EL PG+ L G+ Q++N +V HA N L+PL++ A + F +
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 240 NNIRFXXXXXXXXXXXXXXIVENGAXTG*TV 332
NNI F +VE+GA TG TV
Sbjct: 99 NNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 45.2 bits (102), Expect = 0.001
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Frame = +3
Query: 105 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINNIRFXXXXXXXXXX 284
IYN +T H N L+P+++ + P +N I F
Sbjct: 63 IYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIF 122
Query: 285 XXXXIV-ENGAXTG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 419
++ +G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 123 VISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 44.8 bits (101), Expect = 0.001
Identities = 31/119 (26%), Positives = 45/119 (37%)
Frame = +3
Query: 63 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXIN 242
A+L P + D YN I T H N +VPL + A + FP +N
Sbjct: 80 AQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLN 138
Query: 243 NIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
N+ F ++ G T Y PL+SN G + + L +AGI +
Sbjct: 139 NLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAGIGT 197
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 44.0 bits (99), Expect = 0.002
Identities = 31/114 (27%), Positives = 45/114 (39%)
Frame = +3
Query: 78 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINNIRFX 257
PG + D + YN ++T H N L+PL++ A + FP +N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 258 XXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASS 113
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 43.6 bits (98), Expect = 0.003
Identities = 32/116 (27%), Positives = 45/116 (38%)
Frame = +3
Query: 66 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINN 245
EL PG I D YN + T H N L+P+++ A + FP +N
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 246 IRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 413
+ F +V+ GA TG T Y P S+ + V L F L + I
Sbjct: 123 LSF-YVYLAGAVVALFGMVQGGADTGWTFYTPYSTTTITKVVPVLLGAFILGFSSI 177
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 41.9 bits (94), Expect = 0.009
Identities = 30/105 (28%), Positives = 41/105 (39%)
Frame = +3
Query: 105 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINNIRFXXXXXXXXXX 284
+YN +VT H N +P+ L + P +N++
Sbjct: 151 VYNYLVTNHGVAMIFFFLMPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYM 210
Query: 285 XXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 211 ELSLYY--GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 40.7 bits (91), Expect = 0.020
Identities = 37/152 (24%), Positives = 52/152 (34%)
Frame = +3
Query: 66 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINN 245
EL PG I D YN T H N ++PL+L A + FP +N
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNL 129
Query: 246 IRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 425
+ ++ G TG T Y P S AH +V +F + G SS
Sbjct: 130 LSL-YIYLAGAVLALWGMLNGGLDTGWTFYTPYS---AHTTTTVAPVLFGAFIIGFSSIV 185
Query: 426 XXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
+ ++PLF A+ T
Sbjct: 186 TGINFIVTCHTMRAPGITWFKMPLFVWAIYAT 217
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 40.7 bits (91), Expect = 0.020
Identities = 27/105 (25%), Positives = 39/105 (37%), Gaps = 1/105 (0%)
Frame = +3
Query: 108 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINNIRFXXXXXXXXXXX 287
Y I T H N L+PL++ A + FP +N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 288 XXXIVENG-AXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
G A G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 40.7 bits (91), Expect = 0.020
Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 2/120 (1%)
Frame = +3
Query: 66 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINN 245
EL + +YN ++T+H N +PL++ A + FP IN
Sbjct: 96 ELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRINA 154
Query: 246 IRFXXXXXXXXXXXXXXIVEN--GAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
I F ++ A T T+Y PLS ++ +VD+ + LHL G+S+
Sbjct: 155 IAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--SPAVDMMMLGLHLTGVSA 212
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 39.5 bits (88), Expect = 0.046
Identities = 32/120 (26%), Positives = 45/120 (37%), Gaps = 1/120 (0%)
Frame = +3
Query: 63 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXIN 242
AEL PG ++ +N + T H N ++PL + AP + FP +N
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLN 123
Query: 243 NIRFXXXXXXXXXXXXXXIVENGAXT-G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
F + GA G T+Y PLS I G D+ I + GI S
Sbjct: 124 AFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHSPGLGSDMWIVGVGATGIGS 183
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 39.1 bits (87), Expect = 0.060
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +3
Query: 186 N*LVPLILXAPXIXFPXINNIRFXXXXXXXXXXXXXXIV-ENGAXTG*TVYPPLSSNIAH 362
N LVP ++ AP + +P IN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 363 RGRSVDLAIFSLHLAGISS 419
+ VDL + + +AG SS
Sbjct: 144 KSIGVDLILLGIIIAGFSS 162
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 38.3 bits (85), Expect = 0.11
Identities = 24/78 (30%), Positives = 36/78 (46%)
Frame = +3
Query: 186 N*LVPLILXAPXIXFPXINNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHR 365
N +VPL + A + FP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 366 GRSVDLAIFSLHLAGISS 419
VD I++L ++GI +
Sbjct: 185 DVGVDYYIWALQISGIGT 202
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 38.3 bits (85), Expect = 0.11
Identities = 24/78 (30%), Positives = 35/78 (44%)
Frame = +3
Query: 186 N*LVPLILXAPXIXFPXINNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHR 365
N VPL + A + FP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 366 GRSVDLAIFSLHLAGISS 419
G VD I++L L+G+ +
Sbjct: 184 GVGVDYYIWALQLSGLGT 201
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 37.9 bits (84), Expect = 0.14
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 4/110 (3%)
Frame = +3
Query: 102 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINNIRFXXXXXXXXX 281
+ Y +VT HA N L+PL++ A + FP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 282 XXXXXIVE-NGAXTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISS 419
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSS 195
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 37.5 bits (83), Expect = 0.18
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 186 N*LVPLILXAPXIXFPXINNIRFXXXXXXXXXXXXXXIVENGAXT-G*TVYPPLSSNIAH 362
N +VPL + A + FP +N + + E+GA G T+Y PL++ I
Sbjct: 88 NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYT 147
Query: 363 RGRSVDLAIFSLHLAGIS 416
G +DLA ++ L +S
Sbjct: 148 PGIGLDLAALAIFLFSLS 165
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 36.7 bits (81), Expect = 0.32
Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 3/121 (2%)
Frame = +3
Query: 66 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINN 245
EL P + + D +YN + T H N L+P ++ AP + FP +N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 246 IRFXXXXXXXXXXXXXXIVENG-AXTG*TVYPPLS--SNIAHRGRSVDLAIFSLHLAGIS 416
F G A +G YPP+S + + H L I ++ L+GIS
Sbjct: 123 AAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEFLWILAVALSGIS 182
Query: 417 S 419
S
Sbjct: 183 S 183
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 35.5 bits (78), Expect = 0.74
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +3
Query: 186 N*LVPLILXAPXIXFPXINNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHR 365
N +VPL + A + FP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 366 GRSVDLAIFSLHLAGISS 419
G VD I+SL LA + S
Sbjct: 204 GIGVDYWIWSLTLASLGS 221
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 35.1 bits (77), Expect = 0.98
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +3
Query: 186 N*LVPLILXAPXIXFPXINNIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHR 365
N ++PL + + + FP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 366 GRSVDLAIFSLHLAGISS 419
VD +S+ ++GI +
Sbjct: 179 WVGVDYWNWSIQISGIGT 196
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 35.1 bits (77), Expect = 0.98
Identities = 31/145 (21%), Positives = 48/145 (33%)
Frame = +3
Query: 66 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINN 245
+L P + +++N + T H N VPL++ A + FP +N+
Sbjct: 60 QLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNS 118
Query: 246 IRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 425
F + + G Y PLSS + VD I L + GI S
Sbjct: 119 FGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVDYWIIGLLIMGIGSVS 178
Query: 426 XXXXXXXXXXXXXXXXXSXDQLPLF 500
S ++PLF
Sbjct: 179 GAINIFATIINLRAPGMSLQRVPLF 203
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 35.1 bits (77), Expect = 0.98
Identities = 32/118 (27%), Positives = 43/118 (36%)
Frame = +3
Query: 66 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINN 245
EL P ++YN ++T H N L+PL++ + FP +N
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 246 IRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
+ F V G T YPPLS G +L I SL L G SS
Sbjct: 114 VAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGE--ELWILSLLLVGTSS 168
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 33.9 bits (74), Expect = 2.3
Identities = 25/118 (21%), Positives = 43/118 (36%)
Frame = +3
Query: 66 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINN 245
+L P + Q YN ++T H N +VPL + A + FP +N
Sbjct: 52 QLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQIGARDVSFPFLNA 110
Query: 246 IRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 419
+ F + G T Y LS + +G +D + L ++G+ +
Sbjct: 111 LGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHGIDFFVLGLQISGLGT 166
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 33.1 bits (72), Expect = 4.0
Identities = 21/57 (36%), Positives = 25/57 (43%)
Frame = +2
Query: 230 PTNK*YKILTPTPLPYIINFKKNCRKWXXNRMNSXPPTFI*YRT*RKIRRSCYFFTT 400
P NK +KIL TPL Y N C K + +NS P Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 32.7 bits (71), Expect = 5.2
Identities = 34/153 (22%), Positives = 52/153 (33%), Gaps = 1/153 (0%)
Frame = +3
Query: 66 ELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXIN 242
+L P + IG D+ YN I T H LVPL++ I FP +N
Sbjct: 57 QLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMVGTRHIAFPRLN 114
Query: 243 NIRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 422
+ V+ G G Y PLS G+ D+ + +S+
Sbjct: 115 AFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKRADIWAQMITFTEVSAL 174
Query: 423 XXXXXXXXXXXXXXXXXXSXDQLPLFX*AVGIT 521
S D++PLF ++ +T
Sbjct: 175 AIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVT 207
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 32.7 bits (71), Expect = 5.2
Identities = 29/145 (20%), Positives = 47/145 (32%)
Frame = +3
Query: 66 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPXIXFPXINN 245
+LG P + +YN + T H N +VPL++ A + FP +N
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLNA 117
Query: 246 IRFXXXXXXXXXXXXXXIVENGAXTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 425
+ V G Y PL+ VD I + L G++S
Sbjct: 118 LSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAPTAGVDYWIVGIGLTGVASIA 177
Query: 426 XXXXXXXXXXXXXXXXXSXDQLPLF 500
+ +++PLF
Sbjct: 178 GALNFIVTILNMRAPGMTLNRMPLF 202
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 314,384,453
Number of Sequences: 1657284
Number of extensions: 4173131
Number of successful extensions: 6912
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 6760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6861
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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