Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304E01f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1; ... 50 2e-05
UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_P00408 Cluster: Cytochrome c oxidase subunit 2; n=4696;... 42 0.009
UniRef50_Q94RS0 Cluster: Cytochrome c oxidase subunit 2; n=78; H... 40 0.026
UniRef50_A1INJ8 Cluster: Cytochrome c oxidase subunit 2; n=9; Ne... 40 0.046
UniRef50_Q9G839 Cluster: Cytochrome c oxidase subunit 2; n=214; ... 39 0.060
UniRef50_A7FPQ7 Cluster: Conserved domain protein; n=3; Clostrid... 35 1.3
UniRef50_A5YPB3 Cluster: Cytochrome c oxidase subunit 2; n=2; Te... 34 2.3
UniRef50_Q8LX83 Cluster: Cytochrome oxidase II; n=2; Chaoborus|R... 32 6.9
>UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1;
Thermobia domestica|Rep: Putative uncharacterized
protein - Thermobia domestica (firebrat)
Length = 53
Score = 50.4 bits (115), Expect = 2e-05
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +2
Query: 23 KKKSLRPRCWIKIKFKCRSLKF*SVRSLKSYMI 121
+++ LRPRCWIKI +CRSL + SVR LKSYMI
Sbjct: 21 RQERLRPRCWIKILSRCRSLVYRSVRPLKSYMI 53
>UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1;
Haemaphysalis qinghaiensis|Rep: Putative uncharacterized
protein - Haemaphysalis qinghaiensis
Length = 30
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1
Query: 70 M*KFKILICSIIKILHDLSSNRCEPGWFLS 159
M K K +CS +ILHDLS +RCE GWFLS
Sbjct: 1 MKKLKKEVCSTFEILHDLSLDRCESGWFLS 30
>UniRef50_P00408 Cluster: Cytochrome c oxidase subunit 2; n=4696;
Metazoa|Rep: Cytochrome c oxidase subunit 2 - Drosophila
melanogaster (Fruit fly)
Length = 228
Score = 41.9 bits (94), Expect = 0.009
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = +2
Query: 314 LQNGASPLIEQXXXXXXXXXXXXXXXXXXXXXXXXSLFFNKYINRFLLEGQIIE 475
LQ+ ASPL+EQ LFFN Y+NRFLL GQ+IE
Sbjct: 9 LQDSASPLMEQLIFFHDHALLILVMITVLVGYLMFMLFFNNYVNRFLLHGQLIE 62
>UniRef50_Q94RS0 Cluster: Cytochrome c oxidase subunit 2; n=78;
Hexapoda|Rep: Cytochrome c oxidase subunit 2 - Cheilosia
urbana
Length = 227
Score = 40.3 bits (90), Expect = 0.026
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = +2
Query: 311 NLQNGASPLIEQXXXXXXXXXXXXXXXXXXXXXXXXSLFFNKYINRFLLEGQIIE 475
NLQ+ ASPL+EQ LF+NKY NR+LL GQ IE
Sbjct: 8 NLQDSASPLMEQLTFFHDHTMLILVMITIMVGYMMFMLFYNKYNNRYLLHGQTIE 62
>UniRef50_A1INJ8 Cluster: Cytochrome c oxidase subunit 2; n=9;
Neoptera|Rep: Cytochrome c oxidase subunit 2 -
Neodexiopsis sp. 13-28.x.2001
Length = 96
Score = 39.5 bits (88), Expect = 0.046
Identities = 21/55 (38%), Positives = 24/55 (43%)
Frame = +2
Query: 311 NLQNGASPLIEQXXXXXXXXXXXXXXXXXXXXXXXXSLFFNKYINRFLLEGQIIE 475
NLQN ASP +EQ LFFN +IN F L GQ+IE
Sbjct: 8 NLQNSASPFMEQLIFFHDHIMLILIMITILVMYLMLMLFFNNFINHFFLSGQMIE 62
>UniRef50_Q9G839 Cluster: Cytochrome c oxidase subunit 2; n=214;
Mandibulata|Rep: Cytochrome c oxidase subunit 2 -
Hypoderma lineatum (Early cattle grub) (Common cattle
grub)
Length = 226
Score = 39.1 bits (87), Expect = 0.060
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +2
Query: 311 NLQNGASPLIEQXXXXXXXXXXXXXXXXXXXXXXXXSLFFNKYINRFLLEGQIIE 475
+LQ+ +SPL+EQ +LF NKY+NR+LL GQ IE
Sbjct: 8 SLQDSSSPLMEQLTFFHDHALLILVMITMLVGYLLFALFLNKYVNRYLLHGQTIE 62
>UniRef50_A7FPQ7 Cluster: Conserved domain protein; n=3; Clostridium
botulinum A|Rep: Conserved domain protein - Clostridium
botulinum (strain ATCC 19397 / Type A)
Length = 479
Score = 34.7 bits (76), Expect = 1.3
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 79 FKILICSIIKILHDLSSNRCEPGWFLSFNIYNILVRK 189
+KI IIK+++ L N CE G+ SFN YN + ++
Sbjct: 277 YKISDYRIIKLINALEDNSCEVGYHYSFNSYNSISKR 313
>UniRef50_A5YPB3 Cluster: Cytochrome c oxidase subunit 2; n=2;
Tettigoniinae|Rep: Cytochrome c oxidase subunit 2 -
Paratlanticus ussuriensis
Length = 179
Score = 33.9 bits (74), Expect = 2.3
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +2
Query: 326 ASPLIEQXXXXXXXXXXXXXXXXXXXXXXXXSLFFNKYINRFLLEGQIIE 475
ASPL+EQ SL FNK+ +R+LLEGQ IE
Sbjct: 2 ASPLMEQLIFFHDHTLFILLMITVLVAYIMGSLLFNKFTHRYLLEGQTIE 51
>UniRef50_Q8LX83 Cluster: Cytochrome oxidase II; n=2; Chaoborus|Rep:
Cytochrome oxidase II - Chaoborus albatus
Length = 90
Score = 32.3 bits (70), Expect = 6.9
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +2
Query: 314 LQNGASPLIEQXXXXXXXXXXXXXXXXXXXXXXXXSLFFNKYINRFLL 457
LQ+ ASPL+EQ LFFNKY NR+LL
Sbjct: 42 LQDSASPLMEQLNFFHDHTLLILMMITMLVGYIMFMLFFNKYTNRYLL 89
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 316,222,205
Number of Sequences: 1657284
Number of extensions: 4135369
Number of successful extensions: 6726
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6723
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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