Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS304D12f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3LWC6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.24
UniRef50_UPI000049A237 Cluster: phosphatidylinositol-glycan bios... 35 1.3
UniRef50_Q26FK8 Cluster: Hypothetical transmembrane protein; n=1... 34 1.7
UniRef50_Q98RX5 Cluster: Chromosomal region maintenance protein ... 34 2.3
UniRef50_UPI00006CD1E1 Cluster: Insect antifreeze protein; n=1; ... 33 3.0
UniRef50_Q4FKB4 Cluster: Putative uncharacterized protein; n=4; ... 33 3.0
UniRef50_Q4T7N4 Cluster: Chromosome undetermined SCAF8070, whole... 33 5.2
UniRef50_UPI00006CFB5F Cluster: hypothetical protein TTHERM_0048... 32 9.2
UniRef50_A0Q5F8 Cluster: Major facilitator superfamily (MFS) tra... 32 9.2
>UniRef50_Q3LWC6 Cluster: Putative uncharacterized protein; n=1;
Bigelowiella natans|Rep: Putative uncharacterized
protein - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 160
Score = 37.1 bits (82), Expect = 0.24
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = -1
Query: 494 LKLYIMQNLFVHKNDVIVFLYLLKVIVNILRPIVSKRYFYPLLKVAFGTKRLLKKIVWFI 315
++ Y+ QNL + K +FL L ++N +S R +Y K+ + KRL +
Sbjct: 34 IRSYVCQNLIIEKEKKFIFLNSLLSLLN----CISLREYYKNKKILYIVKRLY-FLTTIQ 88
Query: 314 LITTTVYYYYNFSNK 270
LI V YYY F N+
Sbjct: 89 LIIFRVKYYYIFKNE 103
>UniRef50_UPI000049A237 Cluster: phosphatidylinositol-glycan
biosynthesis class O protein, putative; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: phosphatidylinositol-glycan
biosynthesis class O protein, putative - Entamoeba
histolytica HM-1:IMSS
Length = 870
Score = 34.7 bits (76), Expect = 1.3
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 13/104 (12%)
Frame = -1
Query: 380 FYPLLKVAFGTKRLLKKIVWFILITTTVYYYYNFS-------NKN*PTGFY---CSFLIK 231
F LKV F K L I + +LI V Y F + T FY CSF++
Sbjct: 520 FMSFLKVPFTLKTLTTNIPFDLLIVAVVTLIYGFGQCTDSFIKEEKYTSFYVGICSFIV- 578
Query: 230 KNLFEYFQT--LP*T-MVSCYLVKNKRFHVSITSILYVCCFSYL 108
F + +T P T +V CYL+ N + V + Y+C FS +
Sbjct: 579 LTYFNWLETKQFPITELVFCYLLSNWNYLV-CQFVGYICIFSLI 621
>UniRef50_Q26FK8 Cluster: Hypothetical transmembrane protein; n=1;
Flavobacteria bacterium BBFL7|Rep: Hypothetical
transmembrane protein - Flavobacteria bacterium BBFL7
Length = 210
Score = 34.3 bits (75), Expect = 1.7
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
Frame = -1
Query: 512 IVTNITLKLYIMQNLF--VHKNDVIVFLYLLKVIVNILRPIVSKRYFYPLLKVAFGTKRL 339
+ +IT+ + + N F V ++++++F L+ ++ NI+ I +FY +K A K L
Sbjct: 39 VFLSITVVIELFANYFKRVEESNLLIFSNLVIILTNIILFI----WFYEYIKNA---KLL 91
Query: 338 LKKIVWFILITTTVYYYYNFSNKN*P-TGFYCSFLIKKNLFEYFQTLP*TMVSCYLVKNK 162
+ I +L +Y NF + + F S +I N+F Y Q L + K
Sbjct: 92 ITSISIGLLSFLINMFYQNFLFEIFYYSNFIISIIILINVFVYLQQLLNNSEVLHFKKIP 151
Query: 161 RFHVSITSILY 129
F +SI I+Y
Sbjct: 152 AFWISIAVIIY 162
>UniRef50_Q98RX5 Cluster: Chromosomal region maintenance protein CRM1;
n=1; Guillardia theta|Rep: Chromosomal region maintenance
protein CRM1 - Guillardia theta (Cryptomonas phi)
Length = 949
Score = 33.9 bits (74), Expect = 2.3
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Frame = -1
Query: 482 IMQNLFVHKNDVIVFLYLLKVIVNILRPIVSKRYFYPLLKVAFGTKRL-LKKIVWFILIT 306
+++N F ND+ +FLYL + ILR I+S + F +K+ F + L KK F L +
Sbjct: 734 LLKNFFQILNDLSIFLYL----IFILRKIISSKSF--KIKLIFNSIILGFKKFKSFSLDS 787
Query: 305 -TTVYYYYNFSNKN*PTGFYCSFL--IKKNLFEYFQTLP*TMVSCYLVKNKRFHVSITSI 135
V+++ NF + CS L KK+LF+ F L ++ K K + +++ ++
Sbjct: 788 KLRVFFFKNFLIVSSIILKKCSILSIFKKSLFKDFLILLTEIIHLGRKKEKFYVLNLINL 847
Query: 134 LYV 126
++
Sbjct: 848 TFL 850
>UniRef50_UPI00006CD1E1 Cluster: Insect antifreeze protein; n=1;
Tetrahymena thermophila SB210|Rep: Insect antifreeze
protein - Tetrahymena thermophila SB210
Length = 1195
Score = 33.5 bits (73), Expect = 3.0
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 176 NNKRPLFKATFENTRISFFLSKMNNKIQLVNFYLKNCSSNT 298
NN PL + +I FFL+ NN Q N +CS NT
Sbjct: 185 NNLTPLSSSQLCGCKIGFFLNSQNNTCQQCNRTCSSCSDNT 225
>UniRef50_Q4FKB4 Cluster: Putative uncharacterized protein; n=4;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 658
Score = 33.5 bits (73), Expect = 3.0
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = -1
Query: 383 YFYPLLKVAFGTKRLLKKIVW---FILITTTVYYYYNFSNKN*PTGFYCSFLIKKNLFEY 213
Y+Y LL + LL + + + L+ + YY K +YC+FL K + +Y
Sbjct: 541 YYYTLLPIIAHYCLLLHIMAYNVHYCLLLHIIAYYCTLWRKMCIIAYYCTFLGKMCIIDY 600
Query: 212 FQTLP*TMVSCYLVKNKRFHVSITSILYVCCF 117
+ TL TM C + F + I Y C F
Sbjct: 601 YCTLWRTM--CIIAYYYTFLGKMCIIEYYCTF 630
>UniRef50_Q4T7N4 Cluster: Chromosome undetermined SCAF8070, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF8070, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 32.7 bits (71), Expect = 5.2
Identities = 15/46 (32%), Positives = 30/46 (65%)
Frame = -2
Query: 169 RIKDSMSA*PVFCTSVVFRIYK*ILRSNFISNMKYGTKCHNYVLQI 32
R++ S+S +F S +R+YK +++S+F +N+K G+ + VL +
Sbjct: 66 RLRFSLSTGGIFDNSGQYRVYKNLIKSDFTTNLKPGSNPSSDVLTL 111
>UniRef50_UPI00006CFB5F Cluster: hypothetical protein
TTHERM_00486030; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00486030 - Tetrahymena
thermophila SB210
Length = 1568
Score = 31.9 bits (69), Expect = 9.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 333 KNSMVYFDNHNCVLLLQFFK*KLTNWILLFIFDKKKLIRVFSNVALN 193
+ ++ DN N + Q + ++N+ L+FIFD ++ F NV LN
Sbjct: 458 QGGIIAIDNRNLYNIAQKYNNSISNYDLIFIFDNSEIF--FHNVTLN 502
>UniRef50_A0Q5F8 Cluster: Major facilitator superfamily (MFS)
transport protein; n=9; Francisella tularensis|Rep:
Major facilitator superfamily (MFS) transport protein -
Francisella tularensis subsp. novicida (strain U112)
Length = 407
Score = 31.9 bits (69), Expect = 9.2
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = -1
Query: 506 TNITLKLYIMQNLFVHKNDVIVFLYLLKVIVNILRPIVSKRYFYPLLKVAFGT 348
T ITL+ I + V++F+Y++ +N L P+ S ++FY L +A T
Sbjct: 338 TPITLQGKIQGICYGFSGLVVMFIYVIFFAINYLYPLPSNKWFYILAILAVST 390
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,368,683
Number of Sequences: 1657284
Number of extensions: 9236995
Number of successful extensions: 19449
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19436
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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